RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 PLCH1Q4KWH8 1693 aa17.25■□□□□ 0.35
HLA-DOA-205ENST00000490305 MAP3K5Q99683 1374 aa17.25■□□□□ 0.35
HLA-DOA-205ENST00000490305 GNAI1P63096 354 aa17.24■□□□□ 0.35
HLA-DOA-205ENST00000490305 IFT57Q9NWB7 429 aa17.24■□□□□ 0.35
HLA-DOA-205ENST00000490305 PARP4Q9UKK3 1724 aaKnown RBP17.24■□□□□ 0.35
HLA-DOA-205ENST00000490305 CRB1P82279 1406 aa17.23■□□□□ 0.35
HLA-DOA-205ENST00000490305 NUTM2BA6NNL0 878 aaPredicted RBP17.23■□□□□ 0.35
HLA-DOA-205ENST00000490305 NUTM2EB1AL46 878 aaPredicted RBP17.23■□□□□ 0.35
HLA-DOA-205ENST00000490305 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
HLA-DOA-205ENST00000490305 NUTM2AQ8IVF1 878 aaPredicted RBP17.23■□□□□ 0.35
HLA-DOA-205ENST00000490305 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
HLA-DOA-205ENST00000490305 SPG7Q9UQ90 795 aa17.23■□□□□ 0.35
HLA-DOA-205ENST00000490305 SUPT16HQ9Y5B9 1047 aaKnown RBP17.23■□□□□ 0.35
HLA-DOA-205ENST00000490305 NWD2Q9ULI1 1742 aa17.23■□□□□ 0.35
HLA-DOA-205ENST00000490305 ADAMTS2O95450 1211 aa17.22■□□□□ 0.35
HLA-DOA-205ENST00000490305 C1orf141Q5JVX7 400 aa17.22■□□□□ 0.35
HLA-DOA-205ENST00000490305 ZNF530Q6P9A1 599 aaPredicted RBP17.22■□□□□ 0.35
HLA-DOA-205ENST00000490305 NEFLP07196 543 aa17.21■□□□□ 0.35
HLA-DOA-205ENST00000490305 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.35
HLA-DOA-205ENST00000490305 CFAP44Q96MT7 982 aa17.21■□□□□ 0.35
HLA-DOA-205ENST00000490305 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
HLA-DOA-205ENST00000490305 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.34
HLA-DOA-205ENST00000490305 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
HLA-DOA-205ENST00000490305 ZNF853P0CG23 659 aa17.2■□□□□ 0.34
HLA-DOA-205ENST00000490305 HSPA1LP34931 641 aa17.2■□□□□ 0.34
HLA-DOA-205ENST00000490305 DCTN1Q14203 1278 aa17.2■□□□□ 0.34
HLA-DOA-205ENST00000490305 MCM10Q7L590 875 aa17.2■□□□□ 0.34
HLA-DOA-205ENST00000490305 THUMPD2Q9BTF0 503 aaKnown RBP17.2■□□□□ 0.34
HLA-DOA-205ENST00000490305 MEGF6O75095 1541 aa17.2■□□□□ 0.34
HLA-DOA-205ENST00000490305 NRAPQ86VF7 1730 aa17.19■□□□□ 0.34
HLA-DOA-205ENST00000490305 LRRC37A3O60309 1634 aa17.19■□□□□ 0.34
HLA-DOA-205ENST00000490305 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
HLA-DOA-205ENST00000490305 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
HLA-DOA-205ENST00000490305 IL2RBP14784 551 aa17.18■□□□□ 0.34
HLA-DOA-205ENST00000490305 BABAM1Q9NWV8 329 aa17.18■□□□□ 0.34
HLA-DOA-205ENST00000490305 SLIT2O94813 1529 aa17.17■□□□□ 0.34
HLA-DOA-205ENST00000490305 VIRMAQ69YN4 1812 aaKnown RBP17.17■□□□□ 0.34
HLA-DOA-205ENST00000490305 TSR2Q969E8 191 aaKnown RBP17.17■□□□□ 0.34
HLA-DOA-205ENST00000490305 RNF123Q5XPI4 1314 aa17.17■□□□□ 0.34
HLA-DOA-205ENST00000490305 CHL1O00533 1208 aa17.16■□□□□ 0.34
HLA-DOA-205ENST00000490305 IFNL2Q8IZJ0 200 aa17.16■□□□□ 0.34
HLA-DOA-205ENST00000490305 IL17REQ8NFR9 667 aa17.16■□□□□ 0.34
HLA-DOA-205ENST00000490305 GTF3C3Q9Y5Q9 886 aa17.16■□□□□ 0.34
HLA-DOA-205ENST00000490305 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
HLA-DOA-205ENST00000490305 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
HLA-DOA-205ENST00000490305 MBIPQ9NS73 344 aa17.15■□□□□ 0.34
HLA-DOA-205ENST00000490305 THRAP3Q9Y2W1 955 aaKnown RBP17.15■□□□□ 0.34
HLA-DOA-205ENST00000490305 ADAMTS7Q9UKP4 1686 aa17.14■□□□□ 0.33
HLA-DOA-205ENST00000490305 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
HLA-DOA-205ENST00000490305 ZCRB1Q8TBF4 217 aaKnown RBP17.14■□□□□ 0.33
HLA-DOA-205ENST00000490305 CDCA7Q9BWT1 371 aaPredicted RBP17.14■□□□□ 0.33
HLA-DOA-205ENST00000490305 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
HLA-DOA-205ENST00000490305 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
HLA-DOA-205ENST00000490305 WNK3Q9BYP7 1800 aa17.14■□□□□ 0.33
HLA-DOA-205ENST00000490305 RNMTO43148 476 aaKnown RBP17.13■□□□□ 0.33
HLA-DOA-205ENST00000490305 PHKG2P15735 406 aa17.13■□□□□ 0.33
HLA-DOA-205ENST00000490305 TAF7Q15545 349 aaPredicted RBP17.13■□□□□ 0.33
HLA-DOA-205ENST00000490305 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.13■□□□□ 0.33
HLA-DOA-205ENST00000490305 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
HLA-DOA-205ENST00000490305 NGLY1Q96IV0 654 aa17.13■□□□□ 0.33
HLA-DOA-205ENST00000490305 SCN11AQ9UI33 1791 aa17.12■□□□□ 0.33
HLA-DOA-205ENST00000490305 LRP6O75581 1613 aa17.12■□□□□ 0.33
HLA-DOA-205ENST00000490305 RRP1P56182 461 aaKnown RBP17.12■□□□□ 0.33
HLA-DOA-205ENST00000490305 TEFQ10587 303 aa17.12■□□□□ 0.33
HLA-DOA-205ENST00000490305 MEX3CQ5U5Q3 659 aaKnown RBP17.12■□□□□ 0.33
HLA-DOA-205ENST00000490305 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
HLA-DOA-205ENST00000490305 C8orf37Q96NL8 207 aa17.12■□□□□ 0.33
HLA-DOA-205ENST00000490305 TSPYL4Q9UJ04 414 aa17.12■□□□□ 0.33
HLA-DOA-205ENST00000490305 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.12■□□□□ 0.33
HLA-DOA-205ENST00000490305 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
HLA-DOA-205ENST00000490305 FNBP4Q8N3X1 1017 aaPredicted RBP17.11■□□□□ 0.33
HLA-DOA-205ENST00000490305 USP35Q9P2H5 1018 aa17.11■□□□□ 0.33
HLA-DOA-205ENST00000490305 SPATA31A1Q5TZJ5 1347 aa17.11■□□□□ 0.33
HLA-DOA-205ENST00000490305 DISP2A7MBM2 1401 aa17.11■□□□□ 0.33
HLA-DOA-205ENST00000490305 DCAF5Q96JK2 942 aa17.1■□□□□ 0.33
HLA-DOA-205ENST00000490305 LGR6Q9HBX8 967 aa17.1■□□□□ 0.33
HLA-DOA-205ENST00000490305 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
HLA-DOA-205ENST00000490305 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
HLA-DOA-205ENST00000490305 CYP27B1O15528 508 aa17.09■□□□□ 0.33
HLA-DOA-205ENST00000490305 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
HLA-DOA-205ENST00000490305 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
HLA-DOA-205ENST00000490305 SIPA1L3O60292 1781 aaPredicted RBP17.08■□□□□ 0.33
HLA-DOA-205ENST00000490305 SOS1Q07889 1333 aaPredicted RBP17.08■□□□□ 0.32
HLA-DOA-205ENST00000490305 FKBP8Q14318 412 aa17.08■□□□□ 0.32
HLA-DOA-205ENST00000490305 VPS72Q15906 364 aa17.08■□□□□ 0.32
HLA-DOA-205ENST00000490305 ALDH1L2Q3SY69 923 aa17.08■□□□□ 0.32
HLA-DOA-205ENST00000490305 ERICH6BQ5W0A0 696 aa17.08■□□□□ 0.32
HLA-DOA-205ENST00000490305 BARGINQ6ZT62 677 aa17.08■□□□□ 0.32
HLA-DOA-205ENST00000490305 BCL9LQ86UU0 1499 aa17.07■□□□□ 0.32
HLA-DOA-205ENST00000490305 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
HLA-DOA-205ENST00000490305 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
HLA-DOA-205ENST00000490305 CCDC9Q9Y3X0 531 aaKnown RBP17.07■□□□□ 0.32
HLA-DOA-205ENST00000490305 KDM3BQ7LBC6 1761 aa17.07■□□□□ 0.32
HLA-DOA-205ENST00000490305 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
HLA-DOA-205ENST00000490305 EXOC5O00471 708 aa17.06■□□□□ 0.32
HLA-DOA-205ENST00000490305 VAMP4O75379 141 aa17.06■□□□□ 0.32
HLA-DOA-205ENST00000490305 USP21Q9UK80 565 aa17.06■□□□□ 0.32
HLA-DOA-205ENST00000490305 MRC1P22897 1456 aa17.05■□□□□ 0.32
HLA-DOA-205ENST00000490305 BTBD11A6QL63 1104 aa17.05■□□□□ 0.32
HLA-DOA-205ENST00000490305 SLC52A2Q9HAB3 445 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms