RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 PLSCR1O15162 318 aa11.87□□□□□ -0.51
LRCH3-219ENST00000494069 RREB1Q92766 1687 aa11.87□□□□□ -0.51
LRCH3-219ENST00000494069 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
LRCH3-219ENST00000494069 HSP90AB2PQ58FF8 381 aa11.86□□□□□ -0.51
LRCH3-219ENST00000494069 NBPF6Q5VWK0 638 aa11.86□□□□□ -0.51
LRCH3-219ENST00000494069 USHBP1Q8N6Y0 703 aa11.86□□□□□ -0.51
LRCH3-219ENST00000494069 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
LRCH3-219ENST00000494069 NBPF4Q96M43 638 aa11.86□□□□□ -0.51
LRCH3-219ENST00000494069 ANO8Q9HCE9 1232 aaPredicted RBP11.86□□□□□ -0.51
LRCH3-219ENST00000494069 NBPF14Q5TI25 921 aa11.85□□□□□ -0.51
LRCH3-219ENST00000494069 RGPD2P0DJD1 1756 aa11.84□□□□□ -0.51
LRCH3-219ENST00000494069 EMILIN1Q9Y6C2 1016 aa11.84□□□□□ -0.51
LRCH3-219ENST00000494069 KIF20BQ96Q89 1820 aa11.83□□□□□ -0.51
LRCH3-219ENST00000494069 RTL1A6NKG5 1358 aa11.83□□□□□ -0.52
LRCH3-219ENST00000494069 LRP5O75197 1615 aa11.83□□□□□ -0.52
LRCH3-219ENST00000494069 MEGF6O75095 1541 aa11.83□□□□□ -0.52
LRCH3-219ENST00000494069 TXNRD1Q16881 649 aa11.83□□□□□ -0.52
LRCH3-219ENST00000494069 PDGFDQ9GZP0 370 aaPredicted RBP11.83□□□□□ -0.52
LRCH3-219ENST00000494069 FAM208AQ9UK61 1670 aaKnown RBP11.83□□□□□ -0.52
LRCH3-219ENST00000494069 PPM1GO15355 546 aaPredicted RBP11.82□□□□□ -0.52
LRCH3-219ENST00000494069 ATXN8OSP0DMR3 200 aa11.82□□□□□ -0.52
LRCH3-219ENST00000494069 PANK3Q9H999 370 aa11.82□□□□□ -0.52
LRCH3-219ENST00000494069 INSRP06213 1382 aa11.81□□□□□ -0.52
LRCH3-219ENST00000494069 TNNT2P45379 298 aaPredicted RBP11.81□□□□□ -0.52
LRCH3-219ENST00000494069 ZCRB1Q8TBF4 217 aaKnown RBP11.81□□□□□ -0.52
LRCH3-219ENST00000494069 FLT4P35916 1363 aa11.8□□□□□ -0.52
LRCH3-219ENST00000494069 NHSQ6T4R5 1651 aa11.8□□□□□ -0.52
LRCH3-219ENST00000494069 CGNL1Q0VF96 1302 aa11.8□□□□□ -0.52
LRCH3-219ENST00000494069 RGPD3A6NKT7 1758 aaPredicted RBP11.79□□□□□ -0.52
LRCH3-219ENST00000494069 RGPD4Q7Z3J3 1758 aa11.79□□□□□ -0.52
LRCH3-219ENST00000494069 PRIM1P49642 420 aaKnown RBP11.79□□□□□ -0.52
LRCH3-219ENST00000494069 POLKQ9UBT6 870 aa11.79□□□□□ -0.52
LRCH3-219ENST00000494069 KAT6BQ8WYB5 2073 aa11.79□□□□□ -0.52
LRCH3-219ENST00000494069 KCNQ4P56696 695 aa11.78□□□□□ -0.52
LRCH3-219ENST00000494069 RAPGEF4Q8WZA2 1011 aa11.78□□□□□ -0.52
LRCH3-219ENST00000494069 SYTL4Q96C24 671 aaPredicted RBP11.78□□□□□ -0.52
LRCH3-219ENST00000494069 LRRC4BQ9NT99 713 aa11.78□□□□□ -0.52
LRCH3-219ENST00000494069 KIF24Q5T7B8 1368 aa11.78□□□□□ -0.52
LRCH3-219ENST00000494069 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.52
LRCH3-219ENST00000494069 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.52
LRCH3-219ENST00000494069 BTAF1O14981 1849 aa11.77□□□□□ -0.52
LRCH3-219ENST00000494069 TATP17735 454 aaPredicted RBP11.77□□□□□ -0.53
LRCH3-219ENST00000494069 SLC15A2Q16348 729 aa11.77□□□□□ -0.53
LRCH3-219ENST00000494069 STK32BQ9NY57 414 aa11.77□□□□□ -0.53
LRCH3-219ENST00000494069 WASHC2AQ641Q2 1341 aa11.77□□□□□ -0.53
LRCH3-219ENST00000494069 NSD2O96028 1365 aa11.77□□□□□ -0.53
LRCH3-219ENST00000494069 ZBTB7AO95365 584 aa11.76□□□□□ -0.53
LRCH3-219ENST00000494069 EYA1Q99502 592 aa11.76□□□□□ -0.53
LRCH3-219ENST00000494069 SPON1Q9HCB6 807 aa11.76□□□□□ -0.53
LRCH3-219ENST00000494069 MAP2P11137 1827 aaKnown RBP11.75□□□□□ -0.53
LRCH3-219ENST00000494069 CYP27B1O15528 508 aa11.75□□□□□ -0.53
LRCH3-219ENST00000494069 ZNF827Q17R98 1081 aa11.75□□□□□ -0.53
LRCH3-219ENST00000494069 EIF4A2Q14240 407 aaKnown RBP11.74□□□□□ -0.53
LRCH3-219ENST00000494069 KIF7Q2M1P5 1343 aa11.74□□□□□ -0.53
LRCH3-219ENST00000494069 DOT1LQ8TEK3 1739 aa11.74□□□□□ -0.53
LRCH3-219ENST00000494069 CASZ1Q86V15 1759 aa11.74□□□□□ -0.53
LRCH3-219ENST00000494069 NCAPD2Q15021 1401 aa11.73□□□□□ -0.53
LRCH3-219ENST00000494069 ANKRD26Q9UPS8 1709 aa11.73□□□□□ -0.53
LRCH3-219ENST00000494069 PAPPAQ13219 1627 aa11.72□□□□□ -0.53
LRCH3-219ENST00000494069 PTGER2P43116 358 aa11.72□□□□□ -0.53
LRCH3-219ENST00000494069 MORC1Q86VD1 984 aa11.72□□□□□ -0.53
LRCH3-219ENST00000494069 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
LRCH3-219ENST00000494069 PPP1R1BQ9UD71 204 aaPredicted RBP11.72□□□□□ -0.53
LRCH3-219ENST00000494069 PCDH11XQ9BZA7 1347 aa11.71□□□□□ -0.53
LRCH3-219ENST00000494069 PCDH11YQ9BZA8 1340 aa11.71□□□□□ -0.53
LRCH3-219ENST00000494069 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.53
LRCH3-219ENST00000494069 SLC27A3Q5K4L6 730 aa11.71□□□□□ -0.53
LRCH3-219ENST00000494069 MPRIPQ6WCQ1 1025 aa11.7□□□□□ -0.54
LRCH3-219ENST00000494069 CCNL1Q9UK58 526 aaPredicted RBP11.7□□□□□ -0.54
LRCH3-219ENST00000494069 KNSTRNQ9Y448 316 aa11.7□□□□□ -0.54
LRCH3-219ENST00000494069 PNPLA7Q6ZV29 1317 aa11.68□□□□□ -0.54
LRCH3-219ENST00000494069 IGSF1Q8N6C5 1336 aa11.68□□□□□ -0.54
LRCH3-219ENST00000494069 PER1O15534 1290 aaPredicted RBP11.68□□□□□ -0.54
LRCH3-219ENST00000494069 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
LRCH3-219ENST00000494069 AEBP1Q8IUX7 1158 aa11.68□□□□□ -0.54
LRCH3-219ENST00000494069 PIGBQ92521 554 aa11.68□□□□□ -0.54
LRCH3-219ENST00000494069 SGIP1Q9BQI5 828 aa11.68□□□□□ -0.54
LRCH3-219ENST00000494069 MTFR1LQ9H019 292 aa11.68□□□□□ -0.54
LRCH3-219ENST00000494069 SPG7Q9UQ90 795 aa11.68□□□□□ -0.54
LRCH3-219ENST00000494069 PKD1L3Q7Z443 1732 aa11.68□□□□□ -0.54
LRCH3-219ENST00000494069 TOGARAM1Q9Y4F4 1720 aa11.68□□□□□ -0.54
LRCH3-219ENST00000494069 PHKG2P15735 406 aa11.67□□□□□ -0.54
LRCH3-219ENST00000494069 CNGB1Q14028 1251 aaPredicted RBP11.67□□□□□ -0.54
LRCH3-219ENST00000494069 TFCP2L1Q9NZI6 479 aa11.67□□□□□ -0.54
LRCH3-219ENST00000494069 LY75O60449 1722 aa11.66□□□□□ -0.54
LRCH3-219ENST00000494069 CC2D1BQ5T0F9 858 aaKnown RBP11.66□□□□□ -0.54
LRCH3-219ENST00000494069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.546e-7■■□□□ 11.9
LRCH3-219ENST00000494069 PALLDQ8WX93 1383 aa11.66□□□□□ -0.54
LRCH3-219ENST00000494069 IL13P35225 146 aa11.65□□□□□ -0.54
LRCH3-219ENST00000494069 SMIM5Q71RC9 77 aa11.65□□□□□ -0.54
LRCH3-219ENST00000494069 IFNL2Q8IZJ0 200 aa11.65□□□□□ -0.54
LRCH3-219ENST00000494069 FHDC1Q9C0D6 1143 aaPredicted RBP11.65□□□□□ -0.54
LRCH3-219ENST00000494069 ITGB4P16144 1822 aa11.65□□□□□ -0.55
LRCH3-219ENST00000494069 MTHFSP49914 203 aa11.64□□□□□ -0.55
LRCH3-219ENST00000494069 SULT6B1Q6IMI4 303 aa11.64□□□□□ -0.55
LRCH3-219ENST00000494069 AMIGO3Q86WK7 504 aa11.64□□□□□ -0.55
LRCH3-219ENST00000494069 COL23A1Q86Y22 540 aaPredicted RBP11.64□□□□□ -0.55
LRCH3-219ENST00000494069 ASAP1Q9ULH1 1129 aa11.64□□□□□ -0.55
LRCH3-219ENST00000494069 TUBGCP6Q96RT7 1819 aa11.64□□□□□ -0.55
LRCH3-219ENST00000494069 ARXQ96QS3 562 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms