RNA–Protein interactions for RNA: ENST00000491990.5

NUP188-209, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 381 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-209ENST00000491990 EIF4G2P78344 907 aaKnown RBP eCLIP32.01■■■□□ 2.711e-6■■■■■ 44.4
NUP188-209ENST00000491990 SHANK3Q9BYB0 1731 aa32■■■□□ 2.71
NUP188-209ENST00000491990 USHBP1Q8N6Y0 703 aa31.99■■■□□ 2.71
NUP188-209ENST00000491990 RAPGEF4Q8WZA2 1011 aa31.99■■■□□ 2.71
NUP188-209ENST00000491990 POLR3GLQ9BT43 218 aa31.99■■■□□ 2.71
NUP188-209ENST00000491990 PDGFDQ9GZP0 370 aaPredicted RBP31.97■■■□□ 2.71
NUP188-209ENST00000491990 DOT1LQ8TEK3 1739 aa31.96■■■□□ 2.71
NUP188-209ENST00000491990 HSPA5P11021 654 aaKnown RBP31.95■■■□□ 2.71
NUP188-209ENST00000491990 TATP17735 454 aaPredicted RBP31.95■■■□□ 2.71
NUP188-209ENST00000491990 SYTL4Q96C24 671 aaPredicted RBP31.95■■■□□ 2.71
NUP188-209ENST00000491990 EMILIN1Q9Y6C2 1016 aa31.95■■■□□ 2.71
NUP188-209ENST00000491990 PAPPAQ13219 1627 aa31.95■■■□□ 2.71
NUP188-209ENST00000491990 ZBTB7AO95365 584 aa31.94■■■□□ 2.7
NUP188-209ENST00000491990 PRIM1P49642 420 aaKnown RBP31.94■■■□□ 2.7
NUP188-209ENST00000491990 ANKRD26Q9UPS8 1709 aa31.92■■■□□ 2.7
NUP188-209ENST00000491990 SLC27A3Q5K4L6 730 aa31.91■■■□□ 2.7
NUP188-209ENST00000491990 LRRC4BQ9NT99 713 aa31.91■■■□□ 2.7
NUP188-209ENST00000491990 MAP2P11137 1827 aaKnown RBP31.91■■■□□ 2.7
NUP188-209ENST00000491990 PPM1GO15355 546 aaPredicted RBP31.9■■■□□ 2.7
NUP188-209ENST00000491990 ATF5Q9Y2D1 282 aaPredicted RBP31.88■■■□□ 2.69
NUP188-209ENST00000491990 NSD2O96028 1365 aa31.87■■■□□ 2.69
NUP188-209ENST00000491990 PCDH11XQ9BZA7 1347 aa31.87■■■□□ 2.69
NUP188-209ENST00000491990 PCDH11YQ9BZA8 1340 aa31.87■■■□□ 2.69
NUP188-209ENST00000491990 MTFR1LQ9H019 292 aa31.87■■■□□ 2.69
NUP188-209ENST00000491990 WASHC2AQ641Q2 1341 aa31.86■■■□□ 2.69
NUP188-209ENST00000491990 PTGER2P43116 358 aa31.85■■■□□ 2.69
NUP188-209ENST00000491990 ZNF827Q17R98 1081 aa31.85■■■□□ 2.69
NUP188-209ENST00000491990 LY75O60449 1722 aa31.84■■■□□ 2.69
NUP188-209ENST00000491990 NCAPD2Q15021 1401 aa31.83■■■□□ 2.69
NUP188-209ENST00000491990 AKT1S1Q96B36 256 aa31.82■■■□□ 2.68
NUP188-209ENST00000491990 POLKQ9UBT6 870 aa31.82■■■□□ 2.68
NUP188-209ENST00000491990 DCAF8L1A6NGE4 600 aa31.81■■■□□ 2.68
NUP188-209ENST00000491990 PANK3Q9H999 370 aa31.81■■■□□ 2.68
NUP188-209ENST00000491990 QSER1Q2KHR3 1735 aa31.8■■■□□ 2.68
NUP188-209ENST00000491990 PKD1L3Q7Z443 1732 aa31.8■■■□□ 2.68
NUP188-209ENST00000491990 TNNT2P45379 298 aaPredicted RBP31.78■■■□□ 2.68
NUP188-209ENST00000491990 CYP27B1O15528 508 aa31.77■■■□□ 2.68
NUP188-209ENST00000491990 EYA1Q99502 592 aa31.77■■■□□ 2.68
NUP188-209ENST00000491990 CCNL1Q9UK58 526 aaPredicted RBP31.77■■■□□ 2.68
NUP188-209ENST00000491990 KCNQ4P56696 695 aa31.76■■■□□ 2.67
NUP188-209ENST00000491990 SGIP1Q9BQI5 828 aa31.76■■■□□ 2.67
NUP188-209ENST00000491990 SPG7Q9UQ90 795 aa31.75■■■□□ 2.67
NUP188-209ENST00000491990 SLC16A10Q8TF71 515 aa31.74■■■□□ 2.67
NUP188-209ENST00000491990 TFCP2L1Q9NZI6 479 aa31.74■■■□□ 2.67
NUP188-209ENST00000491990 PNPLA7Q6ZV29 1317 aa31.72■■■□□ 2.67
NUP188-209ENST00000491990 TUBGCP6Q96RT7 1819 aa31.71■■■□□ 2.67
NUP188-209ENST00000491990 EIF4A2Q14240 407 aaKnown RBP31.71■■■□□ 2.67
NUP188-209ENST00000491990 MPRIPQ6WCQ1 1025 aa31.71■■■□□ 2.67
NUP188-209ENST00000491990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.71■■■□□ 2.678e-7■■□□□ 14.1
NUP188-209ENST00000491990 ARXQ96QS3 562 aa31.7■■■□□ 2.67
NUP188-209ENST00000491990 FHDC1Q9C0D6 1143 aaPredicted RBP31.7■■■□□ 2.67
NUP188-209ENST00000491990 ITGB4P16144 1822 aa31.7■■■□□ 2.66
NUP188-209ENST00000491990 TOGARAM1Q9Y4F4 1720 aa31.69■■■□□ 2.66
NUP188-209ENST00000491990 HMGB2P26583 209 aaKnown RBP31.69■■■□□ 2.66
NUP188-209ENST00000491990 NKX1-1Q15270 411 aaPredicted RBP31.69■■■□□ 2.66
NUP188-209ENST00000491990 SYT17Q9BSW7 474 aa31.68■■■□□ 2.66
NUP188-209ENST00000491990 PALLDQ8WX93 1383 aa31.67■■■□□ 2.66
NUP188-209ENST00000491990 MORC1Q86VD1 984 aa31.66■■■□□ 2.66
NUP188-209ENST00000491990 KNSTRNQ9Y448 316 aa31.66■■■□□ 2.66
NUP188-209ENST00000491990 SMARCC1Q92922 1105 aaPredicted RBP31.65■■■□□ 2.66
NUP188-209ENST00000491990 PLEKHG2Q9H7P9 1386 aa31.65■■■□□ 2.66
NUP188-209ENST00000491990 C5P01031 1676 aa31.64■■■□□ 2.66
NUP188-209ENST00000491990 POLD1P28340 1107 aa31.63■■■□□ 2.65
NUP188-209ENST00000491990 IFNL2Q8IZJ0 200 aa31.63■■■□□ 2.65
NUP188-209ENST00000491990 YY1P25490 414 aa31.62■■■□□ 2.65
NUP188-209ENST00000491990 COL24A1Q17RW2 1714 aa31.62■■■□□ 2.65
NUP188-209ENST00000491990 IGSF1Q8N6C5 1336 aa31.62■■■□□ 2.65
NUP188-209ENST00000491990 MAP3K5Q99683 1374 aa31.61■■■□□ 2.65
NUP188-209ENST00000491990 PIGBQ92521 554 aa31.61■■■□□ 2.65
NUP188-209ENST00000491990 TAF1LQ8IZX4 1826 aa31.61■■■□□ 2.65
NUP188-209ENST00000491990 PHKG2P15735 406 aa31.6■■■□□ 2.65
NUP188-209ENST00000491990 KIF7Q2M1P5 1343 aa31.59■■■□□ 2.65
NUP188-209ENST00000491990 MSH5O43196 834 aa31.58■■■□□ 2.65
NUP188-209ENST00000491990 TMOD3Q9NYL9 352 aa31.57■■■□□ 2.64
NUP188-209ENST00000491990 COL23A1Q86Y22 540 aaPredicted RBP31.56■■■□□ 2.64
NUP188-209ENST00000491990 FLAD1Q8NFF5 587 aa31.54■■■□□ 2.64
NUP188-209ENST00000491990 AMER1Q5JTC6 1135 aaPredicted RBP31.53■■■□□ 2.64
NUP188-209ENST00000491990 C4BP0C0L5 1744 aa31.52■■■□□ 2.64
NUP188-209ENST00000491990 PLEKHO1Q53GL0 409 aaPredicted RBP31.52■■■□□ 2.64
NUP188-209ENST00000491990 KLHL34Q8N239 644 aa31.51■■■□□ 2.63
NUP188-209ENST00000491990 HSP90AB1P08238 724 aaKnown RBP31.5■■■□□ 2.63
NUP188-209ENST00000491990 AK7Q96M32 723 aa31.5■■■□□ 2.63
NUP188-209ENST00000491990 LOC102724428A0A0B4J2F2 783 aa31.49■■■□□ 2.63
NUP188-209ENST00000491990 SIK1P57059 783 aa31.49■■■□□ 2.63
NUP188-209ENST00000491990 AMOTQ4VCS5 1084 aa31.49■■■□□ 2.63
NUP188-209ENST00000491990 ASAP1Q9ULH1 1129 aa31.48■■■□□ 2.63
NUP188-209ENST00000491990 DCAF5Q96JK2 942 aa31.47■■■□□ 2.63
NUP188-209ENST00000491990 ERVV-2B6SEH9 535 aa31.46■■■□□ 2.63
NUP188-209ENST00000491990 ZNF530Q6P9A1 599 aaPredicted RBP31.46■■■□□ 2.63
NUP188-209ENST00000491990 AEBP1Q8IUX7 1158 aa31.45■■■□□ 2.63
NUP188-209ENST00000491990 UBR3Q6ZT12 1888 aa31.44■■■□□ 2.62
NUP188-209ENST00000491990 MSL1Q68DK7 614 aa31.44■■■□□ 2.62
NUP188-209ENST00000491990 ATG3Q9NT62 314 aa31.44■■■□□ 2.62
NUP188-209ENST00000491990 UTRNP46939 3433 aa31.43■■■□□ 2.62
NUP188-209ENST00000491990 IL13P35225 146 aa31.43■■■□□ 2.62
NUP188-209ENST00000491990 SULT6B1Q6IMI4 303 aa31.43■■■□□ 2.62
NUP188-209ENST00000491990 PER1O15534 1290 aaPredicted RBP31.42■■■□□ 2.62
NUP188-209ENST00000491990 ATP6V1AP38606 617 aa31.42■■■□□ 2.62
NUP188-209ENST00000491990 LINC00116Q8NCU8 138 aa31.42■■■□□ 2.62
NUP188-209ENST00000491990 KDRP35968 1356 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms