RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 RRS1Q15050 365 aaKnown RBP12.44□□□□□ -0.42
BRD9-209ENST00000490814 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
BRD9-209ENST00000490814 CIZ1Q9ULV3 898 aaPredicted RBP12.44□□□□□ -0.42
BRD9-209ENST00000490814 VIRMAQ69YN4 1812 aaKnown RBP12.44□□□□□ -0.42
BRD9-209ENST00000490814 CGNQ9P2M7 1197 aaKnown RBP12.43□□□□□ -0.42
BRD9-209ENST00000490814 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
BRD9-209ENST00000490814 METP08581 1390 aa12.43□□□□□ -0.42
BRD9-209ENST00000490814 GAS2L2Q8NHY3 880 aa12.43□□□□□ -0.42
BRD9-209ENST00000490814 ALDH1L2Q3SY69 923 aa12.43□□□□□ -0.42
BRD9-209ENST00000490814 NUTM2GQ5VZR2 741 aa12.43□□□□□ -0.42
BRD9-209ENST00000490814 GCC1Q96CN9 775 aa12.43□□□□□ -0.42
BRD9-209ENST00000490814 BCCIPQ9P287 314 aaKnown RBP eCLIP12.43□□□□□ -0.42
BRD9-209ENST00000490814 MROH2AA6NES4 1674 aa12.43□□□□□ -0.42
BRD9-209ENST00000490814 ZBTB7BO15156 539 aaPredicted RBP12.42□□□□□ -0.42
BRD9-209ENST00000490814 ATF3P18847 181 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 RBM25P49756 843 aaKnown RBP12.42□□□□□ -0.42
BRD9-209ENST00000490814 GNAI1P63096 354 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 NFE2L2Q16236 605 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
BRD9-209ENST00000490814 DDX17Q92841 729 aaKnown RBP12.42□□□□□ -0.42
BRD9-209ENST00000490814 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 ARHGAP31Q2M1Z3 1444 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 IL16Q14005 1332 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 SHPRHQ149N8 1683 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 QRICH2Q9H0J4 1663 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 A2ML1A8K2U0 1454 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 VAMP4O75379 141 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 CDC45O75419 566 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 NOL8Q76FK4 1167 aaKnown RBP12.42□□□□□ -0.42
BRD9-209ENST00000490814 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
BRD9-209ENST00000490814 CAMSAP1Q5T5Y3 1602 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 UBAP1LF5GYI3 381 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 ESCO1Q5FWF5 840 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 NME9Q86XW9 330 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 C8orf58Q8NAV2 365 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 POLKQ9UBT6 870 aa12.42□□□□□ -0.42
BRD9-209ENST00000490814 SNX21Q969T3 373 aa12.41□□□□□ -0.42
BRD9-209ENST00000490814 KIAA1210Q9ULL0 1709 aa12.41□□□□□ -0.42
BRD9-209ENST00000490814 SMARCA5O60264 1052 aaPredicted RBP12.41□□□□□ -0.42
BRD9-209ENST00000490814 SLC4A10Q6U841 1118 aa12.41□□□□□ -0.42
BRD9-209ENST00000490814 MRPL50Q8N5N7 158 aaKnown RBP12.41□□□□□ -0.42
BRD9-209ENST00000490814 PTMAP06454 111 aaKnown RBP12.41□□□□□ -0.42
BRD9-209ENST00000490814 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
BRD9-209ENST00000490814 BAG4O95429 457 aaKnown RBP12.4□□□□□ -0.42
BRD9-209ENST00000490814 CBX1P83916 185 aa12.4□□□□□ -0.42
BRD9-209ENST00000490814 FOXD4L6Q3SYB3 417 aaPredicted RBP12.4□□□□□ -0.42
BRD9-209ENST00000490814 FOXD4L3Q6VB84 417 aaPredicted RBP12.4□□□□□ -0.42
BRD9-209ENST00000490814 SETD1BQ9UPS6 1966 aaKnown RBP12.4□□□□□ -0.43
BRD9-209ENST00000490814 PPP1R9BQ96SB3 815 aa12.39□□□□□ -0.43
BRD9-209ENST00000490814 DEPDC5O75140 1603 aa12.39□□□□□ -0.43
BRD9-209ENST00000490814 SIRT2Q8IXJ6 389 aa12.39□□□□□ -0.43
BRD9-209ENST00000490814 NGDNQ8NEJ9 315 aaKnown RBP12.39□□□□□ -0.43
BRD9-209ENST00000490814 OTUD7AQ8TE49 926 aaPredicted RBP12.39□□□□□ -0.43
BRD9-209ENST00000490814 TULP4Q9NRJ4 1543 aa12.39□□□□□ -0.43
BRD9-209ENST00000490814 A0A0G2JS52 829 aa12.39□□□□□ -0.43
BRD9-209ENST00000490814 FOXO3O43524 673 aa12.39□□□□□ -0.43
BRD9-209ENST00000490814 API5Q9BZZ5 524 aaKnown RBP12.39□□□□□ -0.43
BRD9-209ENST00000490814 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
BRD9-209ENST00000490814 ADGRB3O60242 1522 aa12.38□□□□□ -0.43
BRD9-209ENST00000490814 C3P01024 1663 aa12.38□□□□□ -0.43
BRD9-209ENST00000490814 KLHL40Q2TBA0 621 aa12.38□□□□□ -0.43
BRD9-209ENST00000490814 HOMEZQ8IX15 550 aa12.38□□□□□ -0.43
BRD9-209ENST00000490814 TBX22Q9Y458 520 aa12.38□□□□□ -0.43
BRD9-209ENST00000490814 VWDEQ8N2E2 1590 aa12.38□□□□□ -0.43
BRD9-209ENST00000490814 PRPF40AO75400 957 aaKnown RBP12.38□□□□□ -0.43
BRD9-209ENST00000490814 CASC1Q6TDU7 716 aa12.38□□□□□ -0.43
BRD9-209ENST00000490814 MPNDQ8N594 471 aa12.38□□□□□ -0.43
BRD9-209ENST00000490814 RNF214Q8ND24 703 aa12.38□□□□□ -0.43
BRD9-209ENST00000490814 NRXN1Q9ULB1 1477 aa12.38□□□□□ -0.43
BRD9-209ENST00000490814 NPHP4O75161 1426 aaPredicted RBP12.38□□□□□ -0.43
BRD9-209ENST00000490814 ADGRB1O14514 1584 aa12.37□□□□□ -0.43
BRD9-209ENST00000490814 DDIT3P35638 169 aa12.37□□□□□ -0.43
BRD9-209ENST00000490814 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
BRD9-209ENST00000490814 CNPY4Q8N129 248 aa12.37□□□□□ -0.43
BRD9-209ENST00000490814 COG3Q96JB2 828 aa12.37□□□□□ -0.43
BRD9-209ENST00000490814 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
BRD9-209ENST00000490814 KIF2CQ99661 725 aa12.37□□□□□ -0.43
BRD9-209ENST00000490814 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
BRD9-209ENST00000490814 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
BRD9-209ENST00000490814 RBSNQ9H1K0 784 aa12.36□□□□□ -0.43
BRD9-209ENST00000490814 MIS18AQ9NYP9 233 aa12.36□□□□□ -0.43
BRD9-209ENST00000490814 GSPT1P15170 499 aaKnown RBP12.36□□□□□ -0.43
BRD9-209ENST00000490814 ZSCAN23Q3MJ62 389 aa12.36□□□□□ -0.43
BRD9-209ENST00000490814 MCM10Q7L590 875 aa12.36□□□□□ -0.43
BRD9-209ENST00000490814 CHAMP1Q96JM3 812 aa12.36□□□□□ -0.43
BRD9-209ENST00000490814 PIK3C2BO00750 1634 aa12.36□□□□□ -0.43
BRD9-209ENST00000490814 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
BRD9-209ENST00000490814 IFT57Q9NWB7 429 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 ADAMTSL3P82987 1691 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 NECTIN2Q92692 538 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 ORAI2Q96SN7 254 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 SETBP1Q9Y6X0 1596 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 LMTK3Q96Q04 1460 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
BRD9-209ENST00000490814 PKP1Q13835 747 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 TSHZ3Q63HK5 1081 aa12.35□□□□□ -0.43
BRD9-209ENST00000490814 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms