RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 R3HDM1Q15032 1099 aaKnown RBP18.1■□□□□ 0.49
ERCC3-209ENST00000494464 POLKQ9UBT6 870 aa18.09■□□□□ 0.49
ERCC3-209ENST00000494464 KCNQ2O43526 872 aa18.08■□□□□ 0.49
ERCC3-209ENST00000494464 NBPF14Q5TI25 921 aa18.08■□□□□ 0.49
ERCC3-209ENST00000494464 USHBP1Q8N6Y0 703 aa18.08■□□□□ 0.49
ERCC3-209ENST00000494464 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.49
ERCC3-209ENST00000494464 RAPGEF4Q8WZA2 1011 aa18.08■□□□□ 0.49
ERCC3-209ENST00000494464 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
ERCC3-209ENST00000494464 ACSBG1Q96GR2 724 aa18.07■□□□□ 0.48
ERCC3-209ENST00000494464 PAPPAQ13219 1627 aa18.07■□□□□ 0.48
ERCC3-209ENST00000494464 TATP17735 454 aaPredicted RBP18.06■□□□□ 0.48
ERCC3-209ENST00000494464 DDX54Q8TDD1 881 aaKnown RBP18.06■□□□□ 0.48
ERCC3-209ENST00000494464 KNSTRNQ9Y448 316 aa18.06■□□□□ 0.48
ERCC3-209ENST00000494464 PLEKHG2Q9H7P9 1386 aa18.06■□□□□ 0.48
ERCC3-209ENST00000494464 CASZ1Q86V15 1759 aa18.05■□□□□ 0.48
ERCC3-209ENST00000494464 TXNRD1Q16881 649 aa18.04■□□□□ 0.48
ERCC3-209ENST00000494464 PROM2Q8N271 834 aa18.04■□□□□ 0.48
ERCC3-209ENST00000494464 PCDH11XQ9BZA7 1347 aa18.04■□□□□ 0.48
ERCC3-209ENST00000494464 PCDH11YQ9BZA8 1340 aa18.04■□□□□ 0.48
ERCC3-209ENST00000494464 LY75O60449 1722 aa18.04■□□□□ 0.48
ERCC3-209ENST00000494464 TNNT2P45379 298 aaPredicted RBP18.04■□□□□ 0.48
ERCC3-209ENST00000494464 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
ERCC3-209ENST00000494464 TOGARAM1Q9Y4F4 1720 aa18.03■□□□□ 0.48
ERCC3-209ENST00000494464 KAT6BQ8WYB5 2073 aa18.03■□□□□ 0.48
ERCC3-209ENST00000494464 MORC1Q86VD1 984 aa18.03■□□□□ 0.48
ERCC3-209ENST00000494464 ANO8Q9HCE9 1232 aaPredicted RBP18.03■□□□□ 0.48
ERCC3-209ENST00000494464 EIF4A2Q14240 407 aaKnown RBP18.02■□□□□ 0.47
ERCC3-209ENST00000494464 ZNF316A6NFI3 1004 aaPredicted RBP18.01■□□□□ 0.47
ERCC3-209ENST00000494464 EYA1Q99502 592 aa18.01■□□□□ 0.47
ERCC3-209ENST00000494464 PER1O15534 1290 aaPredicted RBP18■□□□□ 0.47
ERCC3-209ENST00000494464 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
ERCC3-209ENST00000494464 NPC1L1Q9UHC9 1359 aa18■□□□□ 0.47
ERCC3-209ENST00000494464 QSER1Q2KHR3 1735 aa17.98■□□□□ 0.47
ERCC3-209ENST00000494464 ITGB4P16144 1822 aa17.98■□□□□ 0.47
ERCC3-209ENST00000494464 PRIM1P49642 420 aaKnown RBP17.98■□□□□ 0.47
ERCC3-209ENST00000494464 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.98■□□□□ 0.473e-6■■■□□ 15.8
ERCC3-209ENST00000494464 CYP27B1O15528 508 aa17.97■□□□□ 0.47
ERCC3-209ENST00000494464 SYTL4Q96C24 671 aaPredicted RBP17.97■□□□□ 0.47
ERCC3-209ENST00000494464 STK32BQ9NY57 414 aa17.96■□□□□ 0.47
ERCC3-209ENST00000494464 SPG7Q9UQ90 795 aa17.96■□□□□ 0.47
ERCC3-209ENST00000494464 SLC15A2Q16348 729 aa17.95■□□□□ 0.46
ERCC3-209ENST00000494464 SLC27A3Q5K4L6 730 aa17.95■□□□□ 0.46
ERCC3-209ENST00000494464 NKX1-1Q15270 411 aaPredicted RBP17.94■□□□□ 0.46
ERCC3-209ENST00000494464 LRRC4BQ9NT99 713 aa17.93■□□□□ 0.46
ERCC3-209ENST00000494464 KDRP35968 1356 aa17.93■□□□□ 0.46
ERCC3-209ENST00000494464 TUBGCP6Q96RT7 1819 aa17.93■□□□□ 0.46
ERCC3-209ENST00000494464 C5P01031 1676 aa17.92■□□□□ 0.46
ERCC3-209ENST00000494464 SPON1Q9HCB6 807 aa17.91■□□□□ 0.46
ERCC3-209ENST00000494464 TAF1LQ8IZX4 1826 aa17.9■□□□□ 0.46
ERCC3-209ENST00000494464 PHKG2P15735 406 aa17.9■□□□□ 0.46
ERCC3-209ENST00000494464 IL13P35225 146 aa17.9■□□□□ 0.46
ERCC3-209ENST00000494464 ZNF827Q17R98 1081 aa17.9■□□□□ 0.46
ERCC3-209ENST00000494464 CC2D1BQ5T0F9 858 aaKnown RBP17.9■□□□□ 0.46
ERCC3-209ENST00000494464 IFNL2Q8IZJ0 200 aa17.9■□□□□ 0.46
ERCC3-209ENST00000494464 COL3A1P02461 1466 aaPredicted RBP17.89■□□□□ 0.45
ERCC3-209ENST00000494464 MTHFSP49914 203 aa17.89■□□□□ 0.45
ERCC3-209ENST00000494464 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
ERCC3-209ENST00000494464 AKT1S1Q96B36 256 aa17.88■□□□□ 0.45
ERCC3-209ENST00000494464 PDGFDQ9GZP0 370 aaPredicted RBP17.88■□□□□ 0.45
ERCC3-209ENST00000494464 MPRIPQ6WCQ1 1025 aa17.87■□□□□ 0.45
ERCC3-209ENST00000494464 AEBP1Q8IUX7 1158 aa17.87■□□□□ 0.45
ERCC3-209ENST00000494464 CCNL1Q9UK58 526 aaPredicted RBP17.87■□□□□ 0.45
ERCC3-209ENST00000494464 COL24A1Q17RW2 1714 aa17.87■□□□□ 0.45
ERCC3-209ENST00000494464 AMOTQ4VCS5 1084 aa17.86■□□□□ 0.45
ERCC3-209ENST00000494464 PLEKHO1Q53GL0 409 aaPredicted RBP17.86■□□□□ 0.45
ERCC3-209ENST00000494464 HMGB2P26583 209 aaKnown RBP17.85■□□□□ 0.45
ERCC3-209ENST00000494464 SULT6B1Q6IMI4 303 aa17.85■□□□□ 0.45
ERCC3-209ENST00000494464 SMARCC1Q92922 1105 aaPredicted RBP17.85■□□□□ 0.45
ERCC3-209ENST00000494464 KDM6AO15550 1401 aaPredicted RBP17.85■□□□□ 0.45
ERCC3-209ENST00000494464 ZNF831Q5JPB2 1677 aa17.84■□□□□ 0.45
ERCC3-209ENST00000494464 HSP90AB1P08238 724 aaKnown RBP17.84■□□□□ 0.45
ERCC3-209ENST00000494464 PIGBQ92521 554 aa17.84■□□□□ 0.45
ERCC3-209ENST00000494464 MTFR1LQ9H019 292 aa17.84■□□□□ 0.45
ERCC3-209ENST00000494464 C4BP0C0L5 1744 aa17.84■□□□□ 0.45
ERCC3-209ENST00000494464 SCN11AQ9UI33 1791 aa17.84■□□□□ 0.45
ERCC3-209ENST00000494464 ZBTB7AO95365 584 aa17.83■□□□□ 0.45
ERCC3-209ENST00000494464 KCNQ4P56696 695 aa17.83■□□□□ 0.45
ERCC3-209ENST00000494464 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.45
ERCC3-209ENST00000494464 TMOD3Q9NYL9 352 aa17.83■□□□□ 0.45
ERCC3-209ENST00000494464 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
ERCC3-209ENST00000494464 PTGER2P43116 358 aa17.82■□□□□ 0.44
ERCC3-209ENST00000494464 ZNF530Q6P9A1 599 aaPredicted RBP17.82■□□□□ 0.44
ERCC3-209ENST00000494464 DCAF5Q96JK2 942 aa17.82■□□□□ 0.44
ERCC3-209ENST00000494464 PPP1R1BQ9UD71 204 aaPredicted RBP17.82■□□□□ 0.44
ERCC3-209ENST00000494464 PNPLA7Q6ZV29 1317 aa17.82■□□□□ 0.44
ERCC3-209ENST00000494464 ERVV-2B6SEH9 535 aa17.81■□□□□ 0.44
ERCC3-209ENST00000494464 VIRMAQ69YN4 1812 aaKnown RBP17.81■□□□□ 0.44
ERCC3-209ENST00000494464 SLC16A10Q8TF71 515 aa17.8■□□□□ 0.44
ERCC3-209ENST00000494464 SGIP1Q9BQI5 828 aa17.8■□□□□ 0.44
ERCC3-209ENST00000494464 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
ERCC3-209ENST00000494464 C1orf141Q5JVX7 400 aa17.79■□□□□ 0.44
ERCC3-209ENST00000494464 TFCP2L1Q9NZI6 479 aa17.79■□□□□ 0.44
ERCC3-209ENST00000494464 UBR3Q6ZT12 1888 aa17.79■□□□□ 0.44
ERCC3-209ENST00000494464 CICQ96RK0 1608 aaPredicted RBP17.79■□□□□ 0.44
ERCC3-209ENST00000494464 MRC1P22897 1456 aa17.79■□□□□ 0.44
ERCC3-209ENST00000494464 ATF5Q9Y2D1 282 aaPredicted RBP17.79■□□□□ 0.44
ERCC3-209ENST00000494464 COL5A3P25940 1745 aaPredicted RBP17.78■□□□□ 0.44
ERCC3-209ENST00000494464 LOC102724428A0A0B4J2F2 783 aa17.77■□□□□ 0.43
ERCC3-209ENST00000494464 HMOX1P09601 288 aa17.77■□□□□ 0.43
ERCC3-209ENST00000494464 SIK1P57059 783 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms