RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 KIF7Q2M1P5 1343 aa23.89■■□□□ 1.42
SEC13-218ENST00000490283 POLKQ9UBT6 870 aa23.89■■□□□ 1.41
SEC13-218ENST00000490283 MORC1Q86VD1 984 aa23.88■■□□□ 1.41
SEC13-218ENST00000490283 TXNRD1Q16881 649 aa23.87■■□□□ 1.41
SEC13-218ENST00000490283 RGPD2P0DJD1 1756 aa23.87■■□□□ 1.41
SEC13-218ENST00000490283 ANKRD26Q9UPS8 1709 aa23.87■■□□□ 1.41
SEC13-218ENST00000490283 LRP5O75197 1615 aa23.86■■□□□ 1.41
SEC13-218ENST00000490283 SYTL4Q96C24 671 aaPredicted RBP23.86■■□□□ 1.41
SEC13-218ENST00000490283 PCDH11XQ9BZA7 1347 aa23.84■■□□□ 1.41
SEC13-218ENST00000490283 PCDH11YQ9BZA8 1340 aa23.84■■□□□ 1.41
SEC13-218ENST00000490283 PROM2Q8N271 834 aa23.83■■□□□ 1.41
SEC13-218ENST00000490283 STK32BQ9NY57 414 aa23.83■■□□□ 1.41
SEC13-218ENST00000490283 MAP2P11137 1827 aaKnown RBP23.8■■□□□ 1.4
SEC13-218ENST00000490283 PRIM1P49642 420 aaKnown RBP23.8■■□□□ 1.4
SEC13-218ENST00000490283 EYA1Q99502 592 aa23.8■■□□□ 1.4
SEC13-218ENST00000490283 ANO8Q9HCE9 1232 aaPredicted RBP23.8■■□□□ 1.4
SEC13-218ENST00000490283 EIF4A2Q14240 407 aaKnown RBP23.79■■□□□ 1.4
SEC13-218ENST00000490283 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
SEC13-218ENST00000490283 SRCAPQ6ZRS2 3230 aa23.79■■□□□ 1.4
SEC13-218ENST00000490283 KAT6BQ8WYB5 2073 aa23.78■■□□□ 1.4
SEC13-218ENST00000490283 BTAF1O14981 1849 aa23.77■■□□□ 1.4
SEC13-218ENST00000490283 NCAPD2Q15021 1401 aa23.77■■□□□ 1.4
SEC13-218ENST00000490283 SLC15A2Q16348 729 aa23.76■■□□□ 1.39
SEC13-218ENST00000490283 AMER1Q5JTC6 1135 aaPredicted RBP23.76■■□□□ 1.39
SEC13-218ENST00000490283 SLC27A3Q5K4L6 730 aa23.76■■□□□ 1.39
SEC13-218ENST00000490283 SPON1Q9HCB6 807 aa23.76■■□□□ 1.39
SEC13-218ENST00000490283 SHANK3Q9BYB0 1731 aa23.76■■□□□ 1.39
SEC13-218ENST00000490283 DOT1LQ8TEK3 1739 aa23.75■■□□□ 1.39
SEC13-218ENST00000490283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.74■■□□□ 1.39
SEC13-218ENST00000490283 CYP27B1O15528 508 aa23.73■■□□□ 1.39
SEC13-218ENST00000490283 PPP1R1BQ9UD71 204 aaPredicted RBP23.72■■□□□ 1.39
SEC13-218ENST00000490283 PLEKHG2Q9H7P9 1386 aa23.71■■□□□ 1.39
SEC13-218ENST00000490283 IGSF1Q8N6C5 1336 aa23.71■■□□□ 1.39
SEC13-218ENST00000490283 PER1O15534 1290 aaPredicted RBP23.69■■□□□ 1.38
SEC13-218ENST00000490283 CC2D1BQ5T0F9 858 aaKnown RBP23.69■■□□□ 1.38
SEC13-218ENST00000490283 LRRC4BQ9NT99 713 aa23.69■■□□□ 1.38
SEC13-218ENST00000490283 PKD1L3Q7Z443 1732 aa23.69■■□□□ 1.38
SEC13-218ENST00000490283 HMGB2P26583 209 aaKnown RBP23.68■■□□□ 1.38
SEC13-218ENST00000490283 MPRIPQ6WCQ1 1025 aa23.68■■□□□ 1.38
SEC13-218ENST00000490283 IFNL2Q8IZJ0 200 aa23.68■■□□□ 1.38
SEC13-218ENST00000490283 CCNL1Q9UK58 526 aaPredicted RBP23.68■■□□□ 1.38
SEC13-218ENST00000490283 NKX1-1Q15270 411 aaPredicted RBP23.66■■□□□ 1.38
SEC13-218ENST00000490283 PLEKHO1Q53GL0 409 aaPredicted RBP23.66■■□□□ 1.38
SEC13-218ENST00000490283 ZBTB7AO95365 584 aa23.65■■□□□ 1.38
SEC13-218ENST00000490283 SMARCC1Q92922 1105 aaPredicted RBP23.65■■□□□ 1.38
SEC13-218ENST00000490283 PAPPAQ13219 1627 aa23.65■■□□□ 1.38
SEC13-218ENST00000490283 NPC1L1Q9UHC9 1359 aa23.65■■□□□ 1.38
SEC13-218ENST00000490283 PHKG2P15735 406 aa23.64■■□□□ 1.37
SEC13-218ENST00000490283 MTHFSP49914 203 aa23.64■■□□□ 1.37
SEC13-218ENST00000490283 AMOTQ4VCS5 1084 aa23.64■■□□□ 1.37
SEC13-218ENST00000490283 CASZ1Q86V15 1759 aa23.63■■□□□ 1.37
SEC13-218ENST00000490283 CNGB1Q14028 1251 aaPredicted RBP23.63■■□□□ 1.37
SEC13-218ENST00000490283 ZNF827Q17R98 1081 aa23.63■■□□□ 1.37
SEC13-218ENST00000490283 PDGFDQ9GZP0 370 aaPredicted RBP23.63■■□□□ 1.37
SEC13-218ENST00000490283 PALLDQ8WX93 1383 aa23.63■■□□□ 1.37
SEC13-218ENST00000490283 HSP90AB1P08238 724 aaKnown RBP23.62■■□□□ 1.37
SEC13-218ENST00000490283 KCNQ4P56696 695 aa23.62■■□□□ 1.37
SEC13-218ENST00000490283 AKT1S1Q96B36 256 aa23.62■■□□□ 1.37
SEC13-218ENST00000490283 MTFR1LQ9H019 292 aa23.62■■□□□ 1.37
SEC13-218ENST00000490283 TMOD3Q9NYL9 352 aa23.62■■□□□ 1.37
SEC13-218ENST00000490283 TFCP2L1Q9NZI6 479 aa23.62■■□□□ 1.37
SEC13-218ENST00000490283 IL13P35225 146 aa23.61■■□□□ 1.37
SEC13-218ENST00000490283 SULT6B1Q6IMI4 303 aa23.61■■□□□ 1.37
SEC13-218ENST00000490283 ZNF530Q6P9A1 599 aaPredicted RBP23.6■■□□□ 1.37
SEC13-218ENST00000490283 ATF5Q9Y2D1 282 aaPredicted RBP23.6■■□□□ 1.37
SEC13-218ENST00000490283 C1orf141Q5JVX7 400 aa23.59■■□□□ 1.37
SEC13-218ENST00000490283 AEBP1Q8IUX7 1158 aa23.59■■□□□ 1.37
SEC13-218ENST00000490283 PIGBQ92521 554 aa23.59■■□□□ 1.37
SEC13-218ENST00000490283 LY75O60449 1722 aa23.59■■□□□ 1.37
SEC13-218ENST00000490283 DIAPH1O60610 1272 aaKnown RBP23.57■■□□□ 1.36
SEC13-218ENST00000490283 DCAF5Q96JK2 942 aa23.57■■□□□ 1.36
SEC13-218ENST00000490283 TOGARAM1Q9Y4F4 1720 aa23.56■■□□□ 1.36
SEC13-218ENST00000490283 KDRP35968 1356 aa23.56■■□□□ 1.36
SEC13-218ENST00000490283 SLC16A10Q8TF71 515 aa23.56■■□□□ 1.36
SEC13-218ENST00000490283 ERVV-2B6SEH9 535 aa23.54■■□□□ 1.36
SEC13-218ENST00000490283 PNPLA7Q6ZV29 1317 aa23.54■■□□□ 1.36
SEC13-218ENST00000490283 DCAF8L1A6NGE4 600 aa23.53■■□□□ 1.36
SEC13-218ENST00000490283 MSH5O43196 834 aa23.53■■□□□ 1.36
SEC13-218ENST00000490283 PTGER2P43116 358 aa23.53■■□□□ 1.36
SEC13-218ENST00000490283 ITGB4P16144 1822 aa23.52■■□□□ 1.36
SEC13-218ENST00000490283 HMOX1P09601 288 aa23.51■■□□□ 1.35
SEC13-218ENST00000490283 POLD1P28340 1107 aa23.51■■□□□ 1.35
SEC13-218ENST00000490283 CABP4P57796 275 aa23.51■■□□□ 1.35
SEC13-218ENST00000490283 AK7Q96M32 723 aa23.51■■□□□ 1.35
SEC13-218ENST00000490283 CFAP53Q96M91 514 aa23.51■■□□□ 1.35
SEC13-218ENST00000490283 LOC102724428A0A0B4J2F2 783 aa23.5■■□□□ 1.35
SEC13-218ENST00000490283 SIK1P57059 783 aa23.5■■□□□ 1.35
SEC13-218ENST00000490283 FLAD1Q8NFF5 587 aa23.5■■□□□ 1.35
SEC13-218ENST00000490283 ASAP1Q9ULH1 1129 aa23.5■■□□□ 1.35
SEC13-218ENST00000490283 QSER1Q2KHR3 1735 aa23.49■■□□□ 1.35
SEC13-218ENST00000490283 U2SURPO15042 1029 aaKnown RBP23.48■■□□□ 1.35
SEC13-218ENST00000490283 ARXQ96QS3 562 aa23.48■■□□□ 1.35
SEC13-218ENST00000490283 C5P01031 1676 aa23.48■■□□□ 1.35
SEC13-218ENST00000490283 ATP6V1AP38606 617 aa23.47■■□□□ 1.35
SEC13-218ENST00000490283 AKAP4Q5JQC9 854 aa23.47■■□□□ 1.35
SEC13-218ENST00000490283 ATG3Q9NT62 314 aa23.47■■□□□ 1.35
SEC13-218ENST00000490283 KDM6AO15550 1401 aaPredicted RBP23.47■■□□□ 1.35
SEC13-218ENST00000490283 SGIP1Q9BQI5 828 aa23.46■■□□□ 1.35
SEC13-218ENST00000490283 COL23A1Q86Y22 540 aaPredicted RBP23.44■■□□□ 1.34
SEC13-218ENST00000490283 RBM42Q9BTD8 480 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms