RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 ZCRB1Q8TBF4 217 aaKnown RBP20.85■□□□□ 0.93
COL27A1-206ENST00000490831 KCNQ2O43526 872 aa20.84■□□□□ 0.93
COL27A1-206ENST00000490831 TNNT2P45379 298 aaPredicted RBP20.83■□□□□ 0.93
COL27A1-206ENST00000490831 MORC1Q86VD1 984 aa20.83■□□□□ 0.93
COL27A1-206ENST00000490831 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
COL27A1-206ENST00000490831 DDX54Q8TDD1 881 aaKnown RBP20.82■□□□□ 0.92
COL27A1-206ENST00000490831 TATP17735 454 aaPredicted RBP20.81■□□□□ 0.92
COL27A1-206ENST00000490831 PSDA5PKW4 1024 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-206ENST00000490831 EIF4A2Q14240 407 aaKnown RBP20.8■□□□□ 0.92
COL27A1-206ENST00000490831 PROM2Q8N271 834 aa20.8■□□□□ 0.92
COL27A1-206ENST00000490831 ACSBG1Q96GR2 724 aa20.8■□□□□ 0.92
COL27A1-206ENST00000490831 EYA1Q99502 592 aa20.8■□□□□ 0.92
COL27A1-206ENST00000490831 R3HDM1Q15032 1099 aaKnown RBP20.79■□□□□ 0.92
COL27A1-206ENST00000490831 NPC1L1Q9UHC9 1359 aa20.79■□□□□ 0.92
COL27A1-206ENST00000490831 PLEKHG2Q9H7P9 1386 aa20.78■□□□□ 0.92
COL27A1-206ENST00000490831 NBPF14Q5TI25 921 aa20.78■□□□□ 0.92
COL27A1-206ENST00000490831 PKD1L3Q7Z443 1732 aa20.78■□□□□ 0.92
COL27A1-206ENST00000490831 BTAF1O14981 1849 aa20.77■□□□□ 0.92
COL27A1-206ENST00000490831 PCDH11XQ9BZA7 1347 aa20.77■□□□□ 0.91
COL27A1-206ENST00000490831 PCDH11YQ9BZA8 1340 aa20.77■□□□□ 0.91
COL27A1-206ENST00000490831 TXNRD1Q16881 649 aa20.76■□□□□ 0.91
COL27A1-206ENST00000490831 IGSF1Q8N6C5 1336 aa20.76■□□□□ 0.91
COL27A1-206ENST00000490831 LRP5O75197 1615 aa20.75■□□□□ 0.91
COL27A1-206ENST00000490831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.75■□□□□ 0.915e-24■□□□□ 9.8
COL27A1-206ENST00000490831 DOT1LQ8TEK3 1739 aa20.74■□□□□ 0.91
COL27A1-206ENST00000490831 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
COL27A1-206ENST00000490831 CYP27B1O15528 508 aa20.73■□□□□ 0.91
COL27A1-206ENST00000490831 PRIM1P49642 420 aaKnown RBP20.73■□□□□ 0.91
COL27A1-206ENST00000490831 ANO8Q9HCE9 1232 aaPredicted RBP20.72■□□□□ 0.91
COL27A1-206ENST00000490831 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
COL27A1-206ENST00000490831 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
COL27A1-206ENST00000490831 PAPPAQ13219 1627 aa20.69■□□□□ 0.9
COL27A1-206ENST00000490831 CC2D1BQ5T0F9 858 aaKnown RBP20.69■□□□□ 0.9
COL27A1-206ENST00000490831 IL13P35225 146 aa20.68■□□□□ 0.9
COL27A1-206ENST00000490831 MTHFSP49914 203 aa20.68■□□□□ 0.9
COL27A1-206ENST00000490831 SLC27A3Q5K4L6 730 aa20.67■□□□□ 0.9
COL27A1-206ENST00000490831 SYTL4Q96C24 671 aaPredicted RBP20.67■□□□□ 0.9
COL27A1-206ENST00000490831 LRRC4BQ9NT99 713 aa20.66■□□□□ 0.9
COL27A1-206ENST00000490831 KDRP35968 1356 aa20.66■□□□□ 0.9
COL27A1-206ENST00000490831 LY75O60449 1722 aa20.66■□□□□ 0.9
COL27A1-206ENST00000490831 TOGARAM1Q9Y4F4 1720 aa20.66■□□□□ 0.9
COL27A1-206ENST00000490831 SLC15A2Q16348 729 aa20.65■□□□□ 0.9
COL27A1-206ENST00000490831 PHKG2P15735 406 aa20.64■□□□□ 0.89
COL27A1-206ENST00000490831 IFNL2Q8IZJ0 200 aa20.64■□□□□ 0.89
COL27A1-206ENST00000490831 STK32BQ9NY57 414 aa20.64■□□□□ 0.89
COL27A1-206ENST00000490831 CASZ1Q86V15 1759 aa20.64■□□□□ 0.89
COL27A1-206ENST00000490831 AEBP1Q8IUX7 1158 aa20.62■□□□□ 0.89
COL27A1-206ENST00000490831 ITGB4P16144 1822 aa20.62■□□□□ 0.89
COL27A1-206ENST00000490831 AMOTQ4VCS5 1084 aa20.61■□□□□ 0.89
COL27A1-206ENST00000490831 COL3A1P02461 1466 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-206ENST00000490831 PLEKHO1Q53GL0 409 aaPredicted RBP20.6■□□□□ 0.89
COL27A1-206ENST00000490831 SULT6B1Q6IMI4 303 aa20.6■□□□□ 0.89
COL27A1-206ENST00000490831 MPRIPQ6WCQ1 1025 aa20.59■□□□□ 0.89
COL27A1-206ENST00000490831 AKT1S1Q96B36 256 aa20.59■□□□□ 0.89
COL27A1-206ENST00000490831 DIAPH1O60610 1272 aaKnown RBP20.58■□□□□ 0.89
COL27A1-206ENST00000490831 ZNF827Q17R98 1081 aa20.58■□□□□ 0.89
COL27A1-206ENST00000490831 PIGBQ92521 554 aa20.58■□□□□ 0.89
COL27A1-206ENST00000490831 HSP90AB1P08238 724 aaKnown RBP20.57■□□□□ 0.88
COL27A1-206ENST00000490831 PDGFDQ9GZP0 370 aaPredicted RBP20.57■□□□□ 0.88
COL27A1-206ENST00000490831 SPON1Q9HCB6 807 aa20.57■□□□□ 0.88
COL27A1-206ENST00000490831 PALLDQ8WX93 1383 aa20.57■□□□□ 0.88
COL27A1-206ENST00000490831 SMARCC1Q92922 1105 aaPredicted RBP20.56■□□□□ 0.88
COL27A1-206ENST00000490831 DCAF5Q96JK2 942 aa20.56■□□□□ 0.88
COL27A1-206ENST00000490831 CCNL1Q9UK58 526 aaPredicted RBP20.56■□□□□ 0.88
COL27A1-206ENST00000490831 QSER1Q2KHR3 1735 aa20.56■□□□□ 0.88
COL27A1-206ENST00000490831 ERVV-2B6SEH9 535 aa20.55■□□□□ 0.88
COL27A1-206ENST00000490831 KCNQ4P56696 695 aa20.55■□□□□ 0.88
COL27A1-206ENST00000490831 ZNF530Q6P9A1 599 aaPredicted RBP20.55■□□□□ 0.88
COL27A1-206ENST00000490831 HMGB2P26583 209 aaKnown RBP20.54■□□□□ 0.88
COL27A1-206ENST00000490831 TMOD3Q9NYL9 352 aa20.54■□□□□ 0.88
COL27A1-206ENST00000490831 KDM6AO15550 1401 aaPredicted RBP20.53■□□□□ 0.88
COL27A1-206ENST00000490831 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
COL27A1-206ENST00000490831 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
COL27A1-206ENST00000490831 ZBTB7AO95365 584 aa20.5■□□□□ 0.87
COL27A1-206ENST00000490831 HMOX1P09601 288 aa20.5■□□□□ 0.87
COL27A1-206ENST00000490831 C1orf141Q5JVX7 400 aa20.5■□□□□ 0.87
COL27A1-206ENST00000490831 MTFR1LQ9H019 292 aa20.5■□□□□ 0.87
COL27A1-206ENST00000490831 C5P01031 1676 aa20.5■□□□□ 0.87
COL27A1-206ENST00000490831 TAF1LQ8IZX4 1826 aa20.5■□□□□ 0.87
COL27A1-206ENST00000490831 TUBGCP6Q96RT7 1819 aa20.5■□□□□ 0.87
COL27A1-206ENST00000490831 PNPLA7Q6ZV29 1317 aa20.5■□□□□ 0.87
COL27A1-206ENST00000490831 PTGER2P43116 358 aa20.49■□□□□ 0.87
COL27A1-206ENST00000490831 AKAP4Q5JQC9 854 aa20.49■□□□□ 0.87
COL27A1-206ENST00000490831 ASAP1Q9ULH1 1129 aa20.49■□□□□ 0.87
COL27A1-206ENST00000490831 SLC16A10Q8TF71 515 aa20.48■□□□□ 0.87
COL27A1-206ENST00000490831 CFAP53Q96M91 514 aa20.48■□□□□ 0.87
COL27A1-206ENST00000490831 SGIP1Q9BQI5 828 aa20.48■□□□□ 0.87
COL27A1-206ENST00000490831 ATG3Q9NT62 314 aa20.48■□□□□ 0.87
COL27A1-206ENST00000490831 TFCP2L1Q9NZI6 479 aa20.48■□□□□ 0.87
COL27A1-206ENST00000490831 LOC102724428A0A0B4J2F2 783 aa20.47■□□□□ 0.87
COL27A1-206ENST00000490831 SIK1P57059 783 aa20.47■□□□□ 0.87
COL27A1-206ENST00000490831 SCN11AQ9UI33 1791 aa20.46■□□□□ 0.87
COL27A1-206ENST00000490831 ZNF831Q5JPB2 1677 aa20.45■□□□□ 0.86
COL27A1-206ENST00000490831 C4BP0C0L5 1744 aa20.45■□□□□ 0.86
COL27A1-206ENST00000490831 COL24A1Q17RW2 1714 aa20.45■□□□□ 0.86
COL27A1-206ENST00000490831 U2SURPO15042 1029 aaKnown RBP20.45■□□□□ 0.86
COL27A1-206ENST00000490831 CABP4P57796 275 aa20.45■□□□□ 0.86
COL27A1-206ENST00000490831 MTHFSDQ2M296 383 aaKnown RBP20.45■□□□□ 0.86
COL27A1-206ENST00000490831 ATF5Q9Y2D1 282 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-206ENST00000490831 ADAMTS7Q9UKP4 1686 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms