RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 LTN1O94822 1766 aa22.37■■□□□ 1.17
CDK11A-220ENST00000492390 NME9Q86XW9 330 aa22.36■■□□□ 1.17
CDK11A-220ENST00000492390 MON2Q7Z3U7 1717 aa22.36■■□□□ 1.17
CDK11A-220ENST00000492390 NSD2O96028 1365 aa22.36■■□□□ 1.17
CDK11A-220ENST00000492390 MSL1Q68DK7 614 aa22.35■■□□□ 1.17
CDK11A-220ENST00000492390 HMGB2P26583 209 aaKnown RBP22.33■■□□□ 1.17
CDK11A-220ENST00000492390 IP6K1Q92551 441 aa22.33■■□□□ 1.17
CDK11A-220ENST00000492390 SBNO2Q9Y2G9 1366 aa22.33■■□□□ 1.17
CDK11A-220ENST00000492390 FLAD1Q8NFF5 587 aa22.32■■□□□ 1.16
CDK11A-220ENST00000492390 USP47Q96K76 1375 aa22.31■■□□□ 1.16
CDK11A-220ENST00000492390 DOT1LQ8TEK3 1739 aa22.31■■□□□ 1.16
CDK11A-220ENST00000492390 KIF3CO14782 793 aa22.3■■□□□ 1.16
CDK11A-220ENST00000492390 APLP1P51693 650 aa22.3■■□□□ 1.16
CDK11A-220ENST00000492390 ZCRB1Q8TBF4 217 aaKnown RBP22.3■■□□□ 1.16
CDK11A-220ENST00000492390 FAM208AQ9UK61 1670 aaKnown RBP22.29■■□□□ 1.16
CDK11A-220ENST00000492390 LTV1Q96GA3 475 aaPredicted RBP22.28■■□□□ 1.16
CDK11A-220ENST00000492390 CD163L1Q9NR16 1453 aa22.28■■□□□ 1.16
CDK11A-220ENST00000492390 HDGFL2Q7Z4V5 671 aaPredicted RBP22.27■■□□□ 1.16
CDK11A-220ENST00000492390 ROCK2O75116 1388 aaKnown RBP22.26■■□□□ 1.15
CDK11A-220ENST00000492390 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
CDK11A-220ENST00000492390 EDC4Q6P2E9 1401 aaKnown RBP22.25■■□□□ 1.15
CDK11A-220ENST00000492390 IGSF1Q8N6C5 1336 aa22.25■■□□□ 1.15
CDK11A-220ENST00000492390 DNAJC5GQ8N7S2 189 aa22.24■■□□□ 1.15
CDK11A-220ENST00000492390 TMC1Q8TDI8 760 aa22.23■■□□□ 1.15
CDK11A-220ENST00000492390 C5P01031 1676 aa22.21■■□□□ 1.15
CDK11A-220ENST00000492390 TOMM70O94826 608 aa22.21■■□□□ 1.15
CDK11A-220ENST00000492390 TERF2IPQ9NYB0 399 aa22.21■■□□□ 1.15
CDK11A-220ENST00000492390 MEGF6O75095 1541 aa22.21■■□□□ 1.15
CDK11A-220ENST00000492390 SLC12A5Q9H2X9 1139 aa22.2■■□□□ 1.14
CDK11A-220ENST00000492390 CGNL1Q0VF96 1302 aa22.2■■□□□ 1.14
CDK11A-220ENST00000492390 HOXC9P31274 260 aa22.19■■□□□ 1.14
CDK11A-220ENST00000492390 MAP3K19Q56UN5 1328 aa22.18■■□□□ 1.14
CDK11A-220ENST00000492390 WWC3Q9ULE0 1092 aa22.18■■□□□ 1.14
CDK11A-220ENST00000492390 PALLDQ8WX93 1383 aa22.17■■□□□ 1.14
CDK11A-220ENST00000492390 AMPHP49418 695 aa22.17■■□□□ 1.14
CDK11A-220ENST00000492390 A0A1W2PP64 1363 aa22.16■■□□□ 1.14
CDK11A-220ENST00000492390 AK7Q96M32 723 aa22.16■■□□□ 1.14
CDK11A-220ENST00000492390 NSD3Q9BZ95 1437 aa22.15■■□□□ 1.14
CDK11A-220ENST00000492390 TAF1LQ8IZX4 1826 aa22.15■■□□□ 1.14
CDK11A-220ENST00000492390 CICQ96RK0 1608 aaPredicted RBP22.15■■□□□ 1.14
CDK11A-220ENST00000492390 RAPGEF4Q8WZA2 1011 aa22.14■■□□□ 1.13
CDK11A-220ENST00000492390 COG3Q96JB2 828 aa22.14■■□□□ 1.13
CDK11A-220ENST00000492390 NBPF6Q5VWK0 638 aa22.13■■□□□ 1.13
CDK11A-220ENST00000492390 SMARCC1Q92922 1105 aaPredicted RBP22.13■■□□□ 1.13
CDK11A-220ENST00000492390 NBPF4Q96M43 638 aa22.13■■□□□ 1.13
CDK11A-220ENST00000492390 C4BP0C0L5 1744 aa22.12■■□□□ 1.13
CDK11A-220ENST00000492390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.12■■□□□ 1.13
CDK11A-220ENST00000492390 MPRIPQ6WCQ1 1025 aa22.12■■□□□ 1.13
CDK11A-220ENST00000492390 AMIGO3Q86WK7 504 aa22.12■■□□□ 1.13
CDK11A-220ENST00000492390 PUS7Q96PZ0 661 aaKnown RBP22.12■■□□□ 1.13
CDK11A-220ENST00000492390 RGPD2P0DJD1 1756 aa22.12■■□□□ 1.13
CDK11A-220ENST00000492390 SSFA2P28290 1259 aa22.11■■□□□ 1.13
CDK11A-220ENST00000492390 PCDH11XQ9BZA7 1347 aa22.1■■□□□ 1.13
CDK11A-220ENST00000492390 PCDH11YQ9BZA8 1340 aa22.1■■□□□ 1.13
CDK11A-220ENST00000492390 PHF14O94880 888 aa22.1■■□□□ 1.13
CDK11A-220ENST00000492390 TATP17735 454 aaPredicted RBP22.1■■□□□ 1.13
CDK11A-220ENST00000492390 COL13A1Q5TAT6 717 aaPredicted RBP22.1■■□□□ 1.13
CDK11A-220ENST00000492390 RTL1A6NKG5 1358 aa22.1■■□□□ 1.13
CDK11A-220ENST00000492390 FBLN1P23142 703 aa22.09■■□□□ 1.13
CDK11A-220ENST00000492390 TOGARAM1Q9Y4F4 1720 aa22.09■■□□□ 1.13
CDK11A-220ENST00000492390 JMYQ8N9B5 988 aa22.08■■□□□ 1.13
CDK11A-220ENST00000492390 RBM46Q8TBY0 533 aaKnown RBP22.08■■□□□ 1.13
CDK11A-220ENST00000492390 KLRG1Q96E93 195 aa22.08■■□□□ 1.13
CDK11A-220ENST00000492390 UBR3Q6ZT12 1888 aa22.08■■□□□ 1.13
CDK11A-220ENST00000492390 USHBP1Q8N6Y0 703 aa22.07■■□□□ 1.12
CDK11A-220ENST00000492390 NMRK2Q9NPI5 230 aa22.07■■□□□ 1.12
CDK11A-220ENST00000492390 TGFB2P61812 414 aa22.06■■□□□ 1.12
CDK11A-220ENST00000492390 SMIM5Q71RC9 77 aa22.06■■□□□ 1.12
CDK11A-220ENST00000492390 WDR90Q96KV7 1748 aa22.06■■□□□ 1.12
CDK11A-220ENST00000492390 SMG6Q86US8 1419 aaKnown RBP22.06■■□□□ 1.12
CDK11A-220ENST00000492390 PXDNLA1KZ92 1463 aa22.04■■□□□ 1.12
CDK11A-220ENST00000492390 CYP27B1O15528 508 aa22.04■■□□□ 1.12
CDK11A-220ENST00000492390 SIN3AQ96ST3 1273 aa22.04■■□□□ 1.12
CDK11A-220ENST00000492390 CARD11Q9BXL7 1154 aa22.04■■□□□ 1.12
CDK11A-220ENST00000492390 BCS1LQ9Y276 419 aa22.04■■□□□ 1.12
CDK11A-220ENST00000492390 FSTL1Q12841 308 aa22.03■■□□□ 1.12
CDK11A-220ENST00000492390 CAPN15O75808 1086 aa22.02■■□□□ 1.12
CDK11A-220ENST00000492390 MMP10P09238 476 aa22.02■■□□□ 1.12
CDK11A-220ENST00000492390 RRS1Q15050 365 aaKnown RBP22.02■■□□□ 1.12
CDK11A-220ENST00000492390 ARHGAP27Q6ZUM4 889 aa22.02■■□□□ 1.12
CDK11A-220ENST00000492390 C16orf71Q8IYS4 520 aaPredicted RBP22.02■■□□□ 1.12
CDK11A-220ENST00000492390 PIGBQ92521 554 aa22.02■■□□□ 1.12
CDK11A-220ENST00000492390 LOC102724428A0A0B4J2F2 783 aa22.01■■□□□ 1.11
CDK11A-220ENST00000492390 PRELPP51888 382 aa22.01■■□□□ 1.11
CDK11A-220ENST00000492390 SIK1P57059 783 aa22.01■■□□□ 1.11
CDK11A-220ENST00000492390 TNS4Q8IZW8 715 aa22.01■■□□□ 1.11
CDK11A-220ENST00000492390 LINC00116Q8NCU8 138 aa22.01■■□□□ 1.11
CDK11A-220ENST00000492390 ITGB4P16144 1822 aa21.99■■□□□ 1.11
CDK11A-220ENST00000492390 KIF13BQ9NQT8 1826 aa21.99■■□□□ 1.11
CDK11A-220ENST00000492390 A0A0G2JLW4 131 aa21.99■■□□□ 1.11
CDK11A-220ENST00000492390 GNPATO15228 680 aa21.99■■□□□ 1.11
CDK11A-220ENST00000492390 HTRA3P83110 453 aa21.99■■□□□ 1.11
CDK11A-220ENST00000492390 NEUROD1Q13562 356 aa21.99■■□□□ 1.11
CDK11A-220ENST00000492390 NKX1-1Q15270 411 aaPredicted RBP21.98■■□□□ 1.11
CDK11A-220ENST00000492390 INSRP06213 1382 aa21.98■■□□□ 1.11
CDK11A-220ENST00000492390 PLEKHG2Q9H7P9 1386 aa21.98■■□□□ 1.11
CDK11A-220ENST00000492390 KIAA1551Q9HCM1 1747 aa21.97■■□□□ 1.11
CDK11A-220ENST00000492390 MAP2P11137 1827 aaKnown RBP21.97■■□□□ 1.11
CDK11A-220ENST00000492390 NLGN1Q8N2Q7 840 aa21.97■■□□□ 1.11
CDK11A-220ENST00000492390 FCHSD2O94868 740 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms