RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 ANKRD45Q5TZF3 282 aa8.21□□□□□ -1.1
EWSR1-220ENST00000493426 INTS3Q68E01 1043 aaKnown RBP8.21□□□□□ -1.1
EWSR1-220ENST00000493426 KIAA1524Q8TCG1 905 aa8.21□□□□□ -1.1
EWSR1-220ENST00000493426 IPO4Q8TEX9 1081 aaKnown RBP8.21□□□□□ -1.1
EWSR1-220ENST00000493426 BBXQ8WY36 941 aaPredicted RBP8.21□□□□□ -1.1
EWSR1-220ENST00000493426 BCL2L13Q9BXK5 485 aa8.21□□□□□ -1.1
EWSR1-220ENST00000493426 DCTPP1Q9H773 170 aa8.21□□□□□ -1.1
EWSR1-220ENST00000493426 BCL2L12Q9HB09 334 aa8.21□□□□□ -1.1
EWSR1-220ENST00000493426 MORC2Q9Y6X9 1032 aaPredicted RBP8.21□□□□□ -1.1
EWSR1-220ENST00000493426 ABCA9Q8IUA7 1624 aa8.21□□□□□ -1.1
EWSR1-220ENST00000493426 ANKRD36BQ8N2N9 1353 aa8.21□□□□□ -1.1
EWSR1-220ENST00000493426 TTC22Q5TAA0 569 aa8.2□□□□□ -1.1
EWSR1-220ENST00000493426 PLEKHM2Q8IWE5 1019 aa8.2□□□□□ -1.1
EWSR1-220ENST00000493426 PRDM10Q9NQV6 1147 aa8.2□□□□□ -1.1
EWSR1-220ENST00000493426 FAM53CQ9NYF3 392 aa8.2□□□□□ -1.1
EWSR1-220ENST00000493426 RRP7AQ9Y3A4 280 aaKnown RBP8.2□□□□□ -1.1
EWSR1-220ENST00000493426 SPAG9O60271 1321 aaKnown RBP8.2□□□□□ -1.1
EWSR1-220ENST00000493426 NSD3Q9BZ95 1437 aa8.2□□□□□ -1.1
EWSR1-220ENST00000493426 DEPDC5O75140 1603 aa8.19□□□□□ -1.1
EWSR1-220ENST00000493426 SYCE3A1L190 88 aa8.19□□□□□ -1.1
EWSR1-220ENST00000493426 REC8O95072 547 aa8.19□□□□□ -1.1
EWSR1-220ENST00000493426 PTMAP06454 111 aaKnown RBP8.19□□□□□ -1.1
EWSR1-220ENST00000493426 ANAPC15P60006 121 aa8.19□□□□□ -1.1
EWSR1-220ENST00000493426 CBX1P83916 185 aa8.19□□□□□ -1.1
EWSR1-220ENST00000493426 CD109Q6YHK3 1445 aa8.19□□□□□ -1.1
EWSR1-220ENST00000493426 VWDEQ8N2E2 1590 aa8.18□□□□□ -1.1
EWSR1-220ENST00000493426 ABCA6Q8N139 1617 aa8.18□□□□□ -1.1
EWSR1-220ENST00000493426 KDM4AO75164 1064 aa8.18□□□□□ -1.1
EWSR1-220ENST00000493426 NEUROD2Q15784 382 aa8.18□□□□□ -1.1
EWSR1-220ENST00000493426 SIRT2Q8IXJ6 389 aa8.18□□□□□ -1.1
EWSR1-220ENST00000493426 MRPL50Q8N5N7 158 aaKnown RBP8.18□□□□□ -1.1
EWSR1-220ENST00000493426 OSBPL3Q9H4L5 887 aa8.18□□□□□ -1.1
EWSR1-220ENST00000493426 RBM27Q9P2N5 1060 aaKnown RBP8.18□□□□□ -1.1
EWSR1-220ENST00000493426 DDX41Q9UJV9 622 aaKnown RBP8.18□□□□□ -1.1
EWSR1-220ENST00000493426 ABCC4O15439 1325 aa8.18□□□□□ -1.1
EWSR1-220ENST00000493426 RTL1A6NKG5 1358 aa8.18□□□□□ -1.1
EWSR1-220ENST00000493426 CCDC66A2RUB6 948 aa8.17□□□□□ -1.1
EWSR1-220ENST00000493426 SLFN14P0C7P3 912 aa8.17□□□□□ -1.1
EWSR1-220ENST00000493426 U2AF1L5P0DN76 240 aaPredicted RBP8.17□□□□□ -1.1
EWSR1-220ENST00000493426 GSPT1P15170 499 aaKnown RBP8.17□□□□□ -1.1
EWSR1-220ENST00000493426 U2AF1Q01081 240 aaKnown RBP eCLIP8.17□□□□□ -1.14e-17■□□□□ 10
EWSR1-220ENST00000493426 CHAF1AQ13111 956 aaPredicted RBP8.17□□□□□ -1.1
EWSR1-220ENST00000493426 DNTTIP2Q5QJE6 756 aaKnown RBP8.17□□□□□ -1.1
EWSR1-220ENST00000493426 CCDC183Q5T5S1 534 aa8.17□□□□□ -1.1
EWSR1-220ENST00000493426 CASC1Q6TDU7 716 aa8.17□□□□□ -1.1
EWSR1-220ENST00000493426 RPAP2Q8IXW5 612 aaPredicted RBP8.17□□□□□ -1.1
EWSR1-220ENST00000493426 API5Q9BZZ5 524 aaKnown RBP8.17□□□□□ -1.1
EWSR1-220ENST00000493426 TSPYL1Q9H0U9 437 aa8.17□□□□□ -1.1
EWSR1-220ENST00000493426 CGNQ9P2M7 1197 aaKnown RBP8.17□□□□□ -1.1
EWSR1-220ENST00000493426 CTNNA3Q9UI47 895 aa8.17□□□□□ -1.1
EWSR1-220ENST00000493426 NSFL1CQ9UNZ2 370 aaKnown RBP8.17□□□□□ -1.1
EWSR1-220ENST00000493426 PNPLA6Q8IY17 1366 aa8.17□□□□□ -1.1
EWSR1-220ENST00000493426 FANCAO15360 1455 aa8.17□□□□□ -1.1
EWSR1-220ENST00000493426 COL3A1P02461 1466 aaPredicted RBP8.17□□□□□ -1.1
EWSR1-220ENST00000493426 INO80Q9ULG1 1556 aaPredicted RBP8.17□□□□□ -1.1
EWSR1-220ENST00000493426 TULP2O00295 520 aa8.16□□□□□ -1.1
EWSR1-220ENST00000493426 TET3O43151 1660 aa8.16□□□□□ -1.1
EWSR1-220ENST00000493426 VAMP4O75379 141 aa8.16□□□□□ -1.1
EWSR1-220ENST00000493426 ADCY5O95622 1261 aa8.16□□□□□ -1.1
EWSR1-220ENST00000493426 MX1P20591 662 aa8.16□□□□□ -1.1
EWSR1-220ENST00000493426 PKP1Q13835 747 aa8.16□□□□□ -1.1
EWSR1-220ENST00000493426 ZFYVE16Q7Z3T8 1539 aa8.16□□□□□ -1.1
EWSR1-220ENST00000493426 FUCA2Q9BTY2 467 aa8.16□□□□□ -1.1
EWSR1-220ENST00000493426 C14orf93Q9H972 538 aaKnown RBP8.16□□□□□ -1.1
EWSR1-220ENST00000493426 NAP1L2Q9ULW6 460 aaPredicted RBP8.16□□□□□ -1.1
EWSR1-220ENST00000493426 PAXBP1Q9Y5B6 917 aa8.16□□□□□ -1.1
EWSR1-220ENST00000493426 LMTK2Q8IWU2 1503 aa8.15□□□□□ -1.1
EWSR1-220ENST00000493426 WDR33Q9C0J8 1336 aaKnown RBP8.15□□□□□ -1.1
EWSR1-220ENST00000493426 SMTNL1A8MU46 457 aa8.15□□□□□ -1.1
EWSR1-220ENST00000493426 GOLGA6L6A8MZA4 724 aa8.15□□□□□ -1.1
EWSR1-220ENST00000493426 RIOK3O14730 519 aaKnown RBP8.15□□□□□ -1.1
EWSR1-220ENST00000493426 ERC2O15083 957 aa8.15□□□□□ -1.1
EWSR1-220ENST00000493426 FCHSD2O94868 740 aa8.15□□□□□ -1.1
EWSR1-220ENST00000493426 PDIA4P13667 645 aaKnown RBP8.15□□□□□ -1.1
EWSR1-220ENST00000493426 CFAP70Q5T0N1 1121 aa8.15□□□□□ -1.1
EWSR1-220ENST00000493426 ZGPATQ8N5A5 531 aaKnown RBP8.15□□□□□ -1.1
EWSR1-220ENST00000493426 TSR2Q969E8 191 aaKnown RBP8.15□□□□□ -1.1
EWSR1-220ENST00000493426 TMX3Q96JJ7 454 aa8.15□□□□□ -1.1
EWSR1-220ENST00000493426 CDC42BPGQ6DT37 1551 aa8.14□□□□□ -1.11
EWSR1-220ENST00000493426 ATP7AQ04656 1500 aa8.14□□□□□ -1.11
EWSR1-220ENST00000493426 RPGRIP1LQ68CZ1 1315 aa8.14□□□□□ -1.11
EWSR1-220ENST00000493426 ZNF853P0CG23 659 aa8.14□□□□□ -1.11
EWSR1-220ENST00000493426 TERF2Q15554 542 aa8.14□□□□□ -1.11
EWSR1-220ENST00000493426 SLFNL1Q499Z3 407 aa8.14□□□□□ -1.11
EWSR1-220ENST00000493426 ANKRD44Q8N8A2 993 aa8.14□□□□□ -1.11
EWSR1-220ENST00000493426 DNAJC2Q99543 621 aaKnown RBP8.14□□□□□ -1.11
EWSR1-220ENST00000493426 SSH2Q76I76 1423 aa8.13□□□□□ -1.11
EWSR1-220ENST00000493426 UBE2HP62256 183 aa8.13□□□□□ -1.11
EWSR1-220ENST00000493426 RNF214Q8ND24 703 aa8.13□□□□□ -1.11
EWSR1-220ENST00000493426 SLC12A5Q9H2X9 1139 aa8.13□□□□□ -1.11
EWSR1-220ENST00000493426 TTC12Q9H892 705 aaPredicted RBP8.13□□□□□ -1.11
EWSR1-220ENST00000493426 KCND1Q9NSA2 647 aa8.13□□□□□ -1.11
EWSR1-220ENST00000493426 CALCOCO1Q9P1Z2 691 aa8.13□□□□□ -1.11
EWSR1-220ENST00000493426 NEO1Q92859 1461 aa8.13□□□□□ -1.11
EWSR1-220ENST00000493426 RPAP1Q9BWH6 1393 aaPredicted RBP8.12□□□□□ -1.11
EWSR1-220ENST00000493426 ADGRF5Q8IZF2 1346 aa8.12□□□□□ -1.11
EWSR1-220ENST00000493426 SDSP20132 328 aa8.12□□□□□ -1.11
EWSR1-220ENST00000493426 U2AF2P26368 475 aaKnown RBP eCLIP8.12□□□□□ -1.115e-12■■■□□ 16.6
EWSR1-220ENST00000493426 FXR2P51116 673 aaKnown RBP eCLIP8.12□□□□□ -1.11
EWSR1-220ENST00000493426 NCBP1Q09161 790 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms