RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
SNED1-211ENST00000491761 SLC26A8Q96RN1 970 aa13.2□□□□□ -0.3
SNED1-211ENST00000491761 ANTXR1Q9H6X2 564 aa13.2□□□□□ -0.3
SNED1-211ENST00000491761 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
SNED1-211ENST00000491761 CDK12Q9NYV4 1490 aaPredicted RBP13.2□□□□□ -0.3
SNED1-211ENST00000491761 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
SNED1-211ENST00000491761 RBM25P49756 843 aaKnown RBP13.2□□□□□ -0.3
SNED1-211ENST00000491761 INTS3Q68E01 1043 aaKnown RBP13.2□□□□□ -0.3
SNED1-211ENST00000491761 TBC1D9Q6ZT07 1266 aa13.2□□□□□ -0.3
SNED1-211ENST00000491761 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
SNED1-211ENST00000491761 ABCC4O15439 1325 aa13.2□□□□□ -0.3
SNED1-211ENST00000491761 KIAA2012Q0VF49 1180 aa13.2□□□□□ -0.3
SNED1-211ENST00000491761 SNX21Q969T3 373 aa13.19□□□□□ -0.3
SNED1-211ENST00000491761 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
SNED1-211ENST00000491761 SKOR2Q2VWA4 1001 aaPredicted RBP13.18□□□□□ -0.3
SNED1-211ENST00000491761 HSP90AB2PQ58FF8 381 aa13.18□□□□□ -0.3
SNED1-211ENST00000491761 CPSF1Q10570 1443 aaKnown RBP13.18□□□□□ -0.3
SNED1-211ENST00000491761 K7ELQ4 463 aaPredicted RBP13.18□□□□□ -0.3
SNED1-211ENST00000491761 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
SNED1-211ENST00000491761 AGLP35573 1532 aa13.17□□□□□ -0.3
SNED1-211ENST00000491761 MYO5BQ9ULV0 1848 aa13.17□□□□□ -0.3
SNED1-211ENST00000491761 PTPRCP08575 1304 aa13.17□□□□□ -0.3
SNED1-211ENST00000491761 TRIM6-TRIM34B2RNG4 842 aa13.17□□□□□ -0.3
SNED1-211ENST00000491761 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
SNED1-211ENST00000491761 REC8O95072 547 aa13.16□□□□□ -0.3
SNED1-211ENST00000491761 DCTPP1Q9H773 170 aa13.16□□□□□ -0.3
SNED1-211ENST00000491761 ST18O60284 1047 aa13.16□□□□□ -0.3
SNED1-211ENST00000491761 RABEP1Q15276 862 aa13.16□□□□□ -0.3
SNED1-211ENST00000491761 TMEM2Q9UHN6 1383 aa13.16□□□□□ -0.3
SNED1-211ENST00000491761 CCT4P50991 539 aaKnown RBP13.16□□□□□ -0.3
SNED1-211ENST00000491761 NLRP6P59044 892 aa13.16□□□□□ -0.3
SNED1-211ENST00000491761 ANKRD44Q8N8A2 993 aa13.16□□□□□ -0.3
SNED1-211ENST00000491761 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
SNED1-211ENST00000491761 TSPOAP1O95153 1857 aa13.15□□□□□ -0.3
SNED1-211ENST00000491761 CHL1O00533 1208 aa13.15□□□□□ -0.3
SNED1-211ENST00000491761 KRT24Q2M2I5 525 aa13.15□□□□□ -0.3
SNED1-211ENST00000491761 KIF24Q5T7B8 1368 aa13.15□□□□□ -0.3
SNED1-211ENST00000491761 CLTCQ00610 1675 aaKnown RBP13.15□□□□□ -0.3
SNED1-211ENST00000491761 AMOTL2Q9Y2J4 779 aa13.15□□□□□ -0.3
SNED1-211ENST00000491761 PRR36Q9H6K5 1346 aa13.15□□□□□ -0.3
SNED1-211ENST00000491761 MCCP23508 829 aa13.15□□□□□ -0.31
SNED1-211ENST00000491761 PLEKHG3A1L390 1219 aa13.14□□□□□ -0.31
SNED1-211ENST00000491761 EVA1CP58658 441 aa13.14□□□□□ -0.31
SNED1-211ENST00000491761 FKBP5Q13451 457 aaPredicted RBP13.14□□□□□ -0.31
SNED1-211ENST00000491761 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.14□□□□□ -0.31
SNED1-211ENST00000491761 ATF3P18847 181 aa13.14□□□□□ -0.31
SNED1-211ENST00000491761 TTC22Q5TAA0 569 aa13.14□□□□□ -0.31
SNED1-211ENST00000491761 CEBPAP49715 358 aaPredicted RBP13.14□□□□□ -0.31
SNED1-211ENST00000491761 FAM43AQ8N2R8 423 aa13.14□□□□□ -0.31
SNED1-211ENST00000491761 KIF20BQ96Q89 1820 aa13.14□□□□□ -0.31
SNED1-211ENST00000491761 PIK3R4Q99570 1358 aa13.14□□□□□ -0.31
SNED1-211ENST00000491761 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
SNED1-211ENST00000491761 ANKRD26Q9UPS8 1709 aa13.13□□□□□ -0.31
SNED1-211ENST00000491761 MRE11P49959 708 aa13.13□□□□□ -0.31
SNED1-211ENST00000491761 PLEKHM2Q8IWE5 1019 aa13.13□□□□□ -0.31
SNED1-211ENST00000491761 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
SNED1-211ENST00000491761 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
SNED1-211ENST00000491761 GNAI2P04899 355 aa13.13□□□□□ -0.31
SNED1-211ENST00000491761 SIRT2Q8IXJ6 389 aa13.13□□□□□ -0.31
SNED1-211ENST00000491761 MPNDQ8N594 471 aa13.12□□□□□ -0.31
SNED1-211ENST00000491761 NECTIN2Q92692 538 aa13.12□□□□□ -0.31
SNED1-211ENST00000491761 TNPO1Q92973 898 aaKnown RBP13.12□□□□□ -0.31
SNED1-211ENST00000491761 CHMP3Q9Y3E7 222 aa13.12□□□□□ -0.31
SNED1-211ENST00000491761 SPATA31D1Q6ZQQ2 1576 aa13.12□□□□□ -0.31
SNED1-211ENST00000491761 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
SNED1-211ENST00000491761 GNAI3P08754 354 aa13.12□□□□□ -0.31
SNED1-211ENST00000491761 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
SNED1-211ENST00000491761 MEIS3Q99687 375 aa13.12□□□□□ -0.31
SNED1-211ENST00000491761 KIAA0232Q92628 1395 aa13.12□□□□□ -0.31
SNED1-211ENST00000491761 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
SNED1-211ENST00000491761 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
SNED1-211ENST00000491761 NUTM2GQ5VZR2 741 aa13.11□□□□□ -0.31
SNED1-211ENST00000491761 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
SNED1-211ENST00000491761 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
SNED1-211ENST00000491761 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
SNED1-211ENST00000491761 THEMISQ8N1K5 641 aaPredicted RBP13.11□□□□□ -0.31
SNED1-211ENST00000491761 NUCB2P80303 420 aa13.11□□□□□ -0.31
SNED1-211ENST00000491761 CDC42BPGQ6DT37 1551 aa13.11□□□□□ -0.31
SNED1-211ENST00000491761 CHMP4AQ9BY43 222 aa13.11□□□□□ -0.31
SNED1-211ENST00000491761 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
SNED1-211ENST00000491761 PODXL2Q9NZ53 605 aa13.11□□□□□ -0.31
SNED1-211ENST00000491761 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
SNED1-211ENST00000491761 PSME1Q06323 249 aa13.1□□□□□ -0.31
SNED1-211ENST00000491761 MTHFSDQ2M296 383 aaKnown RBP13.1□□□□□ -0.31
SNED1-211ENST00000491761 ISY1Q9ULR0 285 aaKnown RBP13.1□□□□□ -0.31
SNED1-211ENST00000491761 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
SNED1-211ENST00000491761 F6X3S4 739 aa13.1□□□□□ -0.31
SNED1-211ENST00000491761 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
SNED1-211ENST00000491761 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
SNED1-211ENST00000491761 FLT4P35916 1363 aa13.09□□□□□ -0.31
SNED1-211ENST00000491761 CPS1P31327 1500 aa13.09□□□□□ -0.31
SNED1-211ENST00000491761 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
SNED1-211ENST00000491761 ERC2O15083 957 aa13.09□□□□□ -0.31
SNED1-211ENST00000491761 LTKP29376 864 aa13.09□□□□□ -0.31
SNED1-211ENST00000491761 RNF214Q8ND24 703 aa13.09□□□□□ -0.31
SNED1-211ENST00000491761 FOXO3O43524 673 aa13.09□□□□□ -0.31
SNED1-211ENST00000491761 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
SNED1-211ENST00000491761 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
SNED1-211ENST00000491761 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
SNED1-211ENST00000491761 RILPL2Q969X0 211 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms