RNA–Protein interactions for RNA: ENST00000492588.1

C9orf16-204, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 1,570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-204ENST00000492588 NFE2L2Q16236 605 aa23.07■■□□□ 1.28
C9orf16-204ENST00000492588 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
C9orf16-204ENST00000492588 SPATA31A5Q5VU36 1347 aa23.07■■□□□ 1.28
C9orf16-204ENST00000492588 SPATA31A7Q8IWB4 1347 aa23.07■■□□□ 1.28
C9orf16-204ENST00000492588 MEX3CQ5U5Q3 659 aaKnown RBP23.06■■□□□ 1.28
C9orf16-204ENST00000492588 LRRC37A3O60309 1634 aa23.06■■□□□ 1.28
C9orf16-204ENST00000492588 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
C9orf16-204ENST00000492588 AFF2P51816 1311 aa23.06■■□□□ 1.28
C9orf16-204ENST00000492588 CCDC27Q2M243 656 aa23.06■■□□□ 1.28
C9orf16-204ENST00000492588 MTHFSDQ2M296 383 aaKnown RBP23.06■■□□□ 1.28
C9orf16-204ENST00000492588 SUPT16HQ9Y5B9 1047 aaKnown RBP23.06■■□□□ 1.28
C9orf16-204ENST00000492588 GLI3P10071 1580 aa23.05■■□□□ 1.28
C9orf16-204ENST00000492588 ATRNO75882 1429 aa23.04■■□□□ 1.28
C9orf16-204ENST00000492588 NEFMP07197 916 aa23.04■■□□□ 1.28
C9orf16-204ENST00000492588 VPS72Q15906 364 aa23.04■■□□□ 1.28
C9orf16-204ENST00000492588 RAPGEF4Q8WZA2 1011 aa23.04■■□□□ 1.28
C9orf16-204ENST00000492588 USP21Q9UK80 565 aa23.04■■□□□ 1.28
C9orf16-204ENST00000492588 TRIM35Q9UPQ4 493 aa23.04■■□□□ 1.28
C9orf16-204ENST00000492588 GAS2L2Q8NHY3 880 aa23.02■■□□□ 1.28
C9orf16-204ENST00000492588 SALL2Q9Y467 1007 aaPredicted RBP23.02■■□□□ 1.28
C9orf16-204ENST00000492588 THSD7AQ9UPZ6 1657 aa23.02■■□□□ 1.28
C9orf16-204ENST00000492588 RNF123Q5XPI4 1314 aa23.02■■□□□ 1.28
C9orf16-204ENST00000492588 IL2RBP14784 551 aa23.01■■□□□ 1.27
C9orf16-204ENST00000492588 TATP17735 454 aaPredicted RBP23.01■■□□□ 1.27
C9orf16-204ENST00000492588 GOLGA2Q08379 1002 aa23.01■■□□□ 1.27
C9orf16-204ENST00000492588 NEUROD2Q15784 382 aa23.01■■□□□ 1.27
C9orf16-204ENST00000492588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.01■■□□□ 1.27
C9orf16-204ENST00000492588 THRAP3Q9Y2W1 955 aaKnown RBP23.01■■□□□ 1.27
C9orf16-204ENST00000492588 RIPK4P57078 832 aa23.01■■□□□ 1.27
C9orf16-204ENST00000492588 AMOTQ4VCS5 1084 aa23.01■■□□□ 1.27
C9orf16-204ENST00000492588 WWC1Q8IX03 1113 aa23.01■■□□□ 1.27
C9orf16-204ENST00000492588 USP35Q9P2H5 1018 aa23.01■■□□□ 1.27
C9orf16-204ENST00000492588 FKBP8Q14318 412 aa23■■□□□ 1.27
C9orf16-204ENST00000492588 MAP3K5Q99683 1374 aa22.99■■□□□ 1.27
C9orf16-204ENST00000492588 PLEKHO1Q53GL0 409 aaPredicted RBP22.99■■□□□ 1.27
C9orf16-204ENST00000492588 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
C9orf16-204ENST00000492588 BARGINQ6ZT62 677 aa22.98■■□□□ 1.27
C9orf16-204ENST00000492588 TNS2Q63HR2 1409 aa22.98■■□□□ 1.27
C9orf16-204ENST00000492588 E9PSI1 815 aa22.96■■□□□ 1.27
C9orf16-204ENST00000492588 ZNF530Q6P9A1 599 aaPredicted RBP22.96■■□□□ 1.27
C9orf16-204ENST00000492588 SIPA1L3O60292 1781 aaPredicted RBP22.96■■□□□ 1.27
C9orf16-204ENST00000492588 CYP27B1O15528 508 aa22.94■■□□□ 1.26
C9orf16-204ENST00000492588 LMOD3Q0VAK6 560 aa22.94■■□□□ 1.26
C9orf16-204ENST00000492588 WDR63Q8IWG1 891 aa22.94■■□□□ 1.26
C9orf16-204ENST00000492588 TRMT2AQ8IZ69 625 aaKnown RBP22.94■■□□□ 1.26
C9orf16-204ENST00000492588 SPG7Q9UQ90 795 aa22.94■■□□□ 1.26
C9orf16-204ENST00000492588 CEMIPQ8WUJ3 1361 aa22.94■■□□□ 1.26
C9orf16-204ENST00000492588 TOGARAM1Q9Y4F4 1720 aa22.93■■□□□ 1.26
C9orf16-204ENST00000492588 GNAT3A8MTJ3 354 aa22.93■■□□□ 1.26
C9orf16-204ENST00000492588 HTATSF1O43719 755 aaKnown RBP22.93■■□□□ 1.26
C9orf16-204ENST00000492588 AKAP4Q5JQC9 854 aa22.93■■□□□ 1.26
C9orf16-204ENST00000492588 ILDR1Q86SU0 546 aaPredicted RBP22.93■■□□□ 1.26
C9orf16-204ENST00000492588 CDCA7Q9BWT1 371 aaPredicted RBP22.93■■□□□ 1.26
C9orf16-204ENST00000492588 TRPC5Q9UL62 973 aaPredicted RBP22.93■■□□□ 1.26
C9orf16-204ENST00000492588 KDM6AO15550 1401 aaPredicted RBP22.93■■□□□ 1.26
C9orf16-204ENST00000492588 SLFN5Q08AF3 891 aa22.93■■□□□ 1.26
C9orf16-204ENST00000492588 ZCRB1Q8TBF4 217 aaKnown RBP22.93■■□□□ 1.26
C9orf16-204ENST00000492588 RCAN3Q9UKA8 241 aa22.93■■□□□ 1.26
C9orf16-204ENST00000492588 PCDH11XQ9BZA7 1347 aa22.93■■□□□ 1.26
C9orf16-204ENST00000492588 PCDH11YQ9BZA8 1340 aa22.93■■□□□ 1.26
C9orf16-204ENST00000492588 PHKG2P15735 406 aa22.92■■□□□ 1.26
C9orf16-204ENST00000492588 GJD4Q96KN9 370 aaPredicted RBP22.92■■□□□ 1.26
C9orf16-204ENST00000492588 THUMPD2Q9BTF0 503 aaKnown RBP22.92■■□□□ 1.26
C9orf16-204ENST00000492588 SPINK5Q9NQ38 1064 aaPredicted RBP22.92■■□□□ 1.26
C9orf16-204ENST00000492588 CCDC9Q9Y3X0 531 aaKnown RBP22.92■■□□□ 1.26
C9orf16-204ENST00000492588 MRC1P22897 1456 aa22.92■■□□□ 1.26
C9orf16-204ENST00000492588 DCTN1Q14203 1278 aa22.91■■□□□ 1.26
C9orf16-204ENST00000492588 DUSP27Q5VZP5 1158 aa22.91■■□□□ 1.26
C9orf16-204ENST00000492588 CDCA7LQ96GN5 454 aa22.91■■□□□ 1.26
C9orf16-204ENST00000492588 MCM10Q7L590 875 aa22.9■■□□□ 1.26
C9orf16-204ENST00000492588 IL16Q14005 1332 aa22.89■■□□□ 1.26
C9orf16-204ENST00000492588 IFNL2Q8IZJ0 200 aa22.89■■□□□ 1.26
C9orf16-204ENST00000492588 IL17REQ8NFR9 667 aa22.89■■□□□ 1.26
C9orf16-204ENST00000492588 FAM98CQ17RN3 349 aaKnown RBP22.89■■□□□ 1.25
C9orf16-204ENST00000492588 C1orf141Q5JVX7 400 aa22.89■■□□□ 1.25
C9orf16-204ENST00000492588 KDM3BQ7LBC6 1761 aa22.87■■□□□ 1.25
C9orf16-204ENST00000492588 ONECUT3O60422 494 aaPredicted RBP22.87■■□□□ 1.25
C9orf16-204ENST00000492588 ZNF772Q68DY9 489 aaPredicted RBP22.87■■□□□ 1.25
C9orf16-204ENST00000492588 QTRT2Q9H974 415 aaKnown RBP22.87■■□□□ 1.25
C9orf16-204ENST00000492588 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
C9orf16-204ENST00000492588 RTF1Q92541 710 aaKnown RBP22.86■■□□□ 1.25
C9orf16-204ENST00000492588 ZNF853P0CG23 659 aa22.85■■□□□ 1.25
C9orf16-204ENST00000492588 MPRIPQ6WCQ1 1025 aa22.85■■□□□ 1.25
C9orf16-204ENST00000492588 PELP1Q8IZL8 1130 aaKnown RBP22.85■■□□□ 1.25
C9orf16-204ENST00000492588 LGR6Q9HBX8 967 aa22.85■■□□□ 1.25
C9orf16-204ENST00000492588 RGS17Q9UGC6 210 aaPredicted RBP22.85■■□□□ 1.25
C9orf16-204ENST00000492588 RNMTO43148 476 aaKnown RBP22.84■■□□□ 1.25
C9orf16-204ENST00000492588 DOT1LQ8TEK3 1739 aa22.84■■□□□ 1.25
C9orf16-204ENST00000492588 ITGB4P16144 1822 aa22.84■■□□□ 1.25
C9orf16-204ENST00000492588 BRWD3Q6RI45 1802 aa22.84■■□□□ 1.25
C9orf16-204ENST00000492588 DDB1Q16531 1140 aa22.84■■□□□ 1.25
C9orf16-204ENST00000492588 EXOC5O00471 708 aa22.83■■□□□ 1.25
C9orf16-204ENST00000492588 CALD1Q05682 793 aaKnown RBP22.83■■□□□ 1.25
C9orf16-204ENST00000492588 DCAF5Q96JK2 942 aa22.83■■□□□ 1.25
C9orf16-204ENST00000492588 IFT57Q9NWB7 429 aa22.83■■□□□ 1.25
C9orf16-204ENST00000492588 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
C9orf16-204ENST00000492588 PAPPAQ13219 1627 aa22.82■■□□□ 1.24
C9orf16-204ENST00000492588 RRP1P56182 461 aaKnown RBP22.81■■□□□ 1.24
C9orf16-204ENST00000492588 DDX54Q8TDD1 881 aaKnown RBP22.81■■□□□ 1.24
C9orf16-204ENST00000492588 CFAP44Q96MT7 982 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms