RNA–Protein interactions for RNA: ENST00000493542.1

TCN2-207, Transcript of transcobalamin 2, humanhuman

TSL 3

Gene TCN2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-207ENST00000493542 MSH5O43196 834 aa13.16□□□□□ -0.3
TCN2-207ENST00000493542 RGPD2P0DJD1 1756 aa13.16□□□□□ -0.3
TCN2-207ENST00000493542 COL24A1Q17RW2 1714 aa13.16□□□□□ -0.3
TCN2-207ENST00000493542 QSER1Q2KHR3 1735 aa13.16□□□□□ -0.3
TCN2-207ENST00000493542 EDC4Q6P2E9 1401 aaKnown RBP13.15□□□□□ -0.3
TCN2-207ENST00000493542 A0A1W2PP64 1363 aa13.15□□□□□ -0.3
TCN2-207ENST00000493542 TUBGCP6Q96RT7 1819 aa13.15□□□□□ -0.3
TCN2-207ENST00000493542 DDX54Q8TDD1 881 aaKnown RBP13.14□□□□□ -0.31
TCN2-207ENST00000493542 SLC12A5Q9H2X9 1139 aa13.14□□□□□ -0.31
TCN2-207ENST00000493542 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
TCN2-207ENST00000493542 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
TCN2-207ENST00000493542 CARD11Q9BXL7 1154 aa13.13□□□□□ -0.31
TCN2-207ENST00000493542 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
TCN2-207ENST00000493542 ANKRD24Q8TF21 1146 aa13.12□□□□□ -0.31
TCN2-207ENST00000493542 LY75O60449 1722 aa13.12□□□□□ -0.31
TCN2-207ENST00000493542 DOT1LQ8TEK3 1739 aa13.12□□□□□ -0.31
TCN2-207ENST00000493542 ADCY9O60503 1353 aa13.11□□□□□ -0.31
TCN2-207ENST00000493542 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
TCN2-207ENST00000493542 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
TCN2-207ENST00000493542 ZEB1P37275 1124 aaPredicted RBP13.1□□□□□ -0.31
TCN2-207ENST00000493542 HDGFL2Q7Z4V5 671 aaPredicted RBP13.1□□□□□ -0.31
TCN2-207ENST00000493542 TMC1Q8TDI8 760 aa13.1□□□□□ -0.31
TCN2-207ENST00000493542 CCNL1Q9UK58 526 aaPredicted RBP13.1□□□□□ -0.31
TCN2-207ENST00000493542 IP6K1Q92551 441 aa13.09□□□□□ -0.31
TCN2-207ENST00000493542 TESK2Q96S53 571 aa13.09□□□□□ -0.31
TCN2-207ENST00000493542 WWC3Q9ULE0 1092 aa13.09□□□□□ -0.31
TCN2-207ENST00000493542 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
TCN2-207ENST00000493542 KIF3CO14782 793 aa13.08□□□□□ -0.32
TCN2-207ENST00000493542 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
TCN2-207ENST00000493542 APLP1P51693 650 aa13.07□□□□□ -0.32
TCN2-207ENST00000493542 TERF2IPQ9NYB0 399 aa13.07□□□□□ -0.32
TCN2-207ENST00000493542 NSD2O96028 1365 aa13.07□□□□□ -0.32
TCN2-207ENST00000493542 FBLN1P23142 703 aa13.06□□□□□ -0.32
TCN2-207ENST00000493542 DNAJC5GQ8N7S2 189 aa13.06□□□□□ -0.32
TCN2-207ENST00000493542 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
TCN2-207ENST00000493542 MAP3K19Q56UN5 1328 aa13.06□□□□□ -0.32
TCN2-207ENST00000493542 MEGF6O75095 1541 aa13.05□□□□□ -0.32
TCN2-207ENST00000493542 CAPN15O75808 1086 aa13.04□□□□□ -0.32
TCN2-207ENST00000493542 HOXC9P31274 260 aa13.04□□□□□ -0.32
TCN2-207ENST00000493542 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
TCN2-207ENST00000493542 ST20-MTHFSA0A0A6YYL1 179 aa13.03□□□□□ -0.32
TCN2-207ENST00000493542 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
TCN2-207ENST00000493542 USP47Q96K76 1375 aa13.03□□□□□ -0.32
TCN2-207ENST00000493542 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.32
TCN2-207ENST00000493542 COL13A1Q5TAT6 717 aaPredicted RBP13.02□□□□□ -0.33
TCN2-207ENST00000493542 ZCRB1Q8TBF4 217 aaKnown RBP13.02□□□□□ -0.33
TCN2-207ENST00000493542 FLAD1Q8NFF5 587 aa13.01□□□□□ -0.33
TCN2-207ENST00000493542 COG3Q96JB2 828 aa13.01□□□□□ -0.33
TCN2-207ENST00000493542 RTL1A6NKG5 1358 aa13.01□□□□□ -0.33
TCN2-207ENST00000493542 C5P01031 1676 aa13.01□□□□□ -0.33
TCN2-207ENST00000493542 TOGARAM1Q9Y4F4 1720 aa13□□□□□ -0.33
TCN2-207ENST00000493542 TOMM70O94826 608 aa13□□□□□ -0.33
TCN2-207ENST00000493542 ITGB4P16144 1822 aa12.99□□□□□ -0.33
TCN2-207ENST00000493542 FYB1O15117 783 aa12.99□□□□□ -0.33
TCN2-207ENST00000493542 AMPHP49418 695 aa12.99□□□□□ -0.33
TCN2-207ENST00000493542 RRS1Q15050 365 aaKnown RBP12.99□□□□□ -0.33
TCN2-207ENST00000493542 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
TCN2-207ENST00000493542 SMIM5Q71RC9 77 aa12.99□□□□□ -0.33
TCN2-207ENST00000493542 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
TCN2-207ENST00000493542 HTRA3P83110 453 aa12.98□□□□□ -0.33
TCN2-207ENST00000493542 PKD1L3Q7Z443 1732 aa12.98□□□□□ -0.33
TCN2-207ENST00000493542 ANKRD26Q9UPS8 1709 aa12.98□□□□□ -0.33
TCN2-207ENST00000493542 PHF14O94880 888 aa12.97□□□□□ -0.33
TCN2-207ENST00000493542 HSPA5P11021 654 aaKnown RBP12.97□□□□□ -0.33
TCN2-207ENST00000493542 AMIGO3Q86WK7 504 aa12.97□□□□□ -0.33
TCN2-207ENST00000493542 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
TCN2-207ENST00000493542 AK7Q96M32 723 aa12.96□□□□□ -0.33
TCN2-207ENST00000493542 GGNBP2Q9H3C7 697 aa12.96□□□□□ -0.33
TCN2-207ENST00000493542 NMRK2Q9NPI5 230 aa12.96□□□□□ -0.33
TCN2-207ENST00000493542 PALLDQ8WX93 1383 aa12.95□□□□□ -0.34
TCN2-207ENST00000493542 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
TCN2-207ENST00000493542 CGNL1Q0VF96 1302 aa12.95□□□□□ -0.34
TCN2-207ENST00000493542 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
TCN2-207ENST00000493542 TNS4Q8IZW8 715 aa12.95□□□□□ -0.34
TCN2-207ENST00000493542 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
TCN2-207ENST00000493542 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
TCN2-207ENST00000493542 INSRP06213 1382 aa12.94□□□□□ -0.34
TCN2-207ENST00000493542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.94□□□□□ -0.34
TCN2-207ENST00000493542 HMGB2P26583 209 aaKnown RBP12.94□□□□□ -0.34
TCN2-207ENST00000493542 HSP90AB2PQ58FF8 381 aa12.94□□□□□ -0.34
TCN2-207ENST00000493542 MPRIPQ6WCQ1 1025 aa12.94□□□□□ -0.34
TCN2-207ENST00000493542 JMYQ8N9B5 988 aa12.94□□□□□ -0.34
TCN2-207ENST00000493542 NCAPD2Q15021 1401 aa12.94□□□□□ -0.34
TCN2-207ENST00000493542 C4BP0C0L5 1744 aa12.93□□□□□ -0.34
TCN2-207ENST00000493542 PRELPP51888 382 aa12.93□□□□□ -0.34
TCN2-207ENST00000493542 EIF4G2P78344 907 aaKnown RBP eCLIP12.93□□□□□ -0.34
TCN2-207ENST00000493542 FLT4P35916 1363 aa12.93□□□□□ -0.34
TCN2-207ENST00000493542 KIF24Q5T7B8 1368 aa12.93□□□□□ -0.34
TCN2-207ENST00000493542 TMF1P82094 1093 aa12.92□□□□□ -0.34
TCN2-207ENST00000493542 ARHGAP27Q6ZUM4 889 aa12.92□□□□□ -0.34
TCN2-207ENST00000493542 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
TCN2-207ENST00000493542 C16orf71Q8IYS4 520 aaPredicted RBP12.92□□□□□ -0.34
TCN2-207ENST00000493542 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
TCN2-207ENST00000493542 WDR90Q96KV7 1748 aa12.92□□□□□ -0.34
TCN2-207ENST00000493542 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
TCN2-207ENST00000493542 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
TCN2-207ENST00000493542 CYP27B1O15528 508 aa12.91□□□□□ -0.34
TCN2-207ENST00000493542 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
TCN2-207ENST00000493542 CARD14Q9BXL6 1004 aa12.91□□□□□ -0.34
TCN2-207ENST00000493542 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms