RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 TMEM88BA6NKF7 163 aa4.84□□□□□ -1.63
ATPAF1-206ENST00000492233 WDR43Q15061 677 aaKnown RBP eCLIP4.84□□□□□ -1.63
ATPAF1-206ENST00000492233 EXOC6Q8TAG9 804 aa4.84□□□□□ -1.63
ATPAF1-206ENST00000492233 REPIN1Q9BWE0 567 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-206ENST00000492233 PRM3Q9NNZ6 103 aa4.84□□□□□ -1.63
ATPAF1-206ENST00000492233 KLHL42Q9P2K6 505 aa4.84□□□□□ -1.63
ATPAF1-206ENST00000492233 ADAMTS8Q9UP79 889 aa4.84□□□□□ -1.63
ATPAF1-206ENST00000492233 KDM5AP29375 1690 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 ZFYVE9O95405 1425 aa4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 POLR3AO14802 1390 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 hCG_2014768A0A024R1R8 64 aa4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 SENP3-EIF4A1A0A087X0R7 540 aa4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 PRKAR2AP13861 404 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 DUSP27Q5VZP5 1158 aa4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 CHADLQ6NUI6 762 aa4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 TRMT2AQ8IZ69 625 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 TMTC2Q8N394 836 aa4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 CARD14Q9BXL6 1004 aa4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 MAGEC2Q9UBF1 373 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 SALL2Q9Y467 1007 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 KIF1BO60333 1816 aa4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 MROH2AA6NES4 1674 aa4.83□□□□□ -1.64
ATPAF1-206ENST00000492233 TLDC2A0PJX2 215 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 TCERG1O14776 1098 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 PRR29P0C7W0 189 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 IBSPP21815 317 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 FECHP22830 423 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 VAMP1P23763 118 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 ERCC5P28715 1186 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 LMOD1P29536 600 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 RFC5P40937 340 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 MARSP56192 900 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 GOLGA2Q08379 1002 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 PTPROQ16827 1216 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 TMEM259Q4ZIN3 620 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 GGT6Q6P531 493 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 SMC5Q8IY18 1101 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 LARGE2Q8N3Y3 721 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 SP7Q8TDD2 431 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 SGSM3Q96HU1 749 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 GPATCH3Q96I76 525 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 PPP1R12CQ9BZL4 782 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 LNPKQ9C0E8 428 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 UBA5Q9GZZ9 404 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 PIK3C2BO00750 1634 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 DIP2CQ9Y2E4 1556 aa4.82□□□□□ -1.64
ATPAF1-206ENST00000492233 SPDYE16A6NNV3 312 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 ATG7O95352 703 aa4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 MCCP23508 829 aa4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 NLRP6P59044 892 aa4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 SLFN5Q08AF3 891 aa4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 PDAP1Q13442 181 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 AAMPQ13685 434 aa4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 NOM1Q5C9Z4 860 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 RASEFQ8IZ41 740 aa4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 CRISPLD2Q9H0B8 497 aa4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 GLI2P10070 1586 aa4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 PPLO60437 1756 aa4.81□□□□□ -1.64
ATPAF1-206ENST00000492233 NSD3Q9BZ95 1437 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 NSD2O96028 1365 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 CAMSAP1Q5T5Y3 1602 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 HAX1O00165 279 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 DPYSL4O14531 572 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 RAPGEF3O95398 923 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 PARNO95453 639 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 SSTR3P32745 418 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 HIC1Q14526 733 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 HSP90AB2PQ58FF8 381 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 SDE2Q6IQ49 451 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 MTMR14Q8NCE2 650 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 CRBNQ96SW2 442 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 TANGO6Q9C0B7 1094 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 TBC1D2BQ9UPU7 963 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 TRAK1Q9UPV9 953 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 NEXMIFQ5QGS0 1516 aa4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 ZC3H13Q5T200 1668 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-206ENST00000492233 ANKRD36BQ8N2N9 1353 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 USP32Q8NFA0 1604 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 NINLQ9Y2I6 1382 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 CGNL1Q0VF96 1302 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 EVC2Q86UK5 1308 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 KDM2BQ8NHM5 1336 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 ANKRD33BA6NCL7 494 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 PALM3A6NDB9 673 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 APAF1O14727 1248 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 SH3BP5O60239 455 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 PLIN1O60240 522 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 IDI1Q13907 227 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 TSNAXIP1Q2TAA8 658 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 GRIPAP1Q4V328 841 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 RTL5Q5HYW3 569 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 EGFLAMQ63HQ2 1017 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 FBXO22Q8NEZ5 403 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 SPACA7Q96KW9 195 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 BEGAINQ9BUH8 593 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 SLC12A5Q9H2X9 1139 aa4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 NKTRP30414 1462 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-206ENST00000492233 YEATS2Q9ULM3 1422 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms