RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 TSC1Q92574 1164 aa6.65□□□□□ -1.35
CLIP4-211ENST00000491701 SYMPKQ92797 1274 aaKnown RBP6.65□□□□□ -1.35
CLIP4-211ENST00000491701 ZNF428Q96B54 188 aa6.65□□□□□ -1.35
CLIP4-211ENST00000491701 STK17AQ9UEE5 414 aa6.65□□□□□ -1.35
CLIP4-211ENST00000491701 LIMD1Q9UGP4 676 aa6.65□□□□□ -1.35
CLIP4-211ENST00000491701 CDK11AQ9UQ88 783 aaPredicted RBP6.65□□□□□ -1.35
CLIP4-211ENST00000491701 PCDHB15Q9Y5E8 787 aa6.65□□□□□ -1.35
CLIP4-211ENST00000491701 DNMT1P26358 1616 aaKnown RBP6.64□□□□□ -1.35
CLIP4-211ENST00000491701 HNRNPMP52272 730 aaKnown RBP eCLIP6.64□□□□□ -1.35
CLIP4-211ENST00000491701 RSBN1LQ6PCB5 846 aaPredicted RBP6.64□□□□□ -1.35
CLIP4-211ENST00000491701 PROSER2Q86WR7 435 aaPredicted RBP6.64□□□□□ -1.35
CLIP4-211ENST00000491701 NAIPQ13075 1403 aa6.64□□□□□ -1.35
CLIP4-211ENST00000491701 MYO5CQ9NQX4 1742 aa6.63□□□□□ -1.35
CLIP4-211ENST00000491701 E9PSI1 815 aa6.63□□□□□ -1.35
CLIP4-211ENST00000491701 MCM6Q14566 821 aa6.63□□□□□ -1.35
CLIP4-211ENST00000491701 SKIV2LQ15477 1246 aaKnown RBP6.63□□□□□ -1.35
CLIP4-211ENST00000491701 SH3D19Q5HYK7 790 aa6.63□□□□□ -1.35
CLIP4-211ENST00000491701 RETREG2Q8NC44 543 aa6.63□□□□□ -1.35
CLIP4-211ENST00000491701 CABLES1Q8TDN4 633 aa6.63□□□□□ -1.35
CLIP4-211ENST00000491701 AKNAQ7Z591 1439 aa6.63□□□□□ -1.35
CLIP4-211ENST00000491701 CAMSAP2Q08AD1 1489 aa6.63□□□□□ -1.35
CLIP4-211ENST00000491701 GLI2P10070 1586 aa6.63□□□□□ -1.35
CLIP4-211ENST00000491701 TTC24A2A3L6 582 aaPredicted RBP6.62□□□□□ -1.35
CLIP4-211ENST00000491701 FMNL1O95466 1100 aaPredicted RBP6.62□□□□□ -1.35
CLIP4-211ENST00000491701 SMPD1P17405 629 aa6.62□□□□□ -1.35
CLIP4-211ENST00000491701 FAM50AQ14320 339 aaKnown RBP6.62□□□□□ -1.35
CLIP4-211ENST00000491701 Q3C1V9 767 aa6.62□□□□□ -1.35
CLIP4-211ENST00000491701 RNF19BQ6ZMZ0 732 aa6.62□□□□□ -1.35
CLIP4-211ENST00000491701 FNBP4Q8N3X1 1017 aaPredicted RBP6.62□□□□□ -1.35
CLIP4-211ENST00000491701 CFDP1Q9UEE9 299 aaPredicted RBP6.62□□□□□ -1.35
CLIP4-211ENST00000491701 PCDHGC3Q9UN70 934 aa6.62□□□□□ -1.35
CLIP4-211ENST00000491701 DAPK1P53355 1430 aa6.62□□□□□ -1.35
CLIP4-211ENST00000491701 TRAPPC8Q9Y2L5 1435 aa6.62□□□□□ -1.35
CLIP4-211ENST00000491701 ARAP3Q8WWN8 1544 aa6.62□□□□□ -1.35
CLIP4-211ENST00000491701 ARHGEF5Q12774 1597 aa6.62□□□□□ -1.35
CLIP4-211ENST00000491701 ITSN2Q9NZM3 1697 aa6.62□□□□□ -1.35
CLIP4-211ENST00000491701 CROCC2H7BZ55 1655 aa6.61□□□□□ -1.35
CLIP4-211ENST00000491701 MAP3K4Q9Y6R4 1608 aa6.61□□□□□ -1.35
CLIP4-211ENST00000491701 NCOA1Q15788 1441 aa6.61□□□□□ -1.35
CLIP4-211ENST00000491701 SETD5Q9C0A6 1442 aa6.61□□□□□ -1.35
CLIP4-211ENST00000491701 SPTLC1O15269 473 aa6.61□□□□□ -1.35
CLIP4-211ENST00000491701 SNRPBP14678 240 aaKnown RBP6.61□□□□□ -1.35
CLIP4-211ENST00000491701 IRF5Q13568 498 aa6.61□□□□□ -1.35
CLIP4-211ENST00000491701 QPCTQ16769 361 aa6.61□□□□□ -1.35
CLIP4-211ENST00000491701 ATP13A2Q9NQ11 1180 aa6.61□□□□□ -1.35
CLIP4-211ENST00000491701 ADGRL2O95490 1459 aa6.6□□□□□ -1.35
CLIP4-211ENST00000491701 KIAA1107Q9UPP5 1409 aa6.6□□□□□ -1.35
CLIP4-211ENST00000491701 DHX57Q6P158 1386 aaKnown RBP6.6□□□□□ -1.35
CLIP4-211ENST00000491701 RAB3GAP2Q9H2M9 1393 aa6.6□□□□□ -1.35
CLIP4-211ENST00000491701 HSP90B1P14625 803 aaKnown RBP6.6□□□□□ -1.35
CLIP4-211ENST00000491701 ITGAEP38570 1179 aa6.6□□□□□ -1.35
CLIP4-211ENST00000491701 INSM1Q01101 510 aaPredicted RBP6.6□□□□□ -1.35
CLIP4-211ENST00000491701 MTMR2Q13614 643 aa6.6□□□□□ -1.35
CLIP4-211ENST00000491701 BRICD5Q6PL45 260 aa6.6□□□□□ -1.35
CLIP4-211ENST00000491701 COL17A1Q9UMD9 1497 aaPredicted RBP6.6□□□□□ -1.35
CLIP4-211ENST00000491701 HFM1A2PYH4 1435 aa6.6□□□□□ -1.35
CLIP4-211ENST00000491701 WNT7AO00755 349 aa6.59□□□□□ -1.35
CLIP4-211ENST00000491701 ZBTB24O43167 697 aaPredicted RBP6.59□□□□□ -1.35
CLIP4-211ENST00000491701 ZBTB3Q9H5J0 574 aa6.59□□□□□ -1.35
CLIP4-211ENST00000491701 RRP7BPQ9NSQ0 103 aa6.59□□□□□ -1.35
CLIP4-211ENST00000491701 CHIC2Q9UKJ5 165 aa6.59□□□□□ -1.35
CLIP4-211ENST00000491701 SALL2Q9Y467 1007 aaPredicted RBP6.59□□□□□ -1.35
CLIP4-211ENST00000491701 MAST1Q9Y2H9 1570 aa6.59□□□□□ -1.35
CLIP4-211ENST00000491701 ABCC1P33527 1531 aa6.59□□□□□ -1.35
CLIP4-211ENST00000491701 ROCK1Q13464 1354 aa6.59□□□□□ -1.35
CLIP4-211ENST00000491701 J3QL48 77 aa6.59□□□□□ -1.36
CLIP4-211ENST00000491701 TERTO14746 1132 aaKnown RBP6.59□□□□□ -1.36
CLIP4-211ENST00000491701 CDK11BP21127 795 aaKnown RBP6.59□□□□□ -1.36
CLIP4-211ENST00000491701 MSS51Q4VC12 460 aa6.59□□□□□ -1.36
CLIP4-211ENST00000491701 SNIP1Q8TAD8 396 aaKnown RBP6.59□□□□□ -1.36
CLIP4-211ENST00000491701 USB1Q9BQ65 265 aaKnown RBP6.59□□□□□ -1.36
CLIP4-211ENST00000491701 GCC2Q8IWJ2 1684 aa6.58□□□□□ -1.36
CLIP4-211ENST00000491701 RTL5Q5HYW3 569 aaPredicted RBP6.58□□□□□ -1.36
CLIP4-211ENST00000491701 EFCAB2Q5VUJ9 269 aa6.58□□□□□ -1.36
CLIP4-211ENST00000491701 AFAP1Q8N556 730 aa6.58□□□□□ -1.36
CLIP4-211ENST00000491701 PRR7Q8TB68 274 aa6.58□□□□□ -1.36
CLIP4-211ENST00000491701 MRGPRX2Q96LB1 330 aa6.58□□□□□ -1.36
CLIP4-211ENST00000491701 TRIM47Q96LD4 638 aa6.58□□□□□ -1.36
CLIP4-211ENST00000491701 SYCP2Q9BX26 1530 aa6.58□□□□□ -1.36
CLIP4-211ENST00000491701 KIDINS220Q9ULH0 1771 aa6.57□□□□□ -1.36
CLIP4-211ENST00000491701 CD109Q6YHK3 1445 aa6.57□□□□□ -1.36
CLIP4-211ENST00000491701 AP1G2O75843 785 aa6.57□□□□□ -1.36
CLIP4-211ENST00000491701 TRIM32Q13049 653 aa6.57□□□□□ -1.36
CLIP4-211ENST00000491701 POM121Q96HA1 1249 aa6.57□□□□□ -1.36
CLIP4-211ENST00000491701 PUS7Q96PZ0 661 aaKnown RBP6.57□□□□□ -1.36
CLIP4-211ENST00000491701 ADGBQ8N7X0 1667 aa6.57□□□□□ -1.36
CLIP4-211ENST00000491701 FRMPD1Q5SYB0 1578 aa6.56□□□□□ -1.36
CLIP4-211ENST00000491701 ARHGAP5Q13017 1502 aa6.56□□□□□ -1.36
CLIP4-211ENST00000491701 PATL2C9JE40 543 aaKnown RBP6.56□□□□□ -1.36
CLIP4-211ENST00000491701 GJA5P36382 358 aa6.56□□□□□ -1.36
CLIP4-211ENST00000491701 PDE4CQ08493 712 aa6.56□□□□□ -1.36
CLIP4-211ENST00000491701 RETREG3Q86VR2 466 aa6.56□□□□□ -1.36
CLIP4-211ENST00000491701 HPS1Q92902 700 aa6.56□□□□□ -1.36
CLIP4-211ENST00000491701 RICTORQ6R327 1708 aa6.55□□□□□ -1.36
CLIP4-211ENST00000491701 FANCAO15360 1455 aa6.55□□□□□ -1.36
CLIP4-211ENST00000491701 PZPP20742 1482 aa6.55□□□□□ -1.36
CLIP4-211ENST00000491701 TEX14Q8IWB6 1497 aa6.55□□□□□ -1.36
CLIP4-211ENST00000491701 SHANK2Q9UPX8 1470 aa6.55□□□□□ -1.36
CLIP4-211ENST00000491701 LILRB3O75022 631 aa6.55□□□□□ -1.36
CLIP4-211ENST00000491701 PPP1R15AO75807 674 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms