RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 ZCRB1Q8TBF4 217 aaKnown RBP32.8■■■□□ 2.84
RHBDD3-206ENST00000493894 KAT6BQ8WYB5 2073 aa32.8■■■□□ 2.84
RHBDD3-206ENST00000493894 PAPPAQ13219 1627 aa32.8■■■□□ 2.84
RHBDD3-206ENST00000493894 POLR3GLQ9BT43 218 aa32.79■■■□□ 2.84
RHBDD3-206ENST00000493894 CGNL1Q0VF96 1302 aa32.78■■■□□ 2.84
RHBDD3-206ENST00000493894 USHBP1Q8N6Y0 703 aa32.78■■■□□ 2.84
RHBDD3-206ENST00000493894 RAPGEF4Q8WZA2 1011 aa32.78■■■□□ 2.84
RHBDD3-206ENST00000493894 ANKRD26Q9UPS8 1709 aa32.77■■■□□ 2.84
RHBDD3-206ENST00000493894 PDGFDQ9GZP0 370 aaPredicted RBP32.75■■■□□ 2.83
RHBDD3-206ENST00000493894 EMILIN1Q9Y6C2 1016 aa32.75■■■□□ 2.83
RHBDD3-206ENST00000493894 HSPA5P11021 654 aaKnown RBP32.74■■■□□ 2.83
RHBDD3-206ENST00000493894 SYTL4Q96C24 671 aaPredicted RBP32.74■■■□□ 2.83
RHBDD3-206ENST00000493894 TATP17735 454 aaPredicted RBP32.73■■■□□ 2.83
RHBDD3-206ENST00000493894 ZBTB7AO95365 584 aa32.72■■■□□ 2.83
RHBDD3-206ENST00000493894 PPM1GO15355 546 aaPredicted RBP32.69■■■□□ 2.82
RHBDD3-206ENST00000493894 PRIM1P49642 420 aaKnown RBP32.69■■■□□ 2.82
RHBDD3-206ENST00000493894 NSD2O96028 1365 aa32.69■■■□□ 2.82
RHBDD3-206ENST00000493894 SLC27A3Q5K4L6 730 aa32.68■■■□□ 2.82
RHBDD3-206ENST00000493894 LRRC4BQ9NT99 713 aa32.68■■■□□ 2.82
RHBDD3-206ENST00000493894 PCDH11XQ9BZA7 1347 aa32.68■■■□□ 2.82
RHBDD3-206ENST00000493894 PCDH11YQ9BZA8 1340 aa32.68■■■□□ 2.82
RHBDD3-206ENST00000493894 MAP2P11137 1827 aaKnown RBP32.65■■■□□ 2.82
RHBDD3-206ENST00000493894 LY75O60449 1722 aa32.64■■■□□ 2.82
RHBDD3-206ENST00000493894 NCAPD2Q15021 1401 aa32.64■■■□□ 2.82
RHBDD3-206ENST00000493894 ZNF827Q17R98 1081 aa32.64■■■□□ 2.82
RHBDD3-206ENST00000493894 WASHC2AQ641Q2 1341 aa32.64■■■□□ 2.82
RHBDD3-206ENST00000493894 MTFR1LQ9H019 292 aa32.64■■■□□ 2.82
RHBDD3-206ENST00000493894 ATF5Q9Y2D1 282 aaPredicted RBP32.63■■■□□ 2.81
RHBDD3-206ENST00000493894 PKD1L3Q7Z443 1732 aa32.63■■■□□ 2.81
RHBDD3-206ENST00000493894 PTGER2P43116 358 aa32.62■■■□□ 2.81
RHBDD3-206ENST00000493894 QSER1Q2KHR3 1735 aa32.6■■■□□ 2.81
RHBDD3-206ENST00000493894 AKT1S1Q96B36 256 aa32.59■■■□□ 2.81
RHBDD3-206ENST00000493894 POLKQ9UBT6 870 aa32.59■■■□□ 2.81
RHBDD3-206ENST00000493894 PANK3Q9H999 370 aa32.58■■■□□ 2.81
RHBDD3-206ENST00000493894 TNNT2P45379 298 aaPredicted RBP32.57■■■□□ 2.8
RHBDD3-206ENST00000493894 DCAF8L1A6NGE4 600 aa32.55■■■□□ 2.8
RHBDD3-206ENST00000493894 CCNL1Q9UK58 526 aaPredicted RBP32.55■■■□□ 2.8
RHBDD3-206ENST00000493894 CYP27B1O15528 508 aa32.54■■■□□ 2.8
RHBDD3-206ENST00000493894 KCNQ4P56696 695 aa32.54■■■□□ 2.8
RHBDD3-206ENST00000493894 TOGARAM1Q9Y4F4 1720 aa32.54■■■□□ 2.8
RHBDD3-206ENST00000493894 EYA1Q99502 592 aa32.53■■■□□ 2.8
RHBDD3-206ENST00000493894 SGIP1Q9BQI5 828 aa32.53■■■□□ 2.8
RHBDD3-206ENST00000493894 TUBGCP6Q96RT7 1819 aa32.52■■■□□ 2.8
RHBDD3-206ENST00000493894 SPG7Q9UQ90 795 aa32.52■■■□□ 2.8
RHBDD3-206ENST00000493894 TFCP2L1Q9NZI6 479 aa32.51■■■□□ 2.79
RHBDD3-206ENST00000493894 PNPLA7Q6ZV29 1317 aa32.51■■■□□ 2.79
RHBDD3-206ENST00000493894 EIF4A2Q14240 407 aaKnown RBP32.48■■■□□ 2.79
RHBDD3-206ENST00000493894 MPRIPQ6WCQ1 1025 aa32.48■■■□□ 2.79
RHBDD3-206ENST00000493894 SLC16A10Q8TF71 515 aa32.48■■■□□ 2.79
RHBDD3-206ENST00000493894 PALLDQ8WX93 1383 aa32.47■■■□□ 2.79
RHBDD3-206ENST00000493894 ITGB4P16144 1822 aa32.47■■■□□ 2.79
RHBDD3-206ENST00000493894 FHDC1Q9C0D6 1143 aaPredicted RBP32.47■■■□□ 2.79
RHBDD3-206ENST00000493894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.47■■■□□ 2.79
RHBDD3-206ENST00000493894 C5P01031 1676 aa32.46■■■□□ 2.79
RHBDD3-206ENST00000493894 ARXQ96QS3 562 aa32.46■■■□□ 2.79
RHBDD3-206ENST00000493894 PLEKHG2Q9H7P9 1386 aa32.45■■■□□ 2.79
RHBDD3-206ENST00000493894 NKX1-1Q15270 411 aaPredicted RBP32.44■■■□□ 2.78
RHBDD3-206ENST00000493894 MORC1Q86VD1 984 aa32.43■■■□□ 2.78
RHBDD3-206ENST00000493894 SYT17Q9BSW7 474 aa32.43■■■□□ 2.78
RHBDD3-206ENST00000493894 KNSTRNQ9Y448 316 aa32.43■■■□□ 2.78
RHBDD3-206ENST00000493894 HMGB2P26583 209 aaKnown RBP32.42■■■□□ 2.78
RHBDD3-206ENST00000493894 IGSF1Q8N6C5 1336 aa32.42■■■□□ 2.78
RHBDD3-206ENST00000493894 COL24A1Q17RW2 1714 aa32.41■■■□□ 2.78
RHBDD3-206ENST00000493894 SMARCC1Q92922 1105 aaPredicted RBP32.41■■■□□ 2.78
RHBDD3-206ENST00000493894 POLD1P28340 1107 aa32.4■■■□□ 2.78
RHBDD3-206ENST00000493894 MAP3K5Q99683 1374 aa32.4■■■□□ 2.78
RHBDD3-206ENST00000493894 IFNL2Q8IZJ0 200 aa32.39■■■□□ 2.78
RHBDD3-206ENST00000493894 KIF7Q2M1P5 1343 aa32.39■■■□□ 2.78
RHBDD3-206ENST00000493894 TAF1LQ8IZX4 1826 aa32.39■■■□□ 2.78
RHBDD3-206ENST00000493894 PHKG2P15735 406 aa32.38■■■□□ 2.77
RHBDD3-206ENST00000493894 YY1P25490 414 aa32.38■■■□□ 2.77
RHBDD3-206ENST00000493894 PIGBQ92521 554 aa32.37■■■□□ 2.77
RHBDD3-206ENST00000493894 MSH5O43196 834 aa32.35■■■□□ 2.77
RHBDD3-206ENST00000493894 TMOD3Q9NYL9 352 aa32.35■■■□□ 2.77
RHBDD3-206ENST00000493894 C4BP0C0L5 1744 aa32.34■■■□□ 2.77
RHBDD3-206ENST00000493894 COL23A1Q86Y22 540 aaPredicted RBP32.32■■■□□ 2.76
RHBDD3-206ENST00000493894 AMER1Q5JTC6 1135 aaPredicted RBP32.3■■■□□ 2.76
RHBDD3-206ENST00000493894 KLHL34Q8N239 644 aa32.3■■■□□ 2.76
RHBDD3-206ENST00000493894 FLAD1Q8NFF5 587 aa32.29■■■□□ 2.76
RHBDD3-206ENST00000493894 PLEKHO1Q53GL0 409 aaPredicted RBP32.28■■■□□ 2.76
RHBDD3-206ENST00000493894 AK7Q96M32 723 aa32.28■■■□□ 2.76
RHBDD3-206ENST00000493894 LOC102724428A0A0B4J2F2 783 aa32.26■■■□□ 2.75
RHBDD3-206ENST00000493894 SIK1P57059 783 aa32.26■■■□□ 2.75
RHBDD3-206ENST00000493894 HSP90AB1P08238 724 aaKnown RBP32.25■■■□□ 2.75
RHBDD3-206ENST00000493894 AMOTQ4VCS5 1084 aa32.25■■■□□ 2.75
RHBDD3-206ENST00000493894 ZNF530Q6P9A1 599 aaPredicted RBP32.24■■■□□ 2.75
RHBDD3-206ENST00000493894 ASAP1Q9ULH1 1129 aa32.24■■■□□ 2.75
RHBDD3-206ENST00000493894 AEBP1Q8IUX7 1158 aa32.23■■■□□ 2.75
RHBDD3-206ENST00000493894 DCAF5Q96JK2 942 aa32.23■■■□□ 2.75
RHBDD3-206ENST00000493894 UBR3Q6ZT12 1888 aa32.23■■■□□ 2.75
RHBDD3-206ENST00000493894 MSL1Q68DK7 614 aa32.22■■■□□ 2.75
RHBDD3-206ENST00000493894 KDRP35968 1356 aa32.21■■■□□ 2.75
RHBDD3-206ENST00000493894 KDM6AO15550 1401 aaPredicted RBP32.2■■■□□ 2.75
RHBDD3-206ENST00000493894 ERVV-2B6SEH9 535 aa32.2■■■□□ 2.75
RHBDD3-206ENST00000493894 SULT6B1Q6IMI4 303 aa32.2■■■□□ 2.75
RHBDD3-206ENST00000493894 ATG3Q9NT62 314 aa32.2■■■□□ 2.75
RHBDD3-206ENST00000493894 IL13P35225 146 aa32.19■■■□□ 2.74
RHBDD3-206ENST00000493894 LINC00116Q8NCU8 138 aa32.19■■■□□ 2.74
RHBDD3-206ENST00000493894 ATP6V1AP38606 617 aa32.18■■■□□ 2.74
RHBDD3-206ENST00000493894 C1orf141Q5JVX7 400 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms