RNA–Protein interactions for RNA: ENST00000492121.1

TPM3P9-202, Transcript of tropomyosin 3 pseudogene 9, humanhuman

BASIC

Gene TPM3P9, Length 745 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-202ENST00000492121 SBF2Q86WG5 1849 aa13.59□□□□□ -0.23
TPM3P9-202ENST00000492121 PDGFDQ9GZP0 370 aaPredicted RBP13.58□□□□□ -0.24
TPM3P9-202ENST00000492121 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
TPM3P9-202ENST00000492121 SMG6Q86US8 1419 aaKnown RBP13.57□□□□□ -0.24
TPM3P9-202ENST00000492121 NHSQ6T4R5 1651 aa13.57□□□□□ -0.24
TPM3P9-202ENST00000492121 ZBTB7AO95365 584 aa13.57□□□□□ -0.24
TPM3P9-202ENST00000492121 KIF24Q5T7B8 1368 aa13.57□□□□□ -0.24
TPM3P9-202ENST00000492121 NBPF6Q5VWK0 638 aa13.56□□□□□ -0.24
TPM3P9-202ENST00000492121 ZCRB1Q8TBF4 217 aaKnown RBP13.56□□□□□ -0.24
TPM3P9-202ENST00000492121 NBPF4Q96M43 638 aa13.56□□□□□ -0.24
TPM3P9-202ENST00000492121 PCGF6Q9BYE7 350 aa13.56□□□□□ -0.24
TPM3P9-202ENST00000492121 CGNL1Q0VF96 1302 aa13.56□□□□□ -0.24
TPM3P9-202ENST00000492121 SLC27A3Q5K4L6 730 aa13.55□□□□□ -0.24
TPM3P9-202ENST00000492121 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
TPM3P9-202ENST00000492121 MTFR1LQ9H019 292 aa13.55□□□□□ -0.24
TPM3P9-202ENST00000492121 FAM208AQ9UK61 1670 aaKnown RBP13.55□□□□□ -0.24
TPM3P9-202ENST00000492121 INSRP06213 1382 aa13.55□□□□□ -0.24
TPM3P9-202ENST00000492121 FLT4P35916 1363 aa13.55□□□□□ -0.24
TPM3P9-202ENST00000492121 MEGF6O75095 1541 aa13.54□□□□□ -0.24
TPM3P9-202ENST00000492121 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
TPM3P9-202ENST00000492121 PTGER2P43116 358 aa13.54□□□□□ -0.24
TPM3P9-202ENST00000492121 PRIM1P49642 420 aaKnown RBP13.54□□□□□ -0.24
TPM3P9-202ENST00000492121 HSP90AB2PQ58FF8 381 aa13.54□□□□□ -0.24
TPM3P9-202ENST00000492121 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
TPM3P9-202ENST00000492121 SYTL4Q96C24 671 aaPredicted RBP13.54□□□□□ -0.24
TPM3P9-202ENST00000492121 ATF5Q9Y2D1 282 aaPredicted RBP13.54□□□□□ -0.24
TPM3P9-202ENST00000492121 NSD3Q9BZ95 1437 aa13.54□□□□□ -0.24
TPM3P9-202ENST00000492121 CASZ1Q86V15 1759 aa13.53□□□□□ -0.24
TPM3P9-202ENST00000492121 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
TPM3P9-202ENST00000492121 TATP17735 454 aaPredicted RBP13.52□□□□□ -0.25
TPM3P9-202ENST00000492121 ZNF827Q17R98 1081 aa13.52□□□□□ -0.25
TPM3P9-202ENST00000492121 USHBP1Q8N6Y0 703 aa13.52□□□□□ -0.25
TPM3P9-202ENST00000492121 PAPPAQ13219 1627 aa13.51□□□□□ -0.25
TPM3P9-202ENST00000492121 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
TPM3P9-202ENST00000492121 SGIP1Q9BQI5 828 aa13.51□□□□□ -0.25
TPM3P9-202ENST00000492121 NSD2O96028 1365 aa13.5□□□□□ -0.25
TPM3P9-202ENST00000492121 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
TPM3P9-202ENST00000492121 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
TPM3P9-202ENST00000492121 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
TPM3P9-202ENST00000492121 YY1P25490 414 aa13.49□□□□□ -0.25
TPM3P9-202ENST00000492121 SLC16A10Q8TF71 515 aa13.49□□□□□ -0.25
TPM3P9-202ENST00000492121 PPM1GO15355 546 aaPredicted RBP13.48□□□□□ -0.25
TPM3P9-202ENST00000492121 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
TPM3P9-202ENST00000492121 ARXQ96QS3 562 aa13.48□□□□□ -0.25
TPM3P9-202ENST00000492121 SYT17Q9BSW7 474 aa13.48□□□□□ -0.25
TPM3P9-202ENST00000492121 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
TPM3P9-202ENST00000492121 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
TPM3P9-202ENST00000492121 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
TPM3P9-202ENST00000492121 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
TPM3P9-202ENST00000492121 POLR3GLQ9BT43 218 aa13.47□□□□□ -0.25
TPM3P9-202ENST00000492121 CCNL1Q9UK58 526 aaPredicted RBP13.47□□□□□ -0.25
TPM3P9-202ENST00000492121 BTAF1O14981 1849 aa13.47□□□□□ -0.25
TPM3P9-202ENST00000492121 KCNQ4P56696 695 aa13.46□□□□□ -0.25
TPM3P9-202ENST00000492121 MYOM1P52179 1685 aa13.46□□□□□ -0.26
TPM3P9-202ENST00000492121 NCAPD2Q15021 1401 aa13.46□□□□□ -0.26
TPM3P9-202ENST00000492121 PNPLA7Q6ZV29 1317 aa13.45□□□□□ -0.26
TPM3P9-202ENST00000492121 CYP27B1O15528 508 aa13.45□□□□□ -0.26
TPM3P9-202ENST00000492121 CCER1Q8TC90 406 aaPredicted RBP13.45□□□□□ -0.26
TPM3P9-202ENST00000492121 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
TPM3P9-202ENST00000492121 POLKQ9UBT6 870 aa13.45□□□□□ -0.26
TPM3P9-202ENST00000492121 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
TPM3P9-202ENST00000492121 KIF20BQ96Q89 1820 aa13.44□□□□□ -0.26
TPM3P9-202ENST00000492121 HSPA5P11021 654 aaKnown RBP13.44□□□□□ -0.26
TPM3P9-202ENST00000492121 POLD1P28340 1107 aa13.44□□□□□ -0.26
TPM3P9-202ENST00000492121 SPG7Q9UQ90 795 aa13.44□□□□□ -0.26
TPM3P9-202ENST00000492121 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
TPM3P9-202ENST00000492121 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
TPM3P9-202ENST00000492121 DOT1LQ8TEK3 1739 aa13.43□□□□□ -0.26
TPM3P9-202ENST00000492121 EYA1Q99502 592 aa13.43□□□□□ -0.26
TPM3P9-202ENST00000492121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.43□□□□□ -0.264e-7■■■□□ 17.4
TPM3P9-202ENST00000492121 PALLDQ8WX93 1383 aa13.43□□□□□ -0.26
TPM3P9-202ENST00000492121 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
TPM3P9-202ENST00000492121 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
TPM3P9-202ENST00000492121 PANK3Q9H999 370 aa13.42□□□□□ -0.26
TPM3P9-202ENST00000492121 TNNT2P45379 298 aaPredicted RBP13.41□□□□□ -0.26
TPM3P9-202ENST00000492121 EIF4A2Q14240 407 aaKnown RBP13.4□□□□□ -0.26
TPM3P9-202ENST00000492121 PLEKHG2Q9H7P9 1386 aa13.4□□□□□ -0.26
TPM3P9-202ENST00000492121 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
TPM3P9-202ENST00000492121 COL23A1Q86Y22 540 aaPredicted RBP13.39□□□□□ -0.27
TPM3P9-202ENST00000492121 IFNL2Q8IZJ0 200 aa13.39□□□□□ -0.27
TPM3P9-202ENST00000492121 FLAD1Q8NFF5 587 aa13.39□□□□□ -0.27
TPM3P9-202ENST00000492121 PIGBQ92521 554 aa13.39□□□□□ -0.27
TPM3P9-202ENST00000492121 LY75O60449 1722 aa13.39□□□□□ -0.27
TPM3P9-202ENST00000492121 KLHL34Q8N239 644 aa13.38□□□□□ -0.27
TPM3P9-202ENST00000492121 ANKRD26Q9UPS8 1709 aa13.38□□□□□ -0.27
TPM3P9-202ENST00000492121 PHKG2P15735 406 aa13.37□□□□□ -0.27
TPM3P9-202ENST00000492121 TMOD3Q9NYL9 352 aa13.37□□□□□ -0.27
TPM3P9-202ENST00000492121 IGSF1Q8N6C5 1336 aa13.37□□□□□ -0.27
TPM3P9-202ENST00000492121 GPR162Q16538 588 aa13.36□□□□□ -0.27
TPM3P9-202ENST00000492121 MORC1Q86VD1 984 aa13.36□□□□□ -0.27
TPM3P9-202ENST00000492121 AK7Q96M32 723 aa13.36□□□□□ -0.27
TPM3P9-202ENST00000492121 QSER1Q2KHR3 1735 aa13.36□□□□□ -0.27
TPM3P9-202ENST00000492121 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
TPM3P9-202ENST00000492121 LOC102724428A0A0B4J2F2 783 aa13.35□□□□□ -0.27
TPM3P9-202ENST00000492121 SIK1P57059 783 aa13.35□□□□□ -0.27
TPM3P9-202ENST00000492121 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
TPM3P9-202ENST00000492121 HSP90AB1P08238 724 aaKnown RBP13.33□□□□□ -0.28
TPM3P9-202ENST00000492121 POLA2Q14181 598 aa13.33□□□□□ -0.28
TPM3P9-202ENST00000492121 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.28
TPM3P9-202ENST00000492121 PLEKHO1Q53GL0 409 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms