RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
GPATCH4-207ENST00000494414 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
GPATCH4-207ENST00000494414 INSRP06213 1382 aa11.58□□□□□ -0.56
GPATCH4-207ENST00000494414 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
GPATCH4-207ENST00000494414 SEPT12Q8IYM1 358 aa11.58□□□□□ -0.56
GPATCH4-207ENST00000494414 COG3Q96JB2 828 aa11.58□□□□□ -0.56
GPATCH4-207ENST00000494414 CGNL1Q0VF96 1302 aa11.58□□□□□ -0.56
GPATCH4-207ENST00000494414 NUP188Q5SRE5 1749 aa11.57□□□□□ -0.56
GPATCH4-207ENST00000494414 FLT4P35916 1363 aa11.57□□□□□ -0.56
GPATCH4-207ENST00000494414 IP6K1Q92551 441 aa11.57□□□□□ -0.56
GPATCH4-207ENST00000494414 CARD10Q9BWT7 1032 aa11.57□□□□□ -0.56
GPATCH4-207ENST00000494414 PLEKHG2Q9H7P9 1386 aa11.56□□□□□ -0.56
GPATCH4-207ENST00000494414 PER1O15534 1290 aaPredicted RBP11.56□□□□□ -0.56
GPATCH4-207ENST00000494414 FAM98CQ17RN3 349 aaKnown RBP11.56□□□□□ -0.56
GPATCH4-207ENST00000494414 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
GPATCH4-207ENST00000494414 TCP11L2Q8N4U5 519 aa11.56□□□□□ -0.56
GPATCH4-207ENST00000494414 GGNBP2Q9H3C7 697 aa11.56□□□□□ -0.56
GPATCH4-207ENST00000494414 MEGF6O75095 1541 aa11.55□□□□□ -0.56
GPATCH4-207ENST00000494414 DOT1LQ8TEK3 1739 aa11.55□□□□□ -0.56
GPATCH4-207ENST00000494414 TOGARAM1Q9Y4F4 1720 aa11.55□□□□□ -0.56
GPATCH4-207ENST00000494414 HOXC9P31274 260 aa11.55□□□□□ -0.56
GPATCH4-207ENST00000494414 COL3A1P02461 1466 aaPredicted RBP11.55□□□□□ -0.56
GPATCH4-207ENST00000494414 OVOS2A0A0G2JMS6 1433 aa11.54□□□□□ -0.56
GPATCH4-207ENST00000494414 KRT27Q7Z3Y8 459 aa11.54□□□□□ -0.56
GPATCH4-207ENST00000494414 PANK3Q9H999 370 aa11.54□□□□□ -0.56
GPATCH4-207ENST00000494414 STRN4Q9NRL3 753 aa11.54□□□□□ -0.56
GPATCH4-207ENST00000494414 FARP1Q9Y4F1 1045 aaPredicted RBP11.54□□□□□ -0.56
GPATCH4-207ENST00000494414 CDCA7Q9BWT1 371 aaPredicted RBP11.53□□□□□ -0.56
GPATCH4-207ENST00000494414 BTAF1O14981 1849 aa11.53□□□□□ -0.56
GPATCH4-207ENST00000494414 PAPPAQ13219 1627 aa11.53□□□□□ -0.56
GPATCH4-207ENST00000494414 LY75O60449 1722 aa11.52□□□□□ -0.56
GPATCH4-207ENST00000494414 ANKRD24Q8TF21 1146 aa11.52□□□□□ -0.57
GPATCH4-207ENST00000494414 ADAMTS7Q9UKP4 1686 aa11.52□□□□□ -0.57
GPATCH4-207ENST00000494414 SOX12O15370 315 aa11.51□□□□□ -0.57
GPATCH4-207ENST00000494414 FBLN1P23142 703 aa11.51□□□□□ -0.57
GPATCH4-207ENST00000494414 CCDC125Q86Z20 511 aa11.51□□□□□ -0.57
GPATCH4-207ENST00000494414 CCDC9Q9Y3X0 531 aaKnown RBP11.51□□□□□ -0.57
GPATCH4-207ENST00000494414 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
GPATCH4-207ENST00000494414 EVA1CP58658 441 aa11.5□□□□□ -0.57
GPATCH4-207ENST00000494414 RRS1Q15050 365 aaKnown RBP11.5□□□□□ -0.57
GPATCH4-207ENST00000494414 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
GPATCH4-207ENST00000494414 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
GPATCH4-207ENST00000494414 ITGB4P16144 1822 aa11.5□□□□□ -0.57
GPATCH4-207ENST00000494414 QSER1Q2KHR3 1735 aa11.49□□□□□ -0.57
GPATCH4-207ENST00000494414 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
GPATCH4-207ENST00000494414 TOM1L2Q6ZVM7 507 aa11.49□□□□□ -0.57
GPATCH4-207ENST00000494414 EMILIN1Q9Y6C2 1016 aa11.49□□□□□ -0.57
GPATCH4-207ENST00000494414 PARD3Q8TEW0 1356 aa11.48□□□□□ -0.57
GPATCH4-207ENST00000494414 CICQ96RK0 1608 aaPredicted RBP11.47□□□□□ -0.57
GPATCH4-207ENST00000494414 KDRP35968 1356 aa11.47□□□□□ -0.57
GPATCH4-207ENST00000494414 HSP90AB2PQ58FF8 381 aa11.47□□□□□ -0.57
GPATCH4-207ENST00000494414 POTEHQ6S545 545 aa11.47□□□□□ -0.57
GPATCH4-207ENST00000494414 ZNF831Q5JPB2 1677 aa11.46□□□□□ -0.57
GPATCH4-207ENST00000494414 IGSF1Q8N6C5 1336 aa11.46□□□□□ -0.57
GPATCH4-207ENST00000494414 ZBTB7CA1YPR0 619 aa11.46□□□□□ -0.57
GPATCH4-207ENST00000494414 FAM196AQ6ZSG2 479 aa11.46□□□□□ -0.57
GPATCH4-207ENST00000494414 MARCH10Q8NA82 808 aaPredicted RBP11.46□□□□□ -0.57
GPATCH4-207ENST00000494414 YTHDC1Q96MU7 727 aaKnown RBP11.46□□□□□ -0.57
GPATCH4-207ENST00000494414 USP35Q9P2H5 1018 aa11.46□□□□□ -0.57
GPATCH4-207ENST00000494414 CASZ1Q86V15 1759 aa11.46□□□□□ -0.58
GPATCH4-207ENST00000494414 LRP5O75197 1615 aa11.46□□□□□ -0.58
GPATCH4-207ENST00000494414 IL2RBP14784 551 aa11.45□□□□□ -0.58
GPATCH4-207ENST00000494414 AMPHP49418 695 aa11.45□□□□□ -0.58
GPATCH4-207ENST00000494414 DDB1Q16531 1140 aa11.45□□□□□ -0.58
GPATCH4-207ENST00000494414 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
GPATCH4-207ENST00000494414 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
GPATCH4-207ENST00000494414 SCN11AQ9UI33 1791 aa11.45□□□□□ -0.58
GPATCH4-207ENST00000494414 COL24A1Q17RW2 1714 aa11.45□□□□□ -0.58
GPATCH4-207ENST00000494414 TUBGCP6Q96RT7 1819 aa11.44□□□□□ -0.58
GPATCH4-207ENST00000494414 CSB-PGBD3P0DP91 1061 aa11.44□□□□□ -0.58
GPATCH4-207ENST00000494414 KNSTRNQ9Y448 316 aa11.44□□□□□ -0.58
GPATCH4-207ENST00000494414 TAF1LQ8IZX4 1826 aa11.44□□□□□ -0.58
GPATCH4-207ENST00000494414 POLR3GLQ9BT43 218 aa11.43□□□□□ -0.58
GPATCH4-207ENST00000494414 NLRP2Q9NX02 1062 aa11.43□□□□□ -0.58
GPATCH4-207ENST00000494414 SIPA1L3O60292 1781 aaPredicted RBP11.43□□□□□ -0.58
GPATCH4-207ENST00000494414 EIF4A2Q14240 407 aaKnown RBP11.42□□□□□ -0.58
GPATCH4-207ENST00000494414 FAM182BQ5T319 152 aa11.42□□□□□ -0.58
GPATCH4-207ENST00000494414 MRC1P22897 1456 aa11.42□□□□□ -0.58
GPATCH4-207ENST00000494414 PDE3BQ13370 1112 aa11.41□□□□□ -0.58
GPATCH4-207ENST00000494414 EYA1Q99502 592 aa11.41□□□□□ -0.58
GPATCH4-207ENST00000494414 A0A0G2JS52 829 aa11.4□□□□□ -0.58
GPATCH4-207ENST00000494414 MORC1Q86VD1 984 aa11.4□□□□□ -0.58
GPATCH4-207ENST00000494414 CAMKK2Q96RR4 588 aa11.4□□□□□ -0.58
GPATCH4-207ENST00000494414 C5P01031 1676 aa11.4□□□□□ -0.59
GPATCH4-207ENST00000494414 UBR2Q8IWV8 1755 aa11.39□□□□□ -0.59
GPATCH4-207ENST00000494414 EXOC5O00471 708 aa11.39□□□□□ -0.59
GPATCH4-207ENST00000494414 COL5A3P25940 1745 aaPredicted RBP11.39□□□□□ -0.59
GPATCH4-207ENST00000494414 IL13P35225 146 aa11.39□□□□□ -0.59
GPATCH4-207ENST00000494414 DEFB132Q7Z7B7 95 aa11.39□□□□□ -0.59
GPATCH4-207ENST00000494414 LTV1Q96GA3 475 aaPredicted RBP11.39□□□□□ -0.59
GPATCH4-207ENST00000494414 BCL11BQ9C0K0 894 aaPredicted RBP11.39□□□□□ -0.59
GPATCH4-207ENST00000494414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.59
GPATCH4-207ENST00000494414 HAX1O00165 279 aa11.38□□□□□ -0.59
GPATCH4-207ENST00000494414 PLSCR1O15162 318 aa11.38□□□□□ -0.59
GPATCH4-207ENST00000494414 BAG6P46379 1132 aa11.38□□□□□ -0.59
GPATCH4-207ENST00000494414 NUBP1P53384 320 aa11.38□□□□□ -0.59
GPATCH4-207ENST00000494414 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
GPATCH4-207ENST00000494414 PTF1AQ7RTS3 328 aa11.38□□□□□ -0.59
GPATCH4-207ENST00000494414 USHBP1Q8N6Y0 703 aa11.38□□□□□ -0.59
GPATCH4-207ENST00000494414 PCDH11XQ9BZA7 1347 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms