RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 USP17L2Q6R6M4 530 aa11.45□□□□□ -0.58
MSL3-217ENST00000494268 USP17L1Q7RTZ2 530 aa11.45□□□□□ -0.58
MSL3-217ENST00000494268 CCDC82Q8N4S0 544 aa11.45□□□□□ -0.58
MSL3-217ENST00000494268 MEIOBQ8N635 442 aa11.45□□□□□ -0.58
MSL3-217ENST00000494268 LMOD1P29536 600 aaPredicted RBP11.44□□□□□ -0.58
MSL3-217ENST00000494268 TRIM46Q7Z4K8 759 aa11.44□□□□□ -0.58
MSL3-217ENST00000494268 ESF1Q9H501 851 aaKnown RBP11.44□□□□□ -0.58
MSL3-217ENST00000494268 MYCP01106 439 aaPredicted RBP11.43□□□□□ -0.58
MSL3-217ENST00000494268 RFX1P22670 979 aa11.43□□□□□ -0.58
MSL3-217ENST00000494268 RELBQ01201 579 aa11.43□□□□□ -0.58
MSL3-217ENST00000494268 EML3Q32P44 896 aa11.43□□□□□ -0.58
MSL3-217ENST00000494268 MRPL14Q6P1L8 145 aaKnown RBP11.43□□□□□ -0.58
MSL3-217ENST00000494268 CCDC97Q96F63 343 aaPredicted RBP11.43□□□□□ -0.58
MSL3-217ENST00000494268 ADH1AP07327 375 aa11.42□□□□□ -0.58
MSL3-217ENST00000494268 PLEKHM2Q8IWE5 1019 aa11.42□□□□□ -0.58
MSL3-217ENST00000494268 ZNF395Q9H8N7 513 aaPredicted RBP11.42□□□□□ -0.58
MSL3-217ENST00000494268 ATP13A2Q9NQ11 1180 aa11.42□□□□□ -0.58
MSL3-217ENST00000494268 SERPINA10Q9UK55 444 aa11.42□□□□□ -0.58
MSL3-217ENST00000494268 LZTS3O60299 673 aaPredicted RBP11.41□□□□□ -0.58
MSL3-217ENST00000494268 STAU1O95793 577 aaKnown RBP11.41□□□□□ -0.58
MSL3-217ENST00000494268 C6orf118Q5T5N4 469 aa11.41□□□□□ -0.58
MSL3-217ENST00000494268 LINC00528Q8N1L1 170 aa11.4□□□□□ -0.58
MSL3-217ENST00000494268 TRIM52Q96A61 297 aa11.4□□□□□ -0.58
MSL3-217ENST00000494268 PURBQ96QR8 312 aaKnown RBP11.4□□□□□ -0.58
MSL3-217ENST00000494268 TSEN34Q9BSV6 310 aaKnown RBP11.4□□□□□ -0.58
MSL3-217ENST00000494268 MKRN1Q9UHC7 482 aaKnown RBP11.4□□□□□ -0.58
MSL3-217ENST00000494268 NOD1Q9Y239 953 aa11.4□□□□□ -0.58
MSL3-217ENST00000494268 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
MSL3-217ENST00000494268 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
MSL3-217ENST00000494268 SIRT1Q96EB6 747 aa11.39□□□□□ -0.59
MSL3-217ENST00000494268 ZFP42Q96MM3 310 aa11.39□□□□□ -0.59
MSL3-217ENST00000494268 PCDHGA11Q9Y5H2 935 aa11.39□□□□□ -0.59
MSL3-217ENST00000494268 BMP2P12643 396 aa11.38□□□□□ -0.59
MSL3-217ENST00000494268 PTGIRP43119 386 aa11.38□□□□□ -0.59
MSL3-217ENST00000494268 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
MSL3-217ENST00000494268 ARID3AQ99856 593 aa11.38□□□□□ -0.59
MSL3-217ENST00000494268 UPP2O95045 317 aa11.37□□□□□ -0.59
MSL3-217ENST00000494268 CYP2U1Q7Z449 544 aa11.37□□□□□ -0.59
MSL3-217ENST00000494268 A0A1W2PRU2 124 aa11.36□□□□□ -0.59
MSL3-217ENST00000494268 POTECB2RU33 542 aa11.36□□□□□ -0.59
MSL3-217ENST00000494268 GTF2IP78347 998 aa11.36□□□□□ -0.59
MSL3-217ENST00000494268 ARHGEF10LQ9HCE6 1279 aa11.36□□□□□ -0.59
MSL3-217ENST00000494268 RAB6BQ9NRW1 208 aa11.36□□□□□ -0.59
MSL3-217ENST00000494268 GMPR2Q9P2T1 348 aaKnown RBP11.36□□□□□ -0.59
MSL3-217ENST00000494268 ZBTB7BO15156 539 aaPredicted RBP11.35□□□□□ -0.59
MSL3-217ENST00000494268 CLDN10P78369 228 aa11.35□□□□□ -0.59
MSL3-217ENST00000494268 SCARF1Q14162 830 aa11.35□□□□□ -0.59
MSL3-217ENST00000494268 INSM2Q96T92 566 aaPredicted RBP11.35□□□□□ -0.59
MSL3-217ENST00000494268 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.34□□□□□ -0.59
MSL3-217ENST00000494268 SPINT1O43278 529 aa11.34□□□□□ -0.59
MSL3-217ENST00000494268 VRTNQ9H8Y1 702 aa11.34□□□□□ -0.59
MSL3-217ENST00000494268 GNRH1P01148 92 aa11.33□□□□□ -0.6
MSL3-217ENST00000494268 CTSOP43234 321 aaPredicted RBP11.33□□□□□ -0.6
MSL3-217ENST00000494268 SRPK2P78362 688 aaKnown RBP11.33□□□□□ -0.6
MSL3-217ENST00000494268 OGFOD1Q8N543 542 aa11.33□□□□□ -0.6
MSL3-217ENST00000494268 ETNK1Q9HBU6 452 aa11.33□□□□□ -0.6
MSL3-217ENST00000494268 KIAA1024Q9UPX6 916 aa11.33□□□□□ -0.6
MSL3-217ENST00000494268 MEN1O00255 615 aa11.32□□□□□ -0.6
MSL3-217ENST00000494268 RASA1P20936 1047 aa11.32□□□□□ -0.6
MSL3-217ENST00000494268 SCNN1DP51172 638 aa11.32□□□□□ -0.6
MSL3-217ENST00000494268 TRIM50Q86XT4 487 aa11.32□□□□□ -0.6
MSL3-217ENST00000494268 IL2RAP01589 272 aa11.31□□□□□ -0.6
MSL3-217ENST00000494268 PSME1Q06323 249 aa11.31□□□□□ -0.6
MSL3-217ENST00000494268 ZNF594Q96JF6 807 aaPredicted RBP11.31□□□□□ -0.6
MSL3-217ENST00000494268 DNAAF2Q9NVR5 837 aaKnown RBP11.31□□□□□ -0.6
MSL3-217ENST00000494268 TMEM229AB2RXF0 380 aa11.3□□□□□ -0.6
MSL3-217ENST00000494268 CRTC2Q53ET0 693 aaPredicted RBP11.3□□□□□ -0.6
MSL3-217ENST00000494268 CNKSR1Q969H4 720 aa11.3□□□□□ -0.6
MSL3-217ENST00000494268 XAGE2Q96GT9 111 aa11.3□□□□□ -0.6
MSL3-217ENST00000494268 POLMQ9NP87 494 aaPredicted RBP11.3□□□□□ -0.6
MSL3-217ENST00000494268 FIGNL2A6NMB9 653 aa11.29□□□□□ -0.6
MSL3-217ENST00000494268 SNRPBP14678 240 aaKnown RBP11.29□□□□□ -0.6
MSL3-217ENST00000494268 ATP1A2P50993 1020 aa11.29□□□□□ -0.6
MSL3-217ENST00000494268 GDF10P55107 478 aa11.29□□□□□ -0.6
MSL3-217ENST00000494268 CLN3Q13286 438 aa11.29□□□□□ -0.6
MSL3-217ENST00000494268 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
MSL3-217ENST00000494268 SOS2Q07890 1332 aaPredicted RBP11.29□□□□□ -0.6
MSL3-217ENST00000494268 SOBPA7XYQ1 873 aa11.28□□□□□ -0.6
MSL3-217ENST00000494268 DKK1O94907 266 aa11.28□□□□□ -0.6
MSL3-217ENST00000494268 INHAP05111 366 aa11.28□□□□□ -0.6
MSL3-217ENST00000494268 CCDC102BQ68D86 513 aa11.28□□□□□ -0.6
MSL3-217ENST00000494268 LARGE2Q8N3Y3 721 aa11.28□□□□□ -0.6
MSL3-217ENST00000494268 TPCN2Q8NHX9 752 aa11.28□□□□□ -0.6
MSL3-217ENST00000494268 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
MSL3-217ENST00000494268 NLRP3Q96P20 1036 aa11.28□□□□□ -0.6
MSL3-217ENST00000494268 ESYT1Q9BSJ8 1104 aa11.28□□□□□ -0.6
MSL3-217ENST00000494268 SERTAD1Q9UHV2 236 aa11.28□□□□□ -0.6
MSL3-217ENST00000494268 TTLL8A6PVC2 850 aa11.27□□□□□ -0.61
MSL3-217ENST00000494268 C11orf95C9JLR9 678 aaPredicted RBP11.27□□□□□ -0.61
MSL3-217ENST00000494268 PTK7Q13308 1070 aa11.27□□□□□ -0.61
MSL3-217ENST00000494268 LARP1Q6PKG0 1096 aaKnown RBP11.27□□□□□ -0.61
MSL3-217ENST00000494268 SENP2Q9HC62 589 aa11.27□□□□□ -0.61
MSL3-217ENST00000494268 HRH3Q9Y5N1 445 aa11.27□□□□□ -0.61
MSL3-217ENST00000494268 CENPCQ03188 943 aa11.26□□□□□ -0.61
MSL3-217ENST00000494268 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
MSL3-217ENST00000494268 FOXD4L5Q5VV16 416 aaPredicted RBP11.26□□□□□ -0.61
MSL3-217ENST00000494268 PBXIP1Q96AQ6 731 aa11.26□□□□□ -0.61
MSL3-217ENST00000494268 USP17L15C9J2P7 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 USP17L10C9JJH3 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 USP17L13C9JLJ4 530 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms