RNA–Protein interactions for RNA: ENST00000493752.5

ABCD4-216, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 719 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-216ENST00000493752 PLEKHG2Q9H7P9 1386 aa10.83□□□□□ -0.68
ABCD4-216ENST00000493752 WDR43Q15061 677 aaKnown RBP eCLIP10.83□□□□□ -0.68
ABCD4-216ENST00000493752 AMOTQ4VCS5 1084 aa10.83□□□□□ -0.68
ABCD4-216ENST00000493752 PLEKHO1Q53GL0 409 aaPredicted RBP10.83□□□□□ -0.68
ABCD4-216ENST00000493752 KRT27Q7Z3Y8 459 aa10.83□□□□□ -0.68
ABCD4-216ENST00000493752 MIER1Q8N108 512 aa10.83□□□□□ -0.68
ABCD4-216ENST00000493752 RSPH6AQ9H0K4 717 aa10.83□□□□□ -0.68
ABCD4-216ENST00000493752 SPG7Q9UQ90 795 aa10.83□□□□□ -0.68
ABCD4-216ENST00000493752 ADAMTS8Q9UP79 889 aa10.82□□□□□ -0.68
ABCD4-216ENST00000493752 RGPD5Q99666 1765 aa10.82□□□□□ -0.68
ABCD4-216ENST00000493752 PRKAR2BP31323 418 aa10.81□□□□□ -0.68
ABCD4-216ENST00000493752 OVOS2A0A0G2JMS6 1433 aa10.81□□□□□ -0.68
ABCD4-216ENST00000493752 MEGF6O75095 1541 aa10.8□□□□□ -0.68
ABCD4-216ENST00000493752 NEFMP07197 916 aa10.8□□□□□ -0.68
ABCD4-216ENST00000493752 MARCH10Q8NA82 808 aaPredicted RBP10.8□□□□□ -0.68
ABCD4-216ENST00000493752 DDX54Q8TDD1 881 aaKnown RBP10.8□□□□□ -0.68
ABCD4-216ENST00000493752 PHACTR3Q96KR7 559 aa10.8□□□□□ -0.68
ABCD4-216ENST00000493752 PLEKHF1Q96S99 279 aa10.8□□□□□ -0.68
ABCD4-216ENST00000493752 RGS12O14924 1447 aa10.8□□□□□ -0.68
ABCD4-216ENST00000493752 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
ABCD4-216ENST00000493752 CYP27B1O15528 508 aa10.79□□□□□ -0.68
ABCD4-216ENST00000493752 NKX1-1Q15270 411 aaPredicted RBP10.79□□□□□ -0.68
ABCD4-216ENST00000493752 MTHFSDQ2M296 383 aaKnown RBP10.79□□□□□ -0.68
ABCD4-216ENST00000493752 FAM196AQ6ZSG2 479 aa10.79□□□□□ -0.68
ABCD4-216ENST00000493752 IFNL2Q8IZJ0 200 aa10.79□□□□□ -0.68
ABCD4-216ENST00000493752 PCDH11XQ9BZA7 1347 aa10.79□□□□□ -0.68
ABCD4-216ENST00000493752 PCDH11YQ9BZA8 1340 aa10.79□□□□□ -0.68
ABCD4-216ENST00000493752 GAS2L2Q8NHY3 880 aa10.78□□□□□ -0.68
ABCD4-216ENST00000493752 RUNDC1Q96C34 613 aa10.78□□□□□ -0.68
ABCD4-216ENST00000493752 THSD7AQ9UPZ6 1657 aa10.77□□□□□ -0.69
ABCD4-216ENST00000493752 HSP90AB1P08238 724 aaKnown RBP10.77□□□□□ -0.69
ABCD4-216ENST00000493752 PHKG2P15735 406 aa10.77□□□□□ -0.69
ABCD4-216ENST00000493752 AKAP4Q5JQC9 854 aa10.77□□□□□ -0.69
ABCD4-216ENST00000493752 C1orf141Q5JVX7 400 aa10.77□□□□□ -0.69
ABCD4-216ENST00000493752 ZNF530Q6P9A1 599 aaPredicted RBP10.77□□□□□ -0.69
ABCD4-216ENST00000493752 RGPD1P0DJD0 1748 aa10.77□□□□□ -0.69
ABCD4-216ENST00000493752 TNS2Q63HR2 1409 aa10.76□□□□□ -0.69
ABCD4-216ENST00000493752 FAM182BQ5T319 152 aa10.76□□□□□ -0.69
ABCD4-216ENST00000493752 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
ABCD4-216ENST00000493752 DCAF5Q96JK2 942 aa10.76□□□□□ -0.69
ABCD4-216ENST00000493752 MAPK8IP3Q9UPT6 1336 aa10.76□□□□□ -0.69
ABCD4-216ENST00000493752 BCL9O00512 1426 aa10.75□□□□□ -0.69
ABCD4-216ENST00000493752 GNAT3A8MTJ3 354 aa10.75□□□□□ -0.69
ABCD4-216ENST00000493752 HTATSF1O43719 755 aaKnown RBP10.75□□□□□ -0.69
ABCD4-216ENST00000493752 CCDC146Q8IYE0 955 aa10.75□□□□□ -0.69
ABCD4-216ENST00000493752 RGPD2P0DJD1 1756 aa10.75□□□□□ -0.69
ABCD4-216ENST00000493752 SRCAPQ6ZRS2 3230 aa10.75□□□□□ -0.69
ABCD4-216ENST00000493752 NFE2L2Q16236 605 aa10.74□□□□□ -0.69
ABCD4-216ENST00000493752 PARP4Q9UKK3 1724 aaKnown RBP10.73□□□□□ -0.69
ABCD4-216ENST00000493752 ERVV-2B6SEH9 535 aa10.73□□□□□ -0.69
ABCD4-216ENST00000493752 TMPOP42166 694 aaKnown RBP10.73□□□□□ -0.69
ABCD4-216ENST00000493752 RIPK4P57078 832 aa10.73□□□□□ -0.69
ABCD4-216ENST00000493752 MPRIPQ6WCQ1 1025 aa10.73□□□□□ -0.69
ABCD4-216ENST00000493752 CCDC125Q86Z20 511 aa10.73□□□□□ -0.69
ABCD4-216ENST00000493752 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
ABCD4-216ENST00000493752 APAF1O14727 1248 aa10.72□□□□□ -0.69
ABCD4-216ENST00000493752 RNMTO43148 476 aaKnown RBP10.72□□□□□ -0.69
ABCD4-216ENST00000493752 PRIM1P49642 420 aaKnown RBP10.72□□□□□ -0.69
ABCD4-216ENST00000493752 NCBP3Q53F19 620 aaKnown RBP10.72□□□□□ -0.69
ABCD4-216ENST00000493752 IL17REQ8NFR9 667 aa10.72□□□□□ -0.69
ABCD4-216ENST00000493752 RTF1Q92541 710 aaKnown RBP10.72□□□□□ -0.69
ABCD4-216ENST00000493752 LGR6Q9HBX8 967 aa10.72□□□□□ -0.69
ABCD4-216ENST00000493752 KCNQ2O43526 872 aa10.71□□□□□ -0.69
ABCD4-216ENST00000493752 LRRC37A3O60309 1634 aa10.71□□□□□ -0.69
ABCD4-216ENST00000493752 TRIM37O94972 964 aa10.71□□□□□ -0.69
ABCD4-216ENST00000493752 CABP4P57796 275 aa10.71□□□□□ -0.69
ABCD4-216ENST00000493752 LMOD3Q0VAK6 560 aa10.71□□□□□ -0.69
ABCD4-216ENST00000493752 ACSBG1Q96GR2 724 aa10.71□□□□□ -0.69
ABCD4-216ENST00000493752 MAP3K5Q99683 1374 aa10.71□□□□□ -0.69
ABCD4-216ENST00000493752 NEUROD2Q15784 382 aa10.7□□□□□ -0.7
ABCD4-216ENST00000493752 NGEFQ8N5V2 710 aa10.7□□□□□ -0.7
ABCD4-216ENST00000493752 NFATC2IPQ8NCF5 419 aa10.7□□□□□ -0.7
ABCD4-216ENST00000493752 SYTL4Q96C24 671 aaPredicted RBP10.7□□□□□ -0.7
ABCD4-216ENST00000493752 RRP7AQ9Y3A4 280 aaKnown RBP10.7□□□□□ -0.7
ABCD4-216ENST00000493752 MSH5O43196 834 aa10.69□□□□□ -0.7
ABCD4-216ENST00000493752 PTF1AQ7RTS3 328 aa10.69□□□□□ -0.7
ABCD4-216ENST00000493752 PIGBQ92521 554 aa10.69□□□□□ -0.7
ABCD4-216ENST00000493752 UPF1Q92900 1129 aaKnown RBP eCLIP10.69□□□□□ -0.7
ABCD4-216ENST00000493752 SLC52A2Q9HAB3 445 aa10.69□□□□□ -0.7
ABCD4-216ENST00000493752 TMOD3Q9NYL9 352 aa10.69□□□□□ -0.7
ABCD4-216ENST00000493752 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
ABCD4-216ENST00000493752 KDM6AO15550 1401 aaPredicted RBP10.68□□□□□ -0.7
ABCD4-216ENST00000493752 CEMIPQ8WUJ3 1361 aa10.68□□□□□ -0.7
ABCD4-216ENST00000493752 PKD1L3Q7Z443 1732 aa10.68□□□□□ -0.7
ABCD4-216ENST00000493752 APBA3O96018 575 aa10.68□□□□□ -0.7
ABCD4-216ENST00000493752 TEFQ10587 303 aa10.68□□□□□ -0.7
ABCD4-216ENST00000493752 SF3B2Q13435 895 aaKnown RBP10.68□□□□□ -0.7
ABCD4-216ENST00000493752 DCTN1Q14203 1278 aa10.68□□□□□ -0.7
ABCD4-216ENST00000493752 CCDC27Q2M243 656 aa10.68□□□□□ -0.7
ABCD4-216ENST00000493752 MCM10Q7L590 875 aa10.68□□□□□ -0.7
ABCD4-216ENST00000493752 WNK3Q9BYP7 1800 aa10.68□□□□□ -0.7
ABCD4-216ENST00000493752 TAF7Q15545 349 aaPredicted RBP10.67□□□□□ -0.7
ABCD4-216ENST00000493752 BRWD3Q6RI45 1802 aa10.66□□□□□ -0.7
ABCD4-216ENST00000493752 PLSCR1O15162 318 aa10.66□□□□□ -0.7
ABCD4-216ENST00000493752 CALD1Q05682 793 aaKnown RBP10.66□□□□□ -0.7
ABCD4-216ENST00000493752 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
ABCD4-216ENST00000493752 WWC1Q8IX03 1113 aa10.65□□□□□ -0.7
ABCD4-216ENST00000493752 THUMPD2Q9BTF0 503 aaKnown RBP10.65□□□□□ -0.7
ABCD4-216ENST00000493752 ATG3Q9NT62 314 aa10.65□□□□□ -0.7
ABCD4-216ENST00000493752 BABAM1Q9NWV8 329 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms