RNA–Protein interactions for RNA: ENST00000492819.1

CCDC12-206, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-206ENST00000492819 PRIM1P49642 420 aaKnown RBP23.81■■□□□ 1.4
CCDC12-206ENST00000492819 QSER1Q2KHR3 1735 aa23.81■■□□□ 1.4
CCDC12-206ENST00000492819 COL24A1Q17RW2 1714 aa23.8■■□□□ 1.4
CCDC12-206ENST00000492819 SLC27A3Q5K4L6 730 aa23.79■■□□□ 1.4
CCDC12-206ENST00000492819 SYTL4Q96C24 671 aaPredicted RBP23.79■■□□□ 1.4
CCDC12-206ENST00000492819 COG3Q96JB2 828 aa23.79■■□□□ 1.4
CCDC12-206ENST00000492819 ANKRD36BQ8N2N9 1353 aa23.78■■□□□ 1.4
CCDC12-206ENST00000492819 LY75O60449 1722 aa23.78■■□□□ 1.4
CCDC12-206ENST00000492819 AMPHP49418 695 aa23.77■■□□□ 1.4
CCDC12-206ENST00000492819 RRS1Q15050 365 aaKnown RBP23.77■■□□□ 1.4
CCDC12-206ENST00000492819 ZCRB1Q8TBF4 217 aaKnown RBP23.76■■□□□ 1.39
CCDC12-206ENST00000492819 NBPF6Q5VWK0 638 aa23.75■■□□□ 1.39
CCDC12-206ENST00000492819 USHBP1Q8N6Y0 703 aa23.75■■□□□ 1.39
CCDC12-206ENST00000492819 SLC16A10Q8TF71 515 aa23.75■■□□□ 1.39
CCDC12-206ENST00000492819 NBPF4Q96M43 638 aa23.75■■□□□ 1.39
CCDC12-206ENST00000492819 KLHL34Q8N239 644 aa23.74■■□□□ 1.39
CCDC12-206ENST00000492819 TFCP2L1Q9NZI6 479 aa23.74■■□□□ 1.39
CCDC12-206ENST00000492819 GGNBP2Q9H3C7 697 aa23.73■■□□□ 1.39
CCDC12-206ENST00000492819 FYB1O15117 783 aa23.72■■□□□ 1.39
CCDC12-206ENST00000492819 NLGN2Q8NFZ4 835 aa23.72■■□□□ 1.39
CCDC12-206ENST00000492819 CLSPNQ9HAW4 1339 aa23.72■■□□□ 1.39
CCDC12-206ENST00000492819 GPR162Q16538 588 aa23.71■■□□□ 1.39
CCDC12-206ENST00000492819 RTL1A6NKG5 1358 aa23.7■■□□□ 1.38
CCDC12-206ENST00000492819 POLD1P28340 1107 aa23.69■■□□□ 1.38
CCDC12-206ENST00000492819 CCNL1Q9UK58 526 aaPredicted RBP23.69■■□□□ 1.38
CCDC12-206ENST00000492819 COL23A1Q86Y22 540 aaPredicted RBP23.67■■□□□ 1.38
CCDC12-206ENST00000492819 HSP90AB2PQ58FF8 381 aa23.66■■□□□ 1.38
CCDC12-206ENST00000492819 PELP1Q8IZL8 1130 aaKnown RBP23.66■■□□□ 1.38
CCDC12-206ENST00000492819 USP47Q96K76 1375 aa23.65■■□□□ 1.38
CCDC12-206ENST00000492819 C1QTNF8P60827 252 aa23.64■■□□□ 1.37
CCDC12-206ENST00000492819 MSL1Q68DK7 614 aa23.64■■□□□ 1.37
CCDC12-206ENST00000492819 YBX3P16989 372 aaKnown RBP eCLIP23.63■■□□□ 1.37
CCDC12-206ENST00000492819 RAPGEF4Q8WZA2 1011 aa23.62■■□□□ 1.37
CCDC12-206ENST00000492819 CEP350Q5VT06 3117 aa23.62■■□□□ 1.37
CCDC12-206ENST00000492819 INSRP06213 1382 aa23.62■■□□□ 1.37
CCDC12-206ENST00000492819 TOGARAM1Q9Y4F4 1720 aa23.62■■□□□ 1.37
CCDC12-206ENST00000492819 CGNL1Q0VF96 1302 aa23.61■■□□□ 1.37
CCDC12-206ENST00000492819 KIF20BQ96Q89 1820 aa23.61■■□□□ 1.37
CCDC12-206ENST00000492819 C5P01031 1676 aa23.61■■□□□ 1.37
CCDC12-206ENST00000492819 MSH5O43196 834 aa23.61■■□□□ 1.37
CCDC12-206ENST00000492819 CCER1Q8TC90 406 aaPredicted RBP23.61■■□□□ 1.37
CCDC12-206ENST00000492819 SENP3-EIF4A1A0A087X0R7 540 aa23.6■■□□□ 1.37
CCDC12-206ENST00000492819 CYP27B1O15528 508 aa23.6■■□□□ 1.37
CCDC12-206ENST00000492819 TATP17735 454 aaPredicted RBP23.6■■□□□ 1.37
CCDC12-206ENST00000492819 TMF1P82094 1093 aa23.6■■□□□ 1.37
CCDC12-206ENST00000492819 TAF1LQ8IZX4 1826 aa23.6■■□□□ 1.37
CCDC12-206ENST00000492819 SMG6Q86US8 1419 aaKnown RBP23.59■■□□□ 1.37
CCDC12-206ENST00000492819 SLC24A1O60721 1099 aa23.59■■□□□ 1.37
CCDC12-206ENST00000492819 AMIGO3Q86WK7 504 aa23.59■■□□□ 1.37
CCDC12-206ENST00000492819 CARD14Q9BXL6 1004 aa23.59■■□□□ 1.37
CCDC12-206ENST00000492819 FLT4P35916 1363 aa23.58■■□□□ 1.37
CCDC12-206ENST00000492819 PALLDQ8WX93 1383 aa23.58■■□□□ 1.37
CCDC12-206ENST00000492819 EMILIN1Q9Y6C2 1016 aa23.58■■□□□ 1.37
CCDC12-206ENST00000492819 PCDH11XQ9BZA7 1347 aa23.58■■□□□ 1.36
CCDC12-206ENST00000492819 PCDH11YQ9BZA8 1340 aa23.58■■□□□ 1.36
CCDC12-206ENST00000492819 SMIM5Q71RC9 77 aa23.57■■□□□ 1.36
CCDC12-206ENST00000492819 ITGB4P16144 1822 aa23.56■■□□□ 1.36
CCDC12-206ENST00000492819 MPRIPQ6WCQ1 1025 aa23.56■■□□□ 1.36
CCDC12-206ENST00000492819 TIMELESSQ9UNS1 1208 aa23.56■■□□□ 1.36
CCDC12-206ENST00000492819 PKD1L3Q7Z443 1732 aa23.54■■□□□ 1.36
CCDC12-206ENST00000492819 KIF24Q5T7B8 1368 aa23.52■■□□□ 1.36
CCDC12-206ENST00000492819 NCAPD2Q15021 1401 aa23.52■■□□□ 1.36
CCDC12-206ENST00000492819 NSD3Q9BZ95 1437 aa23.52■■□□□ 1.36
CCDC12-206ENST00000492819 C4BP0C0L5 1744 aa23.52■■□□□ 1.36
CCDC12-206ENST00000492819 GIGYF1O75420 1035 aaPredicted RBP23.51■■□□□ 1.35
CCDC12-206ENST00000492819 PIGBQ92521 554 aa23.51■■□□□ 1.35
CCDC12-206ENST00000492819 MAP2P11137 1827 aaKnown RBP23.5■■□□□ 1.35
CCDC12-206ENST00000492819 UBR3Q6ZT12 1888 aa23.5■■□□□ 1.35
CCDC12-206ENST00000492819 ANKRD26Q9UPS8 1709 aa23.48■■□□□ 1.35
CCDC12-206ENST00000492819 GRIN3BO60391 1043 aa23.48■■□□□ 1.35
CCDC12-206ENST00000492819 PPM1GO15355 546 aaPredicted RBP23.46■■□□□ 1.35
CCDC12-206ENST00000492819 PHF14O94880 888 aa23.46■■□□□ 1.35
CCDC12-206ENST00000492819 NKX1-1Q15270 411 aaPredicted RBP23.46■■□□□ 1.35
CCDC12-206ENST00000492819 FLAD1Q8NFF5 587 aa23.46■■□□□ 1.35
CCDC12-206ENST00000492819 EYA1Q99502 592 aa23.46■■□□□ 1.35
CCDC12-206ENST00000492819 CD2APQ9Y5K6 639 aa23.46■■□□□ 1.35
CCDC12-206ENST00000492819 CDCA8Q53HL2 280 aa23.45■■□□□ 1.34
CCDC12-206ENST00000492819 LINC00116Q8NCU8 138 aa23.45■■□□□ 1.34
CCDC12-206ENST00000492819 SMARCC1Q92922 1105 aaPredicted RBP23.45■■□□□ 1.34
CCDC12-206ENST00000492819 AK7Q96M32 723 aa23.45■■□□□ 1.34
CCDC12-206ENST00000492819 ATP10DQ9P241 1426 aa23.44■■□□□ 1.34
CCDC12-206ENST00000492819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.44■■□□□ 1.34
CCDC12-206ENST00000492819 WWC3Q9ULE0 1092 aa23.44■■□□□ 1.34
CCDC12-206ENST00000492819 WASHC2AQ641Q2 1341 aa23.43■■□□□ 1.34
CCDC12-206ENST00000492819 LOC102724428A0A0B4J2F2 783 aa23.42■■□□□ 1.34
CCDC12-206ENST00000492819 SIK1P57059 783 aa23.42■■□□□ 1.34
CCDC12-206ENST00000492819 ITPK1Q13572 414 aa23.42■■□□□ 1.34
CCDC12-206ENST00000492819 ASAP1Q9ULH1 1129 aa23.42■■□□□ 1.34
CCDC12-206ENST00000492819 POLKQ9UBT6 870 aa23.41■■□□□ 1.34
CCDC12-206ENST00000492819 SPG7Q9UQ90 795 aa23.4■■□□□ 1.34
CCDC12-206ENST00000492819 ADCY9O60503 1353 aa23.4■■□□□ 1.34
CCDC12-206ENST00000492819 IGSF1Q8N6C5 1336 aa23.38■■□□□ 1.33
CCDC12-206ENST00000492819 PHKG2P15735 406 aa23.38■■□□□ 1.33
CCDC12-206ENST00000492819 SSFA2P28290 1259 aa23.37■■□□□ 1.33
CCDC12-206ENST00000492819 TMOD3Q9NYL9 352 aa23.37■■□□□ 1.33
CCDC12-206ENST00000492819 EIF4A2Q14240 407 aaKnown RBP23.36■■□□□ 1.33
CCDC12-206ENST00000492819 ATG3Q9NT62 314 aa23.36■■□□□ 1.33
CCDC12-206ENST00000492819 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.36■■□□□ 1.33
CCDC12-206ENST00000492819 GNPATO15228 680 aa23.35■■□□□ 1.33
CCDC12-206ENST00000492819 HMGB2P26583 209 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms