RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 MARCH10Q8NA82 808 aaPredicted RBP17.32■□□□□ 0.36
LIMK1-207ENST00000491052 BTAF1O14981 1849 aa17.31■□□□□ 0.36
LIMK1-207ENST00000491052 IGSF1Q8N6C5 1336 aa17.31■□□□□ 0.36
LIMK1-207ENST00000491052 SF3B2Q13435 895 aaKnown RBP17.31■□□□□ 0.36
LIMK1-207ENST00000491052 ITGB4P16144 1822 aa17.31■□□□□ 0.36
LIMK1-207ENST00000491052 CCDC125Q86Z20 511 aa17.3■□□□□ 0.36
LIMK1-207ENST00000491052 ZCRB1Q8TBF4 217 aaKnown RBP17.3■□□□□ 0.36
LIMK1-207ENST00000491052 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
LIMK1-207ENST00000491052 TRIM37O94972 964 aa17.29■□□□□ 0.36
LIMK1-207ENST00000491052 IL13P35225 146 aa17.29■□□□□ 0.36
LIMK1-207ENST00000491052 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
LIMK1-207ENST00000491052 CFAP53Q96M91 514 aa17.29■□□□□ 0.36
LIMK1-207ENST00000491052 TOGARAM1Q9Y4F4 1720 aa17.27■□□□□ 0.36
LIMK1-207ENST00000491052 BCL9O00512 1426 aa17.27■□□□□ 0.35
LIMK1-207ENST00000491052 RGPD3A6NKT7 1758 aaPredicted RBP17.27■□□□□ 0.35
LIMK1-207ENST00000491052 RGPD4Q7Z3J3 1758 aa17.27■□□□□ 0.35
LIMK1-207ENST00000491052 RALBP1Q15311 655 aa17.26■□□□□ 0.35
LIMK1-207ENST00000491052 SULT6B1Q6IMI4 303 aa17.26■□□□□ 0.35
LIMK1-207ENST00000491052 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
LIMK1-207ENST00000491052 PCDH11XQ9BZA7 1347 aa17.25■□□□□ 0.35
LIMK1-207ENST00000491052 PCDH11YQ9BZA8 1340 aa17.25■□□□□ 0.35
LIMK1-207ENST00000491052 U2SURPO15042 1029 aaKnown RBP17.25■□□□□ 0.35
LIMK1-207ENST00000491052 RREB1Q92766 1687 aa17.25■□□□□ 0.35
LIMK1-207ENST00000491052 KDRP35968 1356 aa17.25■□□□□ 0.35
LIMK1-207ENST00000491052 HMOX1P09601 288 aa17.24■□□□□ 0.35
LIMK1-207ENST00000491052 BAG6P46379 1132 aa17.24■□□□□ 0.35
LIMK1-207ENST00000491052 DEFB132Q7Z7B7 95 aa17.24■□□□□ 0.35
LIMK1-207ENST00000491052 ACSBG1Q96GR2 724 aa17.24■□□□□ 0.35
LIMK1-207ENST00000491052 SPG7Q9UQ90 795 aa17.24■□□□□ 0.35
LIMK1-207ENST00000491052 SCN11AQ9UI33 1791 aa17.23■□□□□ 0.35
LIMK1-207ENST00000491052 NUP188Q5SRE5 1749 aa17.22■□□□□ 0.35
LIMK1-207ENST00000491052 PLEKHG2Q9H7P9 1386 aa17.22■□□□□ 0.35
LIMK1-207ENST00000491052 APBA3O96018 575 aa17.21■□□□□ 0.35
LIMK1-207ENST00000491052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.21■□□□□ 0.35
LIMK1-207ENST00000491052 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.34
LIMK1-207ENST00000491052 CYP27B1O15528 508 aa17.2■□□□□ 0.34
LIMK1-207ENST00000491052 PLEKHO1Q53GL0 409 aaPredicted RBP17.2■□□□□ 0.34
LIMK1-207ENST00000491052 PTF1AQ7RTS3 328 aa17.2■□□□□ 0.34
LIMK1-207ENST00000491052 BCL11BQ9C0K0 894 aaPredicted RBP17.2■□□□□ 0.34
LIMK1-207ENST00000491052 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
LIMK1-207ENST00000491052 KCNQ2O43526 872 aa17.19■□□□□ 0.34
LIMK1-207ENST00000491052 EN1Q05925 392 aaPredicted RBP17.19■□□□□ 0.34
LIMK1-207ENST00000491052 SYTL4Q96C24 671 aaPredicted RBP17.19■□□□□ 0.34
LIMK1-207ENST00000491052 DLG5Q8TDM6 1919 aa17.19■□□□□ 0.34
LIMK1-207ENST00000491052 AMOTQ4VCS5 1084 aa17.18■□□□□ 0.34
LIMK1-207ENST00000491052 ZNF530Q6P9A1 599 aaPredicted RBP17.18■□□□□ 0.34
LIMK1-207ENST00000491052 PRKRIP1Q9H875 184 aaPredicted RBP17.18■□□□□ 0.34
LIMK1-207ENST00000491052 LY75O60449 1722 aa17.18■□□□□ 0.34
LIMK1-207ENST00000491052 U2AF1L5P0DN76 240 aaPredicted RBP17.17■□□□□ 0.34
LIMK1-207ENST00000491052 U2AF1Q01081 240 aaKnown RBP eCLIP17.17■□□□□ 0.34
LIMK1-207ENST00000491052 IFNL2Q8IZJ0 200 aa17.17■□□□□ 0.34
LIMK1-207ENST00000491052 PHKG2P15735 406 aa17.16■□□□□ 0.34
LIMK1-207ENST00000491052 PRIM1P49642 420 aaKnown RBP17.16■□□□□ 0.34
LIMK1-207ENST00000491052 EZH2Q15910 746 aaKnown RBP17.15■□□□□ 0.34
LIMK1-207ENST00000491052 C1orf141Q5JVX7 400 aa17.15■□□□□ 0.34
LIMK1-207ENST00000491052 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
LIMK1-207ENST00000491052 NKX1-1Q15270 411 aaPredicted RBP17.13■□□□□ 0.33
LIMK1-207ENST00000491052 CAMKK2Q96RR4 588 aa17.13■□□□□ 0.33
LIMK1-207ENST00000491052 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
LIMK1-207ENST00000491052 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
LIMK1-207ENST00000491052 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
LIMK1-207ENST00000491052 ADAMTS7Q9UKP4 1686 aa17.12■□□□□ 0.33
LIMK1-207ENST00000491052 KDM6AO15550 1401 aaPredicted RBP17.12■□□□□ 0.33
LIMK1-207ENST00000491052 PLSCR1O15162 318 aa17.11■□□□□ 0.33
LIMK1-207ENST00000491052 ANP32CO43423 234 aa17.11■□□□□ 0.33
LIMK1-207ENST00000491052 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
LIMK1-207ENST00000491052 SIPA1L3O60292 1781 aaPredicted RBP17.1■□□□□ 0.33
LIMK1-207ENST00000491052 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
LIMK1-207ENST00000491052 DCAF5Q96JK2 942 aa17.1■□□□□ 0.33
LIMK1-207ENST00000491052 C5P01031 1676 aa17.1■□□□□ 0.33
LIMK1-207ENST00000491052 FCHSD2O94868 740 aa17.09■□□□□ 0.33
LIMK1-207ENST00000491052 AKAP4Q5JQC9 854 aa17.09■□□□□ 0.33
LIMK1-207ENST00000491052 GAS2L2Q8NHY3 880 aa17.08■□□□□ 0.32
LIMK1-207ENST00000491052 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
LIMK1-207ENST00000491052 TUBGCP6Q96RT7 1819 aa17.07■□□□□ 0.32
LIMK1-207ENST00000491052 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
LIMK1-207ENST00000491052 NEFMP07197 916 aa17.07■□□□□ 0.32
LIMK1-207ENST00000491052 TXNRD1Q16881 649 aa17.07■□□□□ 0.32
LIMK1-207ENST00000491052 PHACTR3Q96KR7 559 aa17.07■□□□□ 0.32
LIMK1-207ENST00000491052 PAPPAQ13219 1627 aa17.07■□□□□ 0.32
LIMK1-207ENST00000491052 WDR43Q15061 677 aaKnown RBP eCLIP17.06■□□□□ 0.32
LIMK1-207ENST00000491052 PIGBQ92521 554 aa17.06■□□□□ 0.32
LIMK1-207ENST00000491052 MRC1P22897 1456 aa17.05■□□□□ 0.32
LIMK1-207ENST00000491052 ERVV-2B6SEH9 535 aa17.05■□□□□ 0.32
LIMK1-207ENST00000491052 CABP4P57796 275 aa17.05■□□□□ 0.32
LIMK1-207ENST00000491052 PALLDQ8WX93 1383 aa17.04■□□□□ 0.32
LIMK1-207ENST00000491052 MAPK8IP3Q9UPT6 1336 aa17.04■□□□□ 0.32
LIMK1-207ENST00000491052 PROM2Q8N271 834 aa17.04■□□□□ 0.32
LIMK1-207ENST00000491052 PNNQ9H307 717 aaKnown RBP17.04■□□□□ 0.32
LIMK1-207ENST00000491052 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
LIMK1-207ENST00000491052 SMARCC1Q92922 1105 aaPredicted RBP17.03■□□□□ 0.32
LIMK1-207ENST00000491052 QSER1Q2KHR3 1735 aa17.03■□□□□ 0.32
LIMK1-207ENST00000491052 UBR2Q8IWV8 1755 aa17.02■□□□□ 0.32
LIMK1-207ENST00000491052 ZNF831Q5JPB2 1677 aa17.02■□□□□ 0.32
LIMK1-207ENST00000491052 RNMTO43148 476 aaKnown RBP17.02■□□□□ 0.32
LIMK1-207ENST00000491052 NBPF14Q5TI25 921 aa17.02■□□□□ 0.32
LIMK1-207ENST00000491052 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
LIMK1-207ENST00000491052 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
LIMK1-207ENST00000491052 PSDA5PKW4 1024 aaPredicted RBP17.01■□□□□ 0.31
LIMK1-207ENST00000491052 SLC27A3Q5K4L6 730 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms