RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 PROM2Q8N271 834 aa37.21■■■■□ 3.55
SH3GL3-204ENST00000492099 KIF7Q2M1P5 1343 aa37.2■■■■□ 3.55
SH3GL3-204ENST00000492099 TATP17735 454 aaPredicted RBP37.2■■■■□ 3.55
SH3GL3-204ENST00000492099 ANKRD26Q9UPS8 1709 aa37.19■■■■□ 3.54
SH3GL3-204ENST00000492099 TNNT2P45379 298 aaPredicted RBP37.19■■■■□ 3.54
SH3GL3-204ENST00000492099 LRP5O75197 1615 aa37.18■■■■□ 3.54
SH3GL3-204ENST00000492099 TXNRD1Q16881 649 aa37.18■■■■□ 3.54
SH3GL3-204ENST00000492099 KNSTRNQ9Y448 316 aa37.18■■■■□ 3.54
SH3GL3-204ENST00000492099 MAP2P11137 1827 aaKnown RBP37.17■■■■□ 3.54
SH3GL3-204ENST00000492099 MORC1Q86VD1 984 aa37.12■■■■□ 3.53
SH3GL3-204ENST00000492099 KAT6BQ8WYB5 2073 aa37.11■■■■□ 3.53
SH3GL3-204ENST00000492099 ANO8Q9HCE9 1232 aaPredicted RBP37.09■■■■□ 3.53
SH3GL3-204ENST00000492099 NCAPD2Q15021 1401 aa37.09■■■■□ 3.53
SH3GL3-204ENST00000492099 SHANK3Q9BYB0 1731 aa37.08■■■■□ 3.53
SH3GL3-204ENST00000492099 PRIM1P49642 420 aaKnown RBP37.08■■■■□ 3.53
SH3GL3-204ENST00000492099 EYA1Q99502 592 aa37.08■■■■□ 3.53
SH3GL3-204ENST00000492099 PCDH11XQ9BZA7 1347 aa37.08■■■■□ 3.53
SH3GL3-204ENST00000492099 PCDH11YQ9BZA8 1340 aa37.08■■■■□ 3.53
SH3GL3-204ENST00000492099 SYTL4Q96C24 671 aaPredicted RBP37.07■■■■□ 3.52
SH3GL3-204ENST00000492099 BTAF1O14981 1849 aa37.07■■■■□ 3.52
SH3GL3-204ENST00000492099 EIF4A2Q14240 407 aaKnown RBP37.05■■■■□ 3.52
SH3GL3-204ENST00000492099 STK32BQ9NY57 414 aa37.05■■■■□ 3.52
SH3GL3-204ENST00000492099 AMER1Q5JTC6 1135 aaPredicted RBP37.03■■■■□ 3.52
SH3GL3-204ENST00000492099 SLC15A2Q16348 729 aa37■■■■□ 3.51
SH3GL3-204ENST00000492099 SPG7Q9UQ90 795 aa37■■■■□ 3.51
SH3GL3-204ENST00000492099 DOT1LQ8TEK3 1739 aa36.99■■■■□ 3.51
SH3GL3-204ENST00000492099 CYP27B1O15528 508 aa36.98■■■■□ 3.51
SH3GL3-204ENST00000492099 SLC27A3Q5K4L6 730 aa36.98■■■■□ 3.51
SH3GL3-204ENST00000492099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.98■■■■□ 3.51
SH3GL3-204ENST00000492099 PER1O15534 1290 aaPredicted RBP36.97■■■■□ 3.51
SH3GL3-204ENST00000492099 SPON1Q9HCB6 807 aa36.96■■■■□ 3.51
SH3GL3-204ENST00000492099 LRRC4BQ9NT99 713 aa36.94■■■■□ 3.5
SH3GL3-204ENST00000492099 PKD1L3Q7Z443 1732 aa36.93■■■■□ 3.5
SH3GL3-204ENST00000492099 IGSF1Q8N6C5 1336 aa36.93■■■■□ 3.5
SH3GL3-204ENST00000492099 PLEKHG2Q9H7P9 1386 aa36.91■■■■□ 3.5
SH3GL3-204ENST00000492099 NKX1-1Q15270 411 aaPredicted RBP36.9■■■■□ 3.5
SH3GL3-204ENST00000492099 PAPPAQ13219 1627 aa36.88■■■■□ 3.49
SH3GL3-204ENST00000492099 PDGFDQ9GZP0 370 aaPredicted RBP36.87■■■■□ 3.49
SH3GL3-204ENST00000492099 CASZ1Q86V15 1759 aa36.86■■■■□ 3.49
SH3GL3-204ENST00000492099 MPRIPQ6WCQ1 1025 aa36.85■■■■□ 3.49
SH3GL3-204ENST00000492099 IFNL2Q8IZJ0 200 aa36.85■■■■□ 3.49
SH3GL3-204ENST00000492099 CC2D1BQ5T0F9 858 aaKnown RBP36.84■■■■□ 3.49
SH3GL3-204ENST00000492099 NPC1L1Q9UHC9 1359 aa36.83■■■■□ 3.49
SH3GL3-204ENST00000492099 CCNL1Q9UK58 526 aaPredicted RBP36.83■■■■□ 3.49
SH3GL3-204ENST00000492099 PHKG2P15735 406 aa36.82■■■■□ 3.48
SH3GL3-204ENST00000492099 ZNF827Q17R98 1081 aa36.82■■■■□ 3.48
SH3GL3-204ENST00000492099 AKT1S1Q96B36 256 aa36.82■■■■□ 3.48
SH3GL3-204ENST00000492099 PPP1R1BQ9UD71 204 aaPredicted RBP36.82■■■■□ 3.48
SH3GL3-204ENST00000492099 ZBTB7AO95365 584 aa36.81■■■■□ 3.48
SH3GL3-204ENST00000492099 MTHFSP49914 203 aa36.81■■■■□ 3.48
SH3GL3-204ENST00000492099 LY75O60449 1722 aa36.81■■■■□ 3.48
SH3GL3-204ENST00000492099 IL13P35225 146 aa36.8■■■■□ 3.48
SH3GL3-204ENST00000492099 HMGB2P26583 209 aaKnown RBP36.79■■■■□ 3.48
SH3GL3-204ENST00000492099 KCNQ4P56696 695 aa36.79■■■■□ 3.48
SH3GL3-204ENST00000492099 PLEKHO1Q53GL0 409 aaPredicted RBP36.79■■■■□ 3.48
SH3GL3-204ENST00000492099 AMOTQ4VCS5 1084 aa36.77■■■■□ 3.48
SH3GL3-204ENST00000492099 SMARCC1Q92922 1105 aaPredicted RBP36.77■■■■□ 3.48
SH3GL3-204ENST00000492099 MTFR1LQ9H019 292 aa36.77■■■■□ 3.48
SH3GL3-204ENST00000492099 PIGBQ92521 554 aa36.76■■■■□ 3.48
SH3GL3-204ENST00000492099 SULT6B1Q6IMI4 303 aa36.75■■■■□ 3.47
SH3GL3-204ENST00000492099 TOGARAM1Q9Y4F4 1720 aa36.75■■■■□ 3.47
SH3GL3-204ENST00000492099 PALLDQ8WX93 1383 aa36.75■■■■□ 3.47
SH3GL3-204ENST00000492099 AEBP1Q8IUX7 1158 aa36.74■■■■□ 3.47
SH3GL3-204ENST00000492099 TFCP2L1Q9NZI6 479 aa36.74■■■■□ 3.47
SH3GL3-204ENST00000492099 ATF5Q9Y2D1 282 aaPredicted RBP36.74■■■■□ 3.47
SH3GL3-204ENST00000492099 HSP90AB1P08238 724 aaKnown RBP36.73■■■■□ 3.47
SH3GL3-204ENST00000492099 TMOD3Q9NYL9 352 aa36.73■■■■□ 3.47
SH3GL3-204ENST00000492099 ITGB4P16144 1822 aa36.71■■■■□ 3.47
SH3GL3-204ENST00000492099 KDRP35968 1356 aa36.71■■■■□ 3.47
SH3GL3-204ENST00000492099 PTGER2P43116 358 aa36.7■■■■□ 3.47
SH3GL3-204ENST00000492099 ZNF530Q6P9A1 599 aaPredicted RBP36.69■■■■□ 3.46
SH3GL3-204ENST00000492099 CNGB1Q14028 1251 aaPredicted RBP36.68■■■■□ 3.46
SH3GL3-204ENST00000492099 SLC16A10Q8TF71 515 aa36.68■■■■□ 3.46
SH3GL3-204ENST00000492099 DCAF5Q96JK2 942 aa36.68■■■■□ 3.46
SH3GL3-204ENST00000492099 PNPLA7Q6ZV29 1317 aa36.66■■■■□ 3.46
SH3GL3-204ENST00000492099 ERVV-2B6SEH9 535 aa36.66■■■■□ 3.46
SH3GL3-204ENST00000492099 DIAPH1O60610 1272 aaKnown RBP36.66■■■■□ 3.46
SH3GL3-204ENST00000492099 QSER1Q2KHR3 1735 aa36.65■■■■□ 3.46
SH3GL3-204ENST00000492099 C1orf141Q5JVX7 400 aa36.64■■■■□ 3.46
SH3GL3-204ENST00000492099 SGIP1Q9BQI5 828 aa36.63■■■■□ 3.45
SH3GL3-204ENST00000492099 ASAP1Q9ULH1 1129 aa36.61■■■■□ 3.45
SH3GL3-204ENST00000492099 LOC102724428A0A0B4J2F2 783 aa36.59■■■■□ 3.45
SH3GL3-204ENST00000492099 SIK1P57059 783 aa36.59■■■■□ 3.45
SH3GL3-204ENST00000492099 C5P01031 1676 aa36.58■■■■□ 3.45
SH3GL3-204ENST00000492099 HMOX1P09601 288 aa36.57■■■■□ 3.44
SH3GL3-204ENST00000492099 ATG3Q9NT62 314 aa36.57■■■■□ 3.44
SH3GL3-204ENST00000492099 KDM6AO15550 1401 aaPredicted RBP36.56■■■■□ 3.44
SH3GL3-204ENST00000492099 CABP4P57796 275 aa36.55■■■■□ 3.44
SH3GL3-204ENST00000492099 FLAD1Q8NFF5 587 aa36.55■■■■□ 3.44
SH3GL3-204ENST00000492099 ARXQ96QS3 562 aa36.55■■■■□ 3.44
SH3GL3-204ENST00000492099 TUBGCP6Q96RT7 1819 aa36.55■■■■□ 3.44
SH3GL3-204ENST00000492099 MSH5O43196 834 aa36.53■■■■□ 3.44
SH3GL3-204ENST00000492099 AKAP4Q5JQC9 854 aa36.53■■■■□ 3.44
SH3GL3-204ENST00000492099 COL23A1Q86Y22 540 aaPredicted RBP36.53■■■■□ 3.44
SH3GL3-204ENST00000492099 TAF1LQ8IZX4 1826 aa36.52■■■■□ 3.44
SH3GL3-204ENST00000492099 POLD1P28340 1107 aa36.52■■■■□ 3.44
SH3GL3-204ENST00000492099 AK7Q96M32 723 aa36.52■■■■□ 3.44
SH3GL3-204ENST00000492099 COL3A1P02461 1466 aaPredicted RBP36.51■■■■□ 3.44
SH3GL3-204ENST00000492099 ATP6V1AP38606 617 aa36.5■■■■□ 3.43
SH3GL3-204ENST00000492099 CFAP53Q96M91 514 aa36.5■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms