RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 DCCP43146 1447 aa13.71□□□□□ -0.22
PHACTR4-204ENST00000493669 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.22
PHACTR4-204ENST00000493669 C8orf34Q49A92 452 aa13.71□□□□□ -0.22
PHACTR4-204ENST00000493669 PROSER2Q86WR7 435 aaPredicted RBP13.7□□□□□ -0.22
PHACTR4-204ENST00000493669 NUTM2GQ5VZR2 741 aa13.7□□□□□ -0.22
PHACTR4-204ENST00000493669 TRPM3Q9HCF6 1732 aaPredicted RBP13.7□□□□□ -0.22
PHACTR4-204ENST00000493669 MCM10Q7L590 875 aa13.7□□□□□ -0.22
PHACTR4-204ENST00000493669 C1orf167Q5SNV9 1468 aa13.69□□□□□ -0.22
PHACTR4-204ENST00000493669 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
PHACTR4-204ENST00000493669 NOP58Q9Y2X3 529 aaKnown RBP13.69□□□□□ -0.22
PHACTR4-204ENST00000493669 MYT1Q01538 1121 aa13.69□□□□□ -0.22
PHACTR4-204ENST00000493669 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
PHACTR4-204ENST00000493669 BABAM1Q9NWV8 329 aa13.69□□□□□ -0.22
PHACTR4-204ENST00000493669 PDZRN3Q9UPQ7 1066 aa13.68□□□□□ -0.22
PHACTR4-204ENST00000493669 SOS1Q07889 1333 aaPredicted RBP13.68□□□□□ -0.22
PHACTR4-204ENST00000493669 USP19O94966 1318 aa13.67□□□□□ -0.22
PHACTR4-204ENST00000493669 MAP3K5Q99683 1374 aa13.67□□□□□ -0.22
PHACTR4-204ENST00000493669 GNAT3A8MTJ3 354 aa13.67□□□□□ -0.22
PHACTR4-204ENST00000493669 ELL2O00472 640 aaPredicted RBP13.67□□□□□ -0.22
PHACTR4-204ENST00000493669 SMC5Q8IY18 1101 aa13.67□□□□□ -0.22
PHACTR4-204ENST00000493669 DDRGK1Q96HY6 314 aa13.67□□□□□ -0.22
PHACTR4-204ENST00000493669 ZBTB7BO15156 539 aaPredicted RBP13.66□□□□□ -0.22
PHACTR4-204ENST00000493669 ORAI2Q96SN7 254 aa13.66□□□□□ -0.22
PHACTR4-204ENST00000493669 PTPRCP08575 1304 aa13.66□□□□□ -0.22
PHACTR4-204ENST00000493669 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
PHACTR4-204ENST00000493669 NCAPD2Q15021 1401 aa13.65□□□□□ -0.22
PHACTR4-204ENST00000493669 FOXO3O43524 673 aa13.65□□□□□ -0.22
PHACTR4-204ENST00000493669 TSPYL4Q9UJ04 414 aa13.65□□□□□ -0.23
PHACTR4-204ENST00000493669 MSH6P52701 1360 aa13.65□□□□□ -0.23
PHACTR4-204ENST00000493669 NPM2Q86SE8 214 aaKnown RBP13.64□□□□□ -0.23
PHACTR4-204ENST00000493669 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
PHACTR4-204ENST00000493669 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
PHACTR4-204ENST00000493669 ARHGEF25Q86VW2 580 aa13.63□□□□□ -0.23
PHACTR4-204ENST00000493669 CAMTA1Q9Y6Y1 1673 aa13.63□□□□□ -0.23
PHACTR4-204ENST00000493669 GCP02774 474 aa13.63□□□□□ -0.23
PHACTR4-204ENST00000493669 KRT28Q7Z3Y7 464 aa13.63□□□□□ -0.23
PHACTR4-204ENST00000493669 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
PHACTR4-204ENST00000493669 LTV1Q96GA3 475 aaPredicted RBP13.62□□□□□ -0.23
PHACTR4-204ENST00000493669 RGS12O14924 1447 aa13.62□□□□□ -0.23
PHACTR4-204ENST00000493669 ATF3P18847 181 aa13.62□□□□□ -0.23
PHACTR4-204ENST00000493669 STRCP1A6NGW2 1772 aa13.62□□□□□ -0.23
PHACTR4-204ENST00000493669 GCC1Q96CN9 775 aa13.62□□□□□ -0.23
PHACTR4-204ENST00000493669 MED1Q15648 1581 aaPredicted RBP13.61□□□□□ -0.23
PHACTR4-204ENST00000493669 LMTK3Q96Q04 1460 aa13.61□□□□□ -0.23
PHACTR4-204ENST00000493669 CEMIPQ8WUJ3 1361 aa13.61□□□□□ -0.23
PHACTR4-204ENST00000493669 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
PHACTR4-204ENST00000493669 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
PHACTR4-204ENST00000493669 LMO7Q8WWI1 1683 aa13.6□□□□□ -0.23
PHACTR4-204ENST00000493669 KRT24Q2M2I5 525 aa13.6□□□□□ -0.23
PHACTR4-204ENST00000493669 OVOS2A0A0G2JMS6 1433 aa13.6□□□□□ -0.23
PHACTR4-204ENST00000493669 NUCB1Q02818 461 aa13.6□□□□□ -0.23
PHACTR4-204ENST00000493669 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
PHACTR4-204ENST00000493669 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
PHACTR4-204ENST00000493669 ABCC6O95255 1503 aa13.59□□□□□ -0.23
PHACTR4-204ENST00000493669 AMOTQ4VCS5 1084 aa13.59□□□□□ -0.23
PHACTR4-204ENST00000493669 IL17REQ8NFR9 667 aa13.59□□□□□ -0.23
PHACTR4-204ENST00000493669 CACNA1FO60840 1977 aa13.59□□□□□ -0.23
PHACTR4-204ENST00000493669 FAM208AQ9UK61 1670 aaKnown RBP13.58□□□□□ -0.23
PHACTR4-204ENST00000493669 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.23
PHACTR4-204ENST00000493669 PLEKHO1Q53GL0 409 aaPredicted RBP13.58□□□□□ -0.24
PHACTR4-204ENST00000493669 PLEKHG2Q9H7P9 1386 aa13.58□□□□□ -0.24
PHACTR4-204ENST00000493669 CCDC30Q5VVM6 783 aa13.58□□□□□ -0.24
PHACTR4-204ENST00000493669 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.24
PHACTR4-204ENST00000493669 STK31Q9BXU1 1019 aa13.58□□□□□ -0.24
PHACTR4-204ENST00000493669 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
PHACTR4-204ENST00000493669 XPCQ01831 940 aaPredicted RBP13.57□□□□□ -0.24
PHACTR4-204ENST00000493669 MIS18AQ9NYP9 233 aa13.57□□□□□ -0.24
PHACTR4-204ENST00000493669 NPHP3Q7Z494 1330 aa13.57□□□□□ -0.24
PHACTR4-204ENST00000493669 RGPD2P0DJD1 1756 aa13.57□□□□□ -0.24
PHACTR4-204ENST00000493669 AKAP4Q5JQC9 854 aa13.57□□□□□ -0.24
PHACTR4-204ENST00000493669 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
PHACTR4-204ENST00000493669 HOXB7P09629 217 aa13.56□□□□□ -0.24
PHACTR4-204ENST00000493669 ANKRD24Q8TF21 1146 aa13.56□□□□□ -0.24
PHACTR4-204ENST00000493669 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
PHACTR4-204ENST00000493669 CCT4P50991 539 aaKnown RBP13.55□□□□□ -0.24
PHACTR4-204ENST00000493669 UPF2Q9HAU5 1272 aaKnown RBP13.55□□□□□ -0.24
PHACTR4-204ENST00000493669 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
PHACTR4-204ENST00000493669 RPAP2Q8IXW5 612 aaPredicted RBP13.55□□□□□ -0.24
PHACTR4-204ENST00000493669 TNS3Q68CZ2 1445 aa13.55□□□□□ -0.24
PHACTR4-204ENST00000493669 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
PHACTR4-204ENST00000493669 N4BP2Q86UW6 1770 aaPredicted RBP13.54□□□□□ -0.24
PHACTR4-204ENST00000493669 ZBTB7CA1YPR0 619 aa13.54□□□□□ -0.24
PHACTR4-204ENST00000493669 SIRT2Q8IXJ6 389 aa13.54□□□□□ -0.24
PHACTR4-204ENST00000493669 ATP10DQ9P241 1426 aa13.54□□□□□ -0.24
PHACTR4-204ENST00000493669 ZNF530Q6P9A1 599 aaPredicted RBP13.53□□□□□ -0.24
PHACTR4-204ENST00000493669 ANKRD44Q8N8A2 993 aa13.53□□□□□ -0.24
PHACTR4-204ENST00000493669 PXDNQ92626 1479 aa13.53□□□□□ -0.24
PHACTR4-204ENST00000493669 LRRC59Q96AG4 307 aaKnown RBP13.53□□□□□ -0.24
PHACTR4-204ENST00000493669 C1orf115Q9H7X2 142 aa13.53□□□□□ -0.24
PHACTR4-204ENST00000493669 ERBB3P21860 1342 aa13.53□□□□□ -0.24
PHACTR4-204ENST00000493669 ADAMTS7Q9UKP4 1686 aa13.52□□□□□ -0.24
PHACTR4-204ENST00000493669 C1orf141Q5JVX7 400 aa13.52□□□□□ -0.24
PHACTR4-204ENST00000493669 DCTPP1Q9H773 170 aa13.52□□□□□ -0.24
PHACTR4-204ENST00000493669 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
PHACTR4-204ENST00000493669 CRYBG1Q9Y4K1 1723 aa13.52□□□□□ -0.25
PHACTR4-204ENST00000493669 FLIIQ13045 1269 aa13.51□□□□□ -0.25
PHACTR4-204ENST00000493669 COL18A1P39060 1754 aa13.51□□□□□ -0.25
PHACTR4-204ENST00000493669 STRCQ7RTU9 1775 aa13.51□□□□□ -0.25
PHACTR4-204ENST00000493669 BMP2KLQ5H9B9 411 aa13.51□□□□□ -0.25
PHACTR4-204ENST00000493669 ANKRD45Q5TZF3 282 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms