RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 PRIMPOLQ96LW4 560 aa20.06■□□□□ 0.8
KLF4-204ENST00000493306 KNDC1Q76NI1 1749 aa20.06■□□□□ 0.8
KLF4-204ENST00000493306 HMGN5P82970 282 aaKnown RBP20.06■□□□□ 0.8
KLF4-204ENST00000493306 ANKRD44Q8N8A2 993 aa20.06■□□□□ 0.8
KLF4-204ENST00000493306 MCM2P49736 904 aa20.05■□□□□ 0.8
KLF4-204ENST00000493306 OTUD7AQ8TE49 926 aaPredicted RBP20.05■□□□□ 0.8
KLF4-204ENST00000493306 PDIA4P13667 645 aaKnown RBP20.04■□□□□ 0.8
KLF4-204ENST00000493306 RPAP2Q8IXW5 612 aaPredicted RBP20.04■□□□□ 0.8
KLF4-204ENST00000493306 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
KLF4-204ENST00000493306 TMX3Q96JJ7 454 aa20.04■□□□□ 0.8
KLF4-204ENST00000493306 PHACTR3Q96KR7 559 aa20.04■□□□□ 0.8
KLF4-204ENST00000493306 YEATS2Q9ULM3 1422 aa20.04■□□□□ 0.8
KLF4-204ENST00000493306 BRD1O95696 1058 aa20.04■□□□□ 0.8
KLF4-204ENST00000493306 ZNF853P0CG23 659 aa20.04■□□□□ 0.8
KLF4-204ENST00000493306 NEK4P51957 841 aa20.04■□□□□ 0.8
KLF4-204ENST00000493306 HMOX1P09601 288 aa20.03■□□□□ 0.8
KLF4-204ENST00000493306 FAM184AQ8NB25 1140 aa20.03■□□□□ 0.8
KLF4-204ENST00000493306 STK26Q9P289 416 aa20.03■□□□□ 0.8
KLF4-204ENST00000493306 KIDINS220Q9ULH0 1771 aa20.03■□□□□ 0.8
KLF4-204ENST00000493306 UTP14CQ5TAP6 766 aaKnown RBP20.03■□□□□ 0.8
KLF4-204ENST00000493306 LMOD3Q0VAK6 560 aa20.02■□□□□ 0.8
KLF4-204ENST00000493306 APBB1O00213 710 aa20.02■□□□□ 0.79
KLF4-204ENST00000493306 C8orf58Q8NAV2 365 aa20.02■□□□□ 0.79
KLF4-204ENST00000493306 PIBF1Q8WXW3 757 aa20.02■□□□□ 0.79
KLF4-204ENST00000493306 CD163L1Q9NR16 1453 aa20.01■□□□□ 0.79
KLF4-204ENST00000493306 DMTNQ08495 405 aa20.01■□□□□ 0.79
KLF4-204ENST00000493306 UVSSAQ2YD98 709 aa20.01■□□□□ 0.79
KLF4-204ENST00000493306 ATP10DQ9P241 1426 aa20.01■□□□□ 0.79
KLF4-204ENST00000493306 SMARCA5O60264 1052 aaPredicted RBP20■□□□□ 0.79
KLF4-204ENST00000493306 KIF20BQ96Q89 1820 aa20■□□□□ 0.79
KLF4-204ENST00000493306 MINK1Q8N4C8 1332 aaPredicted RBP20■□□□□ 0.79
KLF4-204ENST00000493306 ZBTB7CA1YPR0 619 aa20■□□□□ 0.79
KLF4-204ENST00000493306 CEP85Q6P2H3 762 aa20■□□□□ 0.79
KLF4-204ENST00000493306 GGT6Q6P531 493 aa20■□□□□ 0.79
KLF4-204ENST00000493306 ASXL2Q76L83 1435 aa19.99■□□□□ 0.79
KLF4-204ENST00000493306 MCCP23508 829 aa19.99■□□□□ 0.79
KLF4-204ENST00000493306 NOLC1Q14978 699 aaKnown RBP eCLIP19.99■□□□□ 0.79
KLF4-204ENST00000493306 NEXMIFQ5QGS0 1516 aa19.99■□□□□ 0.79
KLF4-204ENST00000493306 INTS4Q96HW7 963 aaKnown RBP19.98■□□□□ 0.79
KLF4-204ENST00000493306 POLKQ9UBT6 870 aa19.98■□□□□ 0.79
KLF4-204ENST00000493306 ZHX1Q9UKY1 873 aaPredicted RBP19.98■□□□□ 0.79
KLF4-204ENST00000493306 GTF2F1P35269 517 aaKnown RBP eCLIP19.98■□□□□ 0.79
KLF4-204ENST00000493306 CUL4AQ13619 759 aa19.98■□□□□ 0.79
KLF4-204ENST00000493306 FRMPD1Q5SYB0 1578 aa19.97■□□□□ 0.79
KLF4-204ENST00000493306 HAP1P54257 671 aaPredicted RBP19.96■□□□□ 0.79
KLF4-204ENST00000493306 KIF3AQ9Y496 699 aa19.96■□□□□ 0.79
KLF4-204ENST00000493306 ABCC3O15438 1527 aa19.96■□□□□ 0.79
KLF4-204ENST00000493306 ZSCAN20P17040 1043 aaPredicted RBP19.96■□□□□ 0.79
KLF4-204ENST00000493306 USP25Q9UHP3 1055 aa19.96■□□□□ 0.79
KLF4-204ENST00000493306 CLTCQ00610 1675 aaKnown RBP19.95■□□□□ 0.78
KLF4-204ENST00000493306 RIMS2Q9UQ26 1411 aa19.95■□□□□ 0.78
KLF4-204ENST00000493306 HMMRO75330 724 aa19.95■□□□□ 0.78
KLF4-204ENST00000493306 ZNF830Q96NB3 372 aaPredicted RBP19.95■□□□□ 0.78
KLF4-204ENST00000493306 PRAM1Q96QH2 718 aa19.95■□□□□ 0.78
KLF4-204ENST00000493306 HECW2Q9P2P5 1572 aa19.94■□□□□ 0.78
KLF4-204ENST00000493306 ZNF710Q8N1W2 664 aa19.94■□□□□ 0.78
KLF4-204ENST00000493306 RTL1A6NKG5 1358 aa19.94■□□□□ 0.78
KLF4-204ENST00000493306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.94■□□□□ 0.78
KLF4-204ENST00000493306 MPNDQ8N594 471 aa19.94■□□□□ 0.78
KLF4-204ENST00000493306 BCL11BQ9C0K0 894 aaPredicted RBP19.94■□□□□ 0.78
KLF4-204ENST00000493306 PIK3C2BO00750 1634 aa19.93■□□□□ 0.78
KLF4-204ENST00000493306 OSBPL3Q9H4L5 887 aa19.93■□□□□ 0.78
KLF4-204ENST00000493306 CABP1Q9NZU7 370 aa19.93■□□□□ 0.78
KLF4-204ENST00000493306 ADCY5O95622 1261 aa19.93■□□□□ 0.78
KLF4-204ENST00000493306 FBLN1P23142 703 aa19.93■□□□□ 0.78
KLF4-204ENST00000493306 NOL8Q76FK4 1167 aaKnown RBP19.93■□□□□ 0.78
KLF4-204ENST00000493306 TSC1Q92574 1164 aa19.93■□□□□ 0.78
KLF4-204ENST00000493306 WDR33Q9C0J8 1336 aaKnown RBP19.93■□□□□ 0.78
KLF4-204ENST00000493306 MSH6P52701 1360 aa19.93■□□□□ 0.78
KLF4-204ENST00000493306 PTPRMP28827 1452 aa19.93■□□□□ 0.78
KLF4-204ENST00000493306 ARHGEF40Q8TER5 1519 aa19.93■□□□□ 0.78
KLF4-204ENST00000493306 YTHDC2Q9H6S0 1430 aaKnown RBP19.92■□□□□ 0.78
KLF4-204ENST00000493306 PDE1AP54750 535 aa19.92■□□□□ 0.78
KLF4-204ENST00000493306 ANAPC15P60006 121 aa19.92■□□□□ 0.78
KLF4-204ENST00000493306 FOXD4L6Q3SYB3 417 aaPredicted RBP19.92■□□□□ 0.78
KLF4-204ENST00000493306 FOXD4L3Q6VB84 417 aaPredicted RBP19.92■□□□□ 0.78
KLF4-204ENST00000493306 GTPBP4Q9BZE4 634 aaKnown RBP19.92■□□□□ 0.78
KLF4-204ENST00000493306 TTC12Q9H892 705 aaPredicted RBP19.92■□□□□ 0.78
KLF4-204ENST00000493306 GDPD2Q9HCC8 539 aa19.92■□□□□ 0.78
KLF4-204ENST00000493306 GADD45BO75293 160 aaPredicted RBP19.92■□□□□ 0.78
KLF4-204ENST00000493306 FKBP5Q13451 457 aaPredicted RBP19.92■□□□□ 0.78
KLF4-204ENST00000493306 CCDC183Q5T5S1 534 aa19.92■□□□□ 0.78
KLF4-204ENST00000493306 USP48Q86UV5 1035 aa19.92■□□□□ 0.78
KLF4-204ENST00000493306 JARID2Q92833 1246 aaPredicted RBP19.92■□□□□ 0.78
KLF4-204ENST00000493306 LETM1O95202 739 aaPredicted RBP19.91■□□□□ 0.78
KLF4-204ENST00000493306 CBX1P83916 185 aa19.91■□□□□ 0.78
KLF4-204ENST00000493306 MAP2P11137 1827 aaKnown RBP19.91■□□□□ 0.78
KLF4-204ENST00000493306 PPP4R3BQ5MIZ7 849 aa19.91■□□□□ 0.78
KLF4-204ENST00000493306 ESYT1Q9BSJ8 1104 aa19.91■□□□□ 0.78
KLF4-204ENST00000493306 SPTLC3Q9NUV7 552 aa19.91■□□□□ 0.78
KLF4-204ENST00000493306 DLG5Q8TDM6 1919 aa19.91■□□□□ 0.78
KLF4-204ENST00000493306 MEIS3Q99687 375 aa19.9■□□□□ 0.78
KLF4-204ENST00000493306 CDK19Q9BWU1 502 aa19.9■□□□□ 0.78
KLF4-204ENST00000493306 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
KLF4-204ENST00000493306 CPSF1Q10570 1443 aaKnown RBP19.9■□□□□ 0.78
KLF4-204ENST00000493306 IL13P35225 146 aa19.9■□□□□ 0.78
KLF4-204ENST00000493306 FAM83GA6ND36 823 aa19.89■□□□□ 0.78
KLF4-204ENST00000493306 CHAF1AQ13111 956 aaPredicted RBP19.89■□□□□ 0.78
KLF4-204ENST00000493306 PTPRCP08575 1304 aa19.89■□□□□ 0.77
KLF4-204ENST00000493306 RGS12O14924 1447 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms