RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 ANKRD36BQ8N2N9 1353 aa23.85■■□□□ 1.41
NECAB3-214ENST00000493590 USP54Q70EL1 1684 aa23.85■■□□□ 1.41
NECAB3-214ENST00000493590 WWC3Q9ULE0 1092 aa23.84■■□□□ 1.41
NECAB3-214ENST00000493590 ADCY9O60503 1353 aa23.83■■□□□ 1.41
NECAB3-214ENST00000493590 NSD2O96028 1365 aa23.82■■□□□ 1.4
NECAB3-214ENST00000493590 CD2APQ9Y5K6 639 aa23.79■■□□□ 1.4
NECAB3-214ENST00000493590 FAM208AQ9UK61 1670 aaKnown RBP23.79■■□□□ 1.4
NECAB3-214ENST00000493590 ROCK2O75116 1388 aaKnown RBP23.78■■□□□ 1.4
NECAB3-214ENST00000493590 USP47Q96K76 1375 aa23.78■■□□□ 1.4
NECAB3-214ENST00000493590 SBNO2Q9Y2G9 1366 aa23.78■■□□□ 1.4
NECAB3-214ENST00000493590 TMC1Q8TDI8 760 aa23.77■■□□□ 1.4
NECAB3-214ENST00000493590 C5P01031 1676 aa23.76■■□□□ 1.39
NECAB3-214ENST00000493590 CD163L1Q9NR16 1453 aa23.75■■□□□ 1.39
NECAB3-214ENST00000493590 ZCRB1Q8TBF4 217 aaKnown RBP23.74■■□□□ 1.39
NECAB3-214ENST00000493590 IP6K1Q92551 441 aa23.74■■□□□ 1.39
NECAB3-214ENST00000493590 RGPD2P0DJD1 1756 aa23.73■■□□□ 1.39
NECAB3-214ENST00000493590 HDGFL2Q7Z4V5 671 aaPredicted RBP23.73■■□□□ 1.39
NECAB3-214ENST00000493590 L3MBTL2Q969R5 705 aa23.73■■□□□ 1.39
NECAB3-214ENST00000493590 IGSF1Q8N6C5 1336 aa23.73■■□□□ 1.39
NECAB3-214ENST00000493590 KIF3CO14782 793 aa23.72■■□□□ 1.39
NECAB3-214ENST00000493590 MEGF6O75095 1541 aa23.71■■□□□ 1.39
NECAB3-214ENST00000493590 EDC4Q6P2E9 1401 aaKnown RBP23.69■■□□□ 1.38
NECAB3-214ENST00000493590 APLP1P51693 650 aa23.69■■□□□ 1.38
NECAB3-214ENST00000493590 FLAD1Q8NFF5 587 aa23.68■■□□□ 1.38
NECAB3-214ENST00000493590 SLC12A5Q9H2X9 1139 aa23.68■■□□□ 1.38
NECAB3-214ENST00000493590 TAF1LQ8IZX4 1826 aa23.68■■□□□ 1.38
NECAB3-214ENST00000493590 PHF14O94880 888 aa23.67■■□□□ 1.38
NECAB3-214ENST00000493590 AMPHP49418 695 aa23.66■■□□□ 1.38
NECAB3-214ENST00000493590 HOXC9P31274 260 aa23.65■■□□□ 1.38
NECAB3-214ENST00000493590 AK7Q96M32 723 aa23.65■■□□□ 1.38
NECAB3-214ENST00000493590 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
NECAB3-214ENST00000493590 PALLDQ8WX93 1383 aa23.65■■□□□ 1.38
NECAB3-214ENST00000493590 MAP3K19Q56UN5 1328 aa23.64■■□□□ 1.38
NECAB3-214ENST00000493590 SMIM5Q71RC9 77 aa23.64■■□□□ 1.37
NECAB3-214ENST00000493590 USHBP1Q8N6Y0 703 aa23.64■■□□□ 1.37
NECAB3-214ENST00000493590 C4BP0C0L5 1744 aa23.64■■□□□ 1.37
NECAB3-214ENST00000493590 CAPN15O75808 1086 aa23.63■■□□□ 1.37
NECAB3-214ENST00000493590 FBLN1P23142 703 aa23.63■■□□□ 1.37
NECAB3-214ENST00000493590 TERF2IPQ9NYB0 399 aa23.63■■□□□ 1.37
NECAB3-214ENST00000493590 AMIGO3Q86WK7 504 aa23.62■■□□□ 1.37
NECAB3-214ENST00000493590 TOGARAM1Q9Y4F4 1720 aa23.62■■□□□ 1.37
NECAB3-214ENST00000493590 MPRIPQ6WCQ1 1025 aa23.61■■□□□ 1.37
NECAB3-214ENST00000493590 DNAJC5GQ8N7S2 189 aa23.61■■□□□ 1.37
NECAB3-214ENST00000493590 TOMM70O94826 608 aa23.59■■□□□ 1.37
NECAB3-214ENST00000493590 RAPGEF4Q8WZA2 1011 aa23.59■■□□□ 1.37
NECAB3-214ENST00000493590 COG3Q96JB2 828 aa23.59■■□□□ 1.37
NECAB3-214ENST00000493590 UBR3Q6ZT12 1888 aa23.58■■□□□ 1.37
NECAB3-214ENST00000493590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.58■■□□□ 1.37
NECAB3-214ENST00000493590 NBPF6Q5VWK0 638 aa23.58■■□□□ 1.37
NECAB3-214ENST00000493590 NBPF4Q96M43 638 aa23.58■■□□□ 1.37
NECAB3-214ENST00000493590 WDR90Q96KV7 1748 aa23.57■■□□□ 1.36
NECAB3-214ENST00000493590 HMGB2P26583 209 aaKnown RBP23.57■■□□□ 1.36
NECAB3-214ENST00000493590 SIN3AQ96ST3 1273 aa23.57■■□□□ 1.36
NECAB3-214ENST00000493590 CICQ96RK0 1608 aaPredicted RBP23.57■■□□□ 1.36
NECAB3-214ENST00000493590 TATP17735 454 aaPredicted RBP23.56■■□□□ 1.36
NECAB3-214ENST00000493590 NEUROD1Q13562 356 aa23.56■■□□□ 1.36
NECAB3-214ENST00000493590 COL13A1Q5TAT6 717 aaPredicted RBP23.55■■□□□ 1.36
NECAB3-214ENST00000493590 NMRK2Q9NPI5 230 aa23.55■■□□□ 1.36
NECAB3-214ENST00000493590 CGNL1Q0VF96 1302 aa23.55■■□□□ 1.36
NECAB3-214ENST00000493590 PCDH11XQ9BZA7 1347 aa23.55■■□□□ 1.36
NECAB3-214ENST00000493590 PCDH11YQ9BZA8 1340 aa23.55■■□□□ 1.36
NECAB3-214ENST00000493590 NSD3Q9BZ95 1437 aa23.54■■□□□ 1.36
NECAB3-214ENST00000493590 HTRA3P83110 453 aa23.54■■□□□ 1.36
NECAB3-214ENST00000493590 ITGB4P16144 1822 aa23.54■■□□□ 1.36
NECAB3-214ENST00000493590 SMG6Q86US8 1419 aaKnown RBP23.53■■□□□ 1.36
NECAB3-214ENST00000493590 RRS1Q15050 365 aaKnown RBP23.53■■□□□ 1.36
NECAB3-214ENST00000493590 N4BP2Q86UW6 1770 aaPredicted RBP23.52■■□□□ 1.36
NECAB3-214ENST00000493590 SMARCC1Q92922 1105 aaPredicted RBP23.52■■□□□ 1.36
NECAB3-214ENST00000493590 CARD11Q9BXL7 1154 aa23.52■■□□□ 1.36
NECAB3-214ENST00000493590 BCS1LQ9Y276 419 aa23.52■■□□□ 1.36
NECAB3-214ENST00000493590 RTL1A6NKG5 1358 aa23.51■■□□□ 1.35
NECAB3-214ENST00000493590 PXDNLA1KZ92 1463 aa23.5■■□□□ 1.35
NECAB3-214ENST00000493590 SSFA2P28290 1259 aa23.5■■□□□ 1.35
NECAB3-214ENST00000493590 ARHGAP27Q6ZUM4 889 aa23.5■■□□□ 1.35
NECAB3-214ENST00000493590 C16orf71Q8IYS4 520 aaPredicted RBP23.49■■□□□ 1.35
NECAB3-214ENST00000493590 MMP10P09238 476 aa23.48■■□□□ 1.35
NECAB3-214ENST00000493590 LINC00116Q8NCU8 138 aa23.48■■□□□ 1.35
NECAB3-214ENST00000493590 KLRG1Q96E93 195 aa23.48■■□□□ 1.35
NECAB3-214ENST00000493590 A0A0G2JLW4 131 aa23.47■■□□□ 1.35
NECAB3-214ENST00000493590 GNPATO15228 680 aa23.47■■□□□ 1.35
NECAB3-214ENST00000493590 TNS4Q8IZW8 715 aa23.47■■□□□ 1.35
NECAB3-214ENST00000493590 KIAA1551Q9HCM1 1747 aa23.47■■□□□ 1.35
NECAB3-214ENST00000493590 CYP27B1O15528 508 aa23.46■■□□□ 1.35
NECAB3-214ENST00000493590 PIGBQ92521 554 aa23.46■■□□□ 1.35
NECAB3-214ENST00000493590 RBM46Q8TBY0 533 aaKnown RBP23.45■■□□□ 1.34
NECAB3-214ENST00000493590 KIF13BQ9NQT8 1826 aa23.45■■□□□ 1.34
NECAB3-214ENST00000493590 LOC102724428A0A0B4J2F2 783 aa23.44■■□□□ 1.34
NECAB3-214ENST00000493590 SIK1P57059 783 aa23.44■■□□□ 1.34
NECAB3-214ENST00000493590 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
NECAB3-214ENST00000493590 FCHSD2O94868 740 aa23.42■■□□□ 1.34
NECAB3-214ENST00000493590 HSP90AB2PQ58FF8 381 aa23.42■■□□□ 1.34
NECAB3-214ENST00000493590 GGNBP2Q9H3C7 697 aa23.42■■□□□ 1.34
NECAB3-214ENST00000493590 TGFB2P61812 414 aa23.41■■□□□ 1.34
NECAB3-214ENST00000493590 JMYQ8N9B5 988 aa23.41■■□□□ 1.34
NECAB3-214ENST00000493590 ATP6V1AP38606 617 aa23.4■■□□□ 1.34
NECAB3-214ENST00000493590 ITPK1Q13572 414 aa23.4■■□□□ 1.34
NECAB3-214ENST00000493590 C9orf131Q5VYM1 1079 aa23.4■■□□□ 1.34
NECAB3-214ENST00000493590 PKD1L3Q7Z443 1732 aa23.39■■□□□ 1.34
NECAB3-214ENST00000493590 DPEP1P16444 411 aa23.39■■□□□ 1.33
NECAB3-214ENST00000493590 PRELPP51888 382 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms