RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 NBPF4Q96M43 638 aa21.2■□□□□ 0.98
ATG4B-225ENST00000494465 TWISTNBQ3B726 338 aaPredicted RBP21.19■□□□□ 0.98
ATG4B-225ENST00000494465 USHBP1Q8N6Y0 703 aa21.19■□□□□ 0.98
ATG4B-225ENST00000494465 ZNF335Q9H4Z2 1342 aaPredicted RBP21.19■□□□□ 0.98
ATG4B-225ENST00000494465 PXDNQ92626 1479 aa21.19■□□□□ 0.98
ATG4B-225ENST00000494465 RGPD5Q99666 1765 aa21.19■□□□□ 0.98
ATG4B-225ENST00000494465 ELL2O00472 640 aaPredicted RBP21.18■□□□□ 0.98
ATG4B-225ENST00000494465 MS4A1P11836 297 aa21.18■□□□□ 0.98
ATG4B-225ENST00000494465 ZBTB7CA1YPR0 619 aa21.18■□□□□ 0.98
ATG4B-225ENST00000494465 SKAP1Q86WV1 359 aa21.18■□□□□ 0.98
ATG4B-225ENST00000494465 FTSJ3Q8IY81 847 aaKnown RBP21.18■□□□□ 0.98
ATG4B-225ENST00000494465 MRPL50Q8N5N7 158 aaKnown RBP21.18■□□□□ 0.98
ATG4B-225ENST00000494465 NCAPD2Q15021 1401 aa21.18■□□□□ 0.98
ATG4B-225ENST00000494465 NPHP3Q7Z494 1330 aa21.17■□□□□ 0.98
ATG4B-225ENST00000494465 PLEKHG5O94827 1062 aa21.17■□□□□ 0.98
ATG4B-225ENST00000494465 CAMTA1Q9Y6Y1 1673 aa21.17■□□□□ 0.98
ATG4B-225ENST00000494465 HTATSF1O43719 755 aaKnown RBP21.17■□□□□ 0.98
ATG4B-225ENST00000494465 IGHDP01880 384 aa21.17■□□□□ 0.98
ATG4B-225ENST00000494465 CRYBG1Q9Y4K1 1723 aa21.17■□□□□ 0.98
ATG4B-225ENST00000494465 TCERG1O14776 1098 aaKnown RBP21.16■□□□□ 0.98
ATG4B-225ENST00000494465 RTF1Q92541 710 aaKnown RBP21.16■□□□□ 0.98
ATG4B-225ENST00000494465 IPO8O15397 1037 aaKnown RBP21.16■□□□□ 0.98
ATG4B-225ENST00000494465 AXIN2Q9Y2T1 843 aa21.15■□□□□ 0.98
ATG4B-225ENST00000494465 KIAA0232Q92628 1395 aa21.15■□□□□ 0.98
ATG4B-225ENST00000494465 TNS3Q68CZ2 1445 aa21.15■□□□□ 0.98
ATG4B-225ENST00000494465 LRRC59Q96AG4 307 aaKnown RBP21.15■□□□□ 0.98
ATG4B-225ENST00000494465 PCDHB15Q9Y5E8 787 aa21.15■□□□□ 0.98
ATG4B-225ENST00000494465 GNAT3A8MTJ3 354 aa21.14■□□□□ 0.97
ATG4B-225ENST00000494465 KRT24Q2M2I5 525 aa21.14■□□□□ 0.97
ATG4B-225ENST00000494465 MAP3K5Q99683 1374 aa21.14■□□□□ 0.97
ATG4B-225ENST00000494465 BRINP3Q76B58 766 aa21.13■□□□□ 0.97
ATG4B-225ENST00000494465 COL18A1P39060 1754 aa21.13■□□□□ 0.97
ATG4B-225ENST00000494465 TMEM57Q8N5G2 664 aa21.12■□□□□ 0.97
ATG4B-225ENST00000494465 ARHGAP45Q92619 1136 aa21.12■□□□□ 0.97
ATG4B-225ENST00000494465 ANKRD24Q8TF21 1146 aa21.12■□□□□ 0.97
ATG4B-225ENST00000494465 MIS18AQ9NYP9 233 aa21.12■□□□□ 0.97
ATG4B-225ENST00000494465 IL17REQ8NFR9 667 aa21.11■□□□□ 0.97
ATG4B-225ENST00000494465 SPATA31A3Q5VYP0 1347 aa21.11■□□□□ 0.97
ATG4B-225ENST00000494465 LMO7Q8WWI1 1683 aa21.11■□□□□ 0.97
ATG4B-225ENST00000494465 ZC3H6P61129 1189 aaKnown RBP21.1■□□□□ 0.97
ATG4B-225ENST00000494465 DDX19BQ9UMR2 479 aa21.1■□□□□ 0.97
ATG4B-225ENST00000494465 ITPRIPQ8IWB1 547 aa21.1■□□□□ 0.97
ATG4B-225ENST00000494465 TSPYL4Q9UJ04 414 aa21.09■□□□□ 0.97
ATG4B-225ENST00000494465 ERBB3P21860 1342 aa21.08■□□□□ 0.96
ATG4B-225ENST00000494465 CEMIPQ8WUJ3 1361 aa21.07■□□□□ 0.96
ATG4B-225ENST00000494465 CABLES1Q8TDN4 633 aa21.07■□□□□ 0.96
ATG4B-225ENST00000494465 SLAIN2Q9P270 581 aa21.07■□□□□ 0.96
ATG4B-225ENST00000494465 ABCC4O15439 1325 aa21.06■□□□□ 0.96
ATG4B-225ENST00000494465 ZBTB40Q9NUA8 1239 aa21.06■□□□□ 0.96
ATG4B-225ENST00000494465 VIRMAQ69YN4 1812 aaKnown RBP21.06■□□□□ 0.96
ATG4B-225ENST00000494465 HAP1P54257 671 aaPredicted RBP21.05■□□□□ 0.96
ATG4B-225ENST00000494465 ABCC6O95255 1503 aa21.05■□□□□ 0.96
ATG4B-225ENST00000494465 FAM208AQ9UK61 1670 aaKnown RBP21.04■□□□□ 0.96
ATG4B-225ENST00000494465 SOS2Q07890 1332 aaPredicted RBP21.04■□□□□ 0.96
ATG4B-225ENST00000494465 BABAM1Q9NWV8 329 aa21.03■□□□□ 0.96
ATG4B-225ENST00000494465 RGS12O14924 1447 aa21.03■□□□□ 0.96
ATG4B-225ENST00000494465 TAF7Q15545 349 aaPredicted RBP21.02■□□□□ 0.96
ATG4B-225ENST00000494465 PDE4AP27815 886 aa21.02■□□□□ 0.96
ATG4B-225ENST00000494465 PLEKHO1Q53GL0 409 aaPredicted RBP21.02■□□□□ 0.96
ATG4B-225ENST00000494465 CPDO75976 1380 aa21.02■□□□□ 0.96
ATG4B-225ENST00000494465 AMOTQ4VCS5 1084 aa21.01■□□□□ 0.95
ATG4B-225ENST00000494465 API5Q9BZZ5 524 aaKnown RBP21.01■□□□□ 0.95
ATG4B-225ENST00000494465 RWDD1Q9H446 243 aaPredicted RBP21.01■□□□□ 0.95
ATG4B-225ENST00000494465 KDM3BQ7LBC6 1761 aa21.01■□□□□ 0.95
ATG4B-225ENST00000494465 ZBTB7BO15156 539 aaPredicted RBP21.01■□□□□ 0.95
ATG4B-225ENST00000494465 AKAP4Q5JQC9 854 aa21.01■□□□□ 0.95
ATG4B-225ENST00000494465 BACH2Q9BYV9 841 aa21.01■□□□□ 0.95
ATG4B-225ENST00000494465 LGR6Q9HBX8 967 aa21.01■□□□□ 0.95
ATG4B-225ENST00000494465 ZNF530Q6P9A1 599 aaPredicted RBP21■□□□□ 0.95
ATG4B-225ENST00000494465 NHSL1Q5SYE7 1610 aa21■□□□□ 0.95
ATG4B-225ENST00000494465 HDAC1Q13547 482 aaPredicted RBP20.99■□□□□ 0.95
ATG4B-225ENST00000494465 ADAMTS7Q9UKP4 1686 aa20.98■□□□□ 0.95
ATG4B-225ENST00000494465 ABCA3Q99758 1704 aa20.98■□□□□ 0.95
ATG4B-225ENST00000494465 CHRNA2Q15822 529 aa20.98■□□□□ 0.95
ATG4B-225ENST00000494465 RGS3P49796 1198 aa20.97■□□□□ 0.95
ATG4B-225ENST00000494465 CACNA1FO60840 1977 aa20.97■□□□□ 0.95
ATG4B-225ENST00000494465 PTPRCP08575 1304 aa20.96■□□□□ 0.95
ATG4B-225ENST00000494465 OVOS2A0A0G2JMS6 1433 aa20.96■□□□□ 0.95
ATG4B-225ENST00000494465 SIPA1L3O60292 1781 aaPredicted RBP20.96■□□□□ 0.95
ATG4B-225ENST00000494465 SLC4A2P04920 1241 aa20.96■□□□□ 0.95
ATG4B-225ENST00000494465 SOS1Q07889 1333 aaPredicted RBP20.95■□□□□ 0.94
ATG4B-225ENST00000494465 INTS3Q68E01 1043 aaKnown RBP20.95■□□□□ 0.94
ATG4B-225ENST00000494465 MPRIPQ6WCQ1 1025 aa20.95■□□□□ 0.94
ATG4B-225ENST00000494465 NLRP2Q9NX02 1062 aa20.95■□□□□ 0.94
ATG4B-225ENST00000494465 PDZRN3Q9UPQ7 1066 aa20.94■□□□□ 0.94
ATG4B-225ENST00000494465 RNMTO43148 476 aaKnown RBP20.94■□□□□ 0.94
ATG4B-225ENST00000494465 MEGF6O75095 1541 aa20.93■□□□□ 0.94
ATG4B-225ENST00000494465 C1orf141Q5JVX7 400 aa20.93■□□□□ 0.94
ATG4B-225ENST00000494465 G2E3Q7L622 706 aa20.93■□□□□ 0.94
ATG4B-225ENST00000494465 CHMP4BQ9H444 224 aaKnown RBP20.93■□□□□ 0.94
ATG4B-225ENST00000494465 EIF4A1P60842 406 aaKnown RBP20.91■□□□□ 0.94
ATG4B-225ENST00000494465 SMC5Q8IY18 1101 aa20.91■□□□□ 0.94
ATG4B-225ENST00000494465 SCN11AQ9UI33 1791 aa20.91■□□□□ 0.94
ATG4B-225ENST00000494465 C8orf34Q49A92 452 aa20.9■□□□□ 0.94
ATG4B-225ENST00000494465 CCDC30Q5VVM6 783 aa20.9■□□□□ 0.94
ATG4B-225ENST00000494465 RAPGEF4Q8WZA2 1011 aa20.9■□□□□ 0.94
ATG4B-225ENST00000494465 PKD1L3Q7Z443 1732 aa20.9■□□□□ 0.94
ATG4B-225ENST00000494465 TEFQ10587 303 aa20.9■□□□□ 0.94
ATG4B-225ENST00000494465 C1orf115Q9H7X2 142 aa20.9■□□□□ 0.94
ATG4B-225ENST00000494465 PLEKHG2Q9H7P9 1386 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms