RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 RAPGEF4Q8WZA2 1011 aa30.92■■■□□ 2.54
SNIP1-203ENST00000493916 NUP188Q5SRE5 1749 aa30.92■■■□□ 2.54
SNIP1-203ENST00000493916 ZCRB1Q8TBF4 217 aaKnown RBP30.91■■■□□ 2.54
SNIP1-203ENST00000493916 TATP17735 454 aaPredicted RBP30.89■■■□□ 2.54
SNIP1-203ENST00000493916 DDX54Q8TDD1 881 aaKnown RBP30.89■■■□□ 2.54
SNIP1-203ENST00000493916 NPC1L1Q9UHC9 1359 aa30.88■■■□□ 2.53
SNIP1-203ENST00000493916 EIF4A2Q14240 407 aaKnown RBP30.87■■■□□ 2.53
SNIP1-203ENST00000493916 KCNQ2O43526 872 aa30.86■■■□□ 2.53
SNIP1-203ENST00000493916 EYA1Q99502 592 aa30.86■■■□□ 2.53
SNIP1-203ENST00000493916 PKD1L3Q7Z443 1732 aa30.85■■■□□ 2.53
SNIP1-203ENST00000493916 ACSBG1Q96GR2 724 aa30.85■■■□□ 2.53
SNIP1-203ENST00000493916 DOT1LQ8TEK3 1739 aa30.82■■■□□ 2.52
SNIP1-203ENST00000493916 PCDH11XQ9BZA7 1347 aa30.82■■■□□ 2.52
SNIP1-203ENST00000493916 PCDH11YQ9BZA8 1340 aa30.82■■■□□ 2.52
SNIP1-203ENST00000493916 PLEKHG2Q9H7P9 1386 aa30.81■■■□□ 2.52
SNIP1-203ENST00000493916 BTAF1O14981 1849 aa30.81■■■□□ 2.52
SNIP1-203ENST00000493916 IGSF1Q8N6C5 1336 aa30.8■■■□□ 2.52
SNIP1-203ENST00000493916 SRCAPQ6ZRS2 3230 aa30.8■■■□□ 2.52
SNIP1-203ENST00000493916 CC2D1BQ5T0F9 858 aaKnown RBP30.79■■■□□ 2.52
SNIP1-203ENST00000493916 PSDA5PKW4 1024 aaPredicted RBP30.78■■■□□ 2.52
SNIP1-203ENST00000493916 R3HDM1Q15032 1099 aaKnown RBP30.76■■■□□ 2.51
SNIP1-203ENST00000493916 NBPF14Q5TI25 921 aa30.76■■■□□ 2.51
SNIP1-203ENST00000493916 PROM2Q8N271 834 aa30.76■■■□□ 2.51
SNIP1-203ENST00000493916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.75■■■□□ 2.51
SNIP1-203ENST00000493916 SPG7Q9UQ90 795 aa30.74■■■□□ 2.51
SNIP1-203ENST00000493916 CYP27B1O15528 508 aa30.73■■■□□ 2.51
SNIP1-203ENST00000493916 TXNRD1Q16881 649 aa30.73■■■□□ 2.51
SNIP1-203ENST00000493916 PRIM1P49642 420 aaKnown RBP30.72■■■□□ 2.51
SNIP1-203ENST00000493916 MTHFSP49914 203 aa30.72■■■□□ 2.51
SNIP1-203ENST00000493916 LRP5O75197 1615 aa30.71■■■□□ 2.51
SNIP1-203ENST00000493916 IL13P35225 146 aa30.7■■■□□ 2.51
SNIP1-203ENST00000493916 SYTL4Q96C24 671 aaPredicted RBP30.69■■■□□ 2.5
SNIP1-203ENST00000493916 KDRP35968 1356 aa30.67■■■□□ 2.5
SNIP1-203ENST00000493916 TOGARAM1Q9Y4F4 1720 aa30.67■■■□□ 2.5
SNIP1-203ENST00000493916 NKX1-1Q15270 411 aaPredicted RBP30.67■■■□□ 2.5
SNIP1-203ENST00000493916 PAPPAQ13219 1627 aa30.66■■■□□ 2.5
SNIP1-203ENST00000493916 ANO8Q9HCE9 1232 aaPredicted RBP30.66■■■□□ 2.5
SNIP1-203ENST00000493916 KAT6BQ8WYB5 2073 aa30.65■■■□□ 2.5
SNIP1-203ENST00000493916 AEBP1Q8IUX7 1158 aa30.63■■■□□ 2.49
SNIP1-203ENST00000493916 LY75O60449 1722 aa30.63■■■□□ 2.49
SNIP1-203ENST00000493916 COL3A1P02461 1466 aaPredicted RBP30.63■■■□□ 2.49
SNIP1-203ENST00000493916 PHKG2P15735 406 aa30.62■■■□□ 2.49
SNIP1-203ENST00000493916 IFNL2Q8IZJ0 200 aa30.62■■■□□ 2.49
SNIP1-203ENST00000493916 CNGB1Q14028 1251 aaPredicted RBP30.61■■■□□ 2.49
SNIP1-203ENST00000493916 SLC27A3Q5K4L6 730 aa30.61■■■□□ 2.49
SNIP1-203ENST00000493916 SULT6B1Q6IMI4 303 aa30.61■■■□□ 2.49
SNIP1-203ENST00000493916 DIAPH1O60610 1272 aaKnown RBP30.59■■■□□ 2.49
SNIP1-203ENST00000493916 AMOTQ4VCS5 1084 aa30.59■■■□□ 2.49
SNIP1-203ENST00000493916 PLEKHO1Q53GL0 409 aaPredicted RBP30.59■■■□□ 2.49
SNIP1-203ENST00000493916 LRRC4BQ9NT99 713 aa30.58■■■□□ 2.49
SNIP1-203ENST00000493916 STK32BQ9NY57 414 aa30.58■■■□□ 2.49
SNIP1-203ENST00000493916 ITGB4P16144 1822 aa30.58■■■□□ 2.49
SNIP1-203ENST00000493916 CASZ1Q86V15 1759 aa30.57■■■□□ 2.48
SNIP1-203ENST00000493916 SLC15A2Q16348 729 aa30.56■■■□□ 2.48
SNIP1-203ENST00000493916 MPRIPQ6WCQ1 1025 aa30.55■■■□□ 2.48
SNIP1-203ENST00000493916 HSP90AB1P08238 724 aaKnown RBP30.53■■■□□ 2.48
SNIP1-203ENST00000493916 ZNF530Q6P9A1 599 aaPredicted RBP30.53■■■□□ 2.48
SNIP1-203ENST00000493916 PIGBQ92521 554 aa30.51■■■□□ 2.47
SNIP1-203ENST00000493916 PALLDQ8WX93 1383 aa30.51■■■□□ 2.47
SNIP1-203ENST00000493916 PPP2R1AP30153 589 aa30.5■■■□□ 2.47
SNIP1-203ENST00000493916 ZEB1P37275 1124 aaPredicted RBP30.5■■■□□ 2.47
SNIP1-203ENST00000493916 DCAF5Q96JK2 942 aa30.5■■■□□ 2.47
SNIP1-203ENST00000493916 TMOD3Q9NYL9 352 aa30.49■■■□□ 2.47
SNIP1-203ENST00000493916 CCNL1Q9UK58 526 aaPredicted RBP30.49■■■□□ 2.47
SNIP1-203ENST00000493916 KDM6AO15550 1401 aaPredicted RBP30.48■■■□□ 2.47
SNIP1-203ENST00000493916 HMOX1P09601 288 aa30.48■■■□□ 2.47
SNIP1-203ENST00000493916 ZNF827Q17R98 1081 aa30.48■■■□□ 2.47
SNIP1-203ENST00000493916 SMARCC1Q92922 1105 aaPredicted RBP30.48■■■□□ 2.47
SNIP1-203ENST00000493916 AKT1S1Q96B36 256 aa30.48■■■□□ 2.47
SNIP1-203ENST00000493916 CFAP53Q96M91 514 aa30.48■■■□□ 2.47
SNIP1-203ENST00000493916 QSER1Q2KHR3 1735 aa30.47■■■□□ 2.47
SNIP1-203ENST00000493916 ERVV-2B6SEH9 535 aa30.46■■■□□ 2.47
SNIP1-203ENST00000493916 C1orf141Q5JVX7 400 aa30.46■■■□□ 2.47
SNIP1-203ENST00000493916 KCNQ4P56696 695 aa30.45■■■□□ 2.47
SNIP1-203ENST00000493916 C5P01031 1676 aa30.44■■■□□ 2.46
SNIP1-203ENST00000493916 PDGFDQ9GZP0 370 aaPredicted RBP30.44■■■□□ 2.46
SNIP1-203ENST00000493916 SPON1Q9HCB6 807 aa30.43■■■□□ 2.46
SNIP1-203ENST00000493916 U2SURPO15042 1029 aaKnown RBP30.42■■■□□ 2.46
SNIP1-203ENST00000493916 HMGB2P26583 209 aaKnown RBP30.42■■■□□ 2.46
SNIP1-203ENST00000493916 AKAP4Q5JQC9 854 aa30.41■■■□□ 2.46
SNIP1-203ENST00000493916 TAF1LQ8IZX4 1826 aa30.39■■■□□ 2.46
SNIP1-203ENST00000493916 TUBGCP6Q96RT7 1819 aa30.39■■■□□ 2.46
SNIP1-203ENST00000493916 SCN11AQ9UI33 1791 aa30.38■■■□□ 2.45
SNIP1-203ENST00000493916 ASAP1Q9ULH1 1129 aa30.38■■■□□ 2.45
SNIP1-203ENST00000493916 ATG3Q9NT62 314 aa30.37■■■□□ 2.45
SNIP1-203ENST00000493916 NUDCQ9Y266 331 aa30.37■■■□□ 2.45
SNIP1-203ENST00000493916 ZBTB7AO95365 584 aa30.36■■■□□ 2.45
SNIP1-203ENST00000493916 DDX10Q13206 875 aaKnown RBP30.36■■■□□ 2.45
SNIP1-203ENST00000493916 MTHFSDQ2M296 383 aaKnown RBP30.36■■■□□ 2.45
SNIP1-203ENST00000493916 TFCP2L1Q9NZI6 479 aa30.36■■■□□ 2.45
SNIP1-203ENST00000493916 ADAMTS7Q9UKP4 1686 aa30.36■■■□□ 2.45
SNIP1-203ENST00000493916 LOC102724428A0A0B4J2F2 783 aa30.35■■■□□ 2.45
SNIP1-203ENST00000493916 SIK1P57059 783 aa30.35■■■□□ 2.45
SNIP1-203ENST00000493916 CABP4P57796 275 aa30.35■■■□□ 2.45
SNIP1-203ENST00000493916 PNPLA7Q6ZV29 1317 aa30.35■■■□□ 2.45
SNIP1-203ENST00000493916 C4BP0C0L5 1744 aa30.34■■■□□ 2.45
SNIP1-203ENST00000493916 ZNF831Q5JPB2 1677 aa30.34■■■□□ 2.45
SNIP1-203ENST00000493916 MRC1P22897 1456 aa30.34■■■□□ 2.45
SNIP1-203ENST00000493916 MTFR1LQ9H019 292 aa30.34■■■□□ 2.45
SNIP1-203ENST00000493916 RSPH6AQ9H0K4 717 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms