RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 QRICH2Q9H0J4 1663 aa17.1■□□□□ 0.33
CACNA1C-228ENST00000492150 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
CACNA1C-228ENST00000492150 SMC1BQ8NDV3 1235 aa17.1■□□□□ 0.33
CACNA1C-228ENST00000492150 PKD1L3Q7Z443 1732 aa17.1■□□□□ 0.33
CACNA1C-228ENST00000492150 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
CACNA1C-228ENST00000492150 KIF13BQ9NQT8 1826 aa17.07■□□□□ 0.32
CACNA1C-228ENST00000492150 KCNQ4P56696 695 aa17.07■□□□□ 0.32
CACNA1C-228ENST00000492150 NLRP6P59044 892 aa17.07■□□□□ 0.32
CACNA1C-228ENST00000492150 FLAD1Q8NFF5 587 aa17.07■□□□□ 0.32
CACNA1C-228ENST00000492150 KDM2BQ8NHM5 1336 aa17.06■□□□□ 0.32
CACNA1C-228ENST00000492150 MLLT1Q03111 559 aaPredicted RBP17.06■□□□□ 0.32
CACNA1C-228ENST00000492150 KIAA1551Q9HCM1 1747 aa17.06■□□□□ 0.32
CACNA1C-228ENST00000492150 C5P01031 1676 aa17.06■□□□□ 0.32
CACNA1C-228ENST00000492150 IL2RBP14784 551 aa17.05■□□□□ 0.32
CACNA1C-228ENST00000492150 RGS19P49795 217 aa17.05■□□□□ 0.32
CACNA1C-228ENST00000492150 HMGB2P26583 209 aaKnown RBP17.04■□□□□ 0.32
CACNA1C-228ENST00000492150 CCNL1Q9UK58 526 aaPredicted RBP17.04■□□□□ 0.32
CACNA1C-228ENST00000492150 DOT1LQ8TEK3 1739 aa17.04■□□□□ 0.32
CACNA1C-228ENST00000492150 TAF1LQ8IZX4 1826 aa17.03■□□□□ 0.32
CACNA1C-228ENST00000492150 KCPQ6ZWJ8 1503 aa17.03■□□□□ 0.32
CACNA1C-228ENST00000492150 KCNH5Q8NCM2 988 aa17.03■□□□□ 0.32
CACNA1C-228ENST00000492150 NSD2O96028 1365 aa17.02■□□□□ 0.32
CACNA1C-228ENST00000492150 ANKRD36BQ8N2N9 1353 aa17.02■□□□□ 0.32
CACNA1C-228ENST00000492150 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
CACNA1C-228ENST00000492150 NFAT5O94916 1531 aa17.01■□□□□ 0.31
CACNA1C-228ENST00000492150 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
CACNA1C-228ENST00000492150 FOXN1O15353 648 aa17■□□□□ 0.31
CACNA1C-228ENST00000492150 NBPF1Q3BBV0 1214 aa17■□□□□ 0.31
CACNA1C-228ENST00000492150 ABHD8Q96I13 439 aa17■□□□□ 0.31
CACNA1C-228ENST00000492150 N4BP2Q86UW6 1770 aaPredicted RBP16.99■□□□□ 0.31
CACNA1C-228ENST00000492150 ERBB3P21860 1342 aa16.98■□□□□ 0.31
CACNA1C-228ENST00000492150 TOGARAM1Q9Y4F4 1720 aa16.98■□□□□ 0.31
CACNA1C-228ENST00000492150 C9orf131Q5VYM1 1079 aa16.97■□□□□ 0.31
CACNA1C-228ENST00000492150 RRAGCQ9HB90 399 aa16.97■□□□□ 0.31
CACNA1C-228ENST00000492150 CABP2Q9NPB3 220 aa16.97■□□□□ 0.31
CACNA1C-228ENST00000492150 UBR3Q6ZT12 1888 aa16.97■□□□□ 0.31
CACNA1C-228ENST00000492150 CTCFP49711 727 aaPredicted RBP16.96■□□□□ 0.31
CACNA1C-228ENST00000492150 SRPK2P78362 688 aaKnown RBP16.96■□□□□ 0.31
CACNA1C-228ENST00000492150 ARHGAP27Q6ZUM4 889 aa16.96■□□□□ 0.31
CACNA1C-228ENST00000492150 PRIM1P49642 420 aaKnown RBP16.95■□□□□ 0.3
CACNA1C-228ENST00000492150 TGFB2P61812 414 aa16.95■□□□□ 0.3
CACNA1C-228ENST00000492150 BCS1LQ9Y276 419 aa16.95■□□□□ 0.3
CACNA1C-228ENST00000492150 C4BP0C0L5 1744 aa16.94■□□□□ 0.3
CACNA1C-228ENST00000492150 SYTL4Q96C24 671 aaPredicted RBP16.94■□□□□ 0.3
CACNA1C-228ENST00000492150 SBF1O95248 1867 aa16.94■□□□□ 0.3
CACNA1C-228ENST00000492150 NSD3Q9BZ95 1437 aa16.94■□□□□ 0.3
CACNA1C-228ENST00000492150 CENPJQ9HC77 1338 aaPredicted RBP16.94■□□□□ 0.3
CACNA1C-228ENST00000492150 USP47Q96K76 1375 aa16.93■□□□□ 0.3
CACNA1C-228ENST00000492150 NLRP2Q9NX02 1062 aa16.93■□□□□ 0.3
CACNA1C-228ENST00000492150 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
CACNA1C-228ENST00000492150 PDE4DIPQ5VU43 2346 aa16.93■□□□□ 0.3
CACNA1C-228ENST00000492150 CREBZFQ9NS37 354 aa16.91■□□□□ 0.3
CACNA1C-228ENST00000492150 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
CACNA1C-228ENST00000492150 AIDAQ96BJ3 306 aa16.9■□□□□ 0.3
CACNA1C-228ENST00000492150 FAM208AQ9UK61 1670 aaKnown RBP16.9■□□□□ 0.3
CACNA1C-228ENST00000492150 DDX54Q8TDD1 881 aaKnown RBP16.89■□□□□ 0.29
CACNA1C-228ENST00000492150 LTN1O94822 1766 aa16.88■□□□□ 0.29
CACNA1C-228ENST00000492150 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
CACNA1C-228ENST00000492150 RNF181Q9P0P0 153 aa16.87■□□□□ 0.29
CACNA1C-228ENST00000492150 FCHSD2O94868 740 aa16.86■□□□□ 0.29
CACNA1C-228ENST00000492150 VEGFAP15692 232 aaPredicted RBP16.86■□□□□ 0.29
CACNA1C-228ENST00000492150 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
CACNA1C-228ENST00000492150 CNTNAP1P78357 1384 aa16.86■□□□□ 0.29
CACNA1C-228ENST00000492150 SOX12O15370 315 aa16.85■□□□□ 0.29
CACNA1C-228ENST00000492150 SSFA2P28290 1259 aa16.85■□□□□ 0.29
CACNA1C-228ENST00000492150 LBX1P52954 281 aa16.85■□□□□ 0.29
CACNA1C-228ENST00000492150 AMIGO3Q86WK7 504 aa16.85■□□□□ 0.29
CACNA1C-228ENST00000492150 TTC21AQ8NDW8 1320 aa16.85■□□□□ 0.29
CACNA1C-228ENST00000492150 TNRC18O15417 2968 aaPredicted RBP16.85■□□□□ 0.29
CACNA1C-228ENST00000492150 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.84■□□□□ 0.29
CACNA1C-228ENST00000492150 A0A0G2JLW4 131 aa16.84■□□□□ 0.29
CACNA1C-228ENST00000492150 AK7Q96M32 723 aa16.84■□□□□ 0.29
CACNA1C-228ENST00000492150 WBP1LQ9NX94 342 aa16.84■□□□□ 0.29
CACNA1C-228ENST00000492150 TTC21BQ7Z4L5 1316 aa16.84■□□□□ 0.29
CACNA1C-228ENST00000492150 CCDC85CA6NKD9 419 aa16.83■□□□□ 0.28
CACNA1C-228ENST00000492150 EVC2Q86UK5 1308 aa16.82■□□□□ 0.28
CACNA1C-228ENST00000492150 ANKRD24Q8TF21 1146 aa16.82■□□□□ 0.28
CACNA1C-228ENST00000492150 DCAF5Q96JK2 942 aa16.82■□□□□ 0.28
CACNA1C-228ENST00000492150 KDM6AO15550 1401 aaPredicted RBP16.81■□□□□ 0.28
CACNA1C-228ENST00000492150 PALLDQ8WX93 1383 aa16.81■□□□□ 0.28
CACNA1C-228ENST00000492150 MMP10P09238 476 aa16.81■□□□□ 0.28
CACNA1C-228ENST00000492150 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
CACNA1C-228ENST00000492150 GLTPD2A6NH11 291 aa16.8■□□□□ 0.28
CACNA1C-228ENST00000492150 HSPA8P11142 646 aaKnown RBP16.8■□□□□ 0.28
CACNA1C-228ENST00000492150 DPEP1P16444 411 aa16.8■□□□□ 0.28
CACNA1C-228ENST00000492150 L3MBTL2Q969R5 705 aa16.8■□□□□ 0.28
CACNA1C-228ENST00000492150 PHF14O94880 888 aa16.79■□□□□ 0.28
CACNA1C-228ENST00000492150 C4AP0C0L4 1744 aa16.79■□□□□ 0.28
CACNA1C-228ENST00000492150 KCNA3P22001 575 aa16.78■□□□□ 0.28
CACNA1C-228ENST00000492150 SMIM5Q71RC9 77 aa16.77■□□□□ 0.28
CACNA1C-228ENST00000492150 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.27
CACNA1C-228ENST00000492150 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
CACNA1C-228ENST00000492150 TIAM2Q8IVF5 1701 aa16.76■□□□□ 0.27
CACNA1C-228ENST00000492150 ZCRB1Q8TBF4 217 aaKnown RBP16.76■□□□□ 0.27
CACNA1C-228ENST00000492150 CCDC87Q9NVE4 849 aa16.76■□□□□ 0.27
CACNA1C-228ENST00000492150 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
CACNA1C-228ENST00000492150 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
CACNA1C-228ENST00000492150 MON2Q7Z3U7 1717 aa16.73■□□□□ 0.27
CACNA1C-228ENST00000492150 VEGFBP49765 207 aa16.73■□□□□ 0.27
CACNA1C-228ENST00000492150 DALRD3Q5D0E6 543 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms