RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 KIF24Q5T7B8 1368 aa27■■□□□ 1.91
TNFRSF1B-202ENST00000489921 FLT4P35916 1363 aa26.99■■□□□ 1.91
TNFRSF1B-202ENST00000489921 ANKRD26Q9UPS8 1709 aa26.99■■□□□ 1.91
TNFRSF1B-202ENST00000489921 NSD2O96028 1365 aa26.97■■□□□ 1.91
TNFRSF1B-202ENST00000489921 ZBTB7AO95365 584 aa26.97■■□□□ 1.91
TNFRSF1B-202ENST00000489921 PTGER2P43116 358 aa26.97■■□□□ 1.91
TNFRSF1B-202ENST00000489921 EMILIN1Q9Y6C2 1016 aa26.97■■□□□ 1.91
TNFRSF1B-202ENST00000489921 MAP2P11137 1827 aaKnown RBP26.97■■□□□ 1.91
TNFRSF1B-202ENST00000489921 PRIM1P49642 420 aaKnown RBP26.96■■□□□ 1.91
TNFRSF1B-202ENST00000489921 SMG6Q86US8 1419 aaKnown RBP26.95■■□□□ 1.9
TNFRSF1B-202ENST00000489921 LY75O60449 1722 aa26.95■■□□□ 1.9
TNFRSF1B-202ENST00000489921 HSPA5P11021 654 aaKnown RBP26.94■■□□□ 1.9
TNFRSF1B-202ENST00000489921 ZNF827Q17R98 1081 aa26.94■■□□□ 1.9
TNFRSF1B-202ENST00000489921 PPP1R1BQ9UD71 204 aaPredicted RBP26.94■■□□□ 1.9
TNFRSF1B-202ENST00000489921 CGNL1Q0VF96 1302 aa26.93■■□□□ 1.9
TNFRSF1B-202ENST00000489921 ATF5Q9Y2D1 282 aaPredicted RBP26.93■■□□□ 1.9
TNFRSF1B-202ENST00000489921 NCAPD2Q15021 1401 aa26.91■■□□□ 1.9
TNFRSF1B-202ENST00000489921 EIF4G2P78344 907 aaKnown RBP eCLIP26.91■■□□□ 1.9
TNFRSF1B-202ENST00000489921 CCER1Q8TC90 406 aaPredicted RBP26.91■■□□□ 1.9
TNFRSF1B-202ENST00000489921 AKT1S1Q96B36 256 aa26.91■■□□□ 1.9
TNFRSF1B-202ENST00000489921 SGIP1Q9BQI5 828 aa26.91■■□□□ 1.9
TNFRSF1B-202ENST00000489921 RAPGEF4Q8WZA2 1011 aa26.9■■□□□ 1.9
TNFRSF1B-202ENST00000489921 SYTL4Q96C24 671 aaPredicted RBP26.9■■□□□ 1.9
TNFRSF1B-202ENST00000489921 QSER1Q2KHR3 1735 aa26.9■■□□□ 1.9
TNFRSF1B-202ENST00000489921 SLC27A3Q5K4L6 730 aa26.89■■□□□ 1.9
TNFRSF1B-202ENST00000489921 UTRNP46939 3433 aa26.89■■□□□ 1.89
TNFRSF1B-202ENST00000489921 TATP17735 454 aaPredicted RBP26.88■■□□□ 1.89
TNFRSF1B-202ENST00000489921 KCNQ4P56696 695 aa26.88■■□□□ 1.89
TNFRSF1B-202ENST00000489921 MTFR1LQ9H019 292 aa26.88■■□□□ 1.89
TNFRSF1B-202ENST00000489921 POLKQ9UBT6 870 aa26.88■■□□□ 1.89
TNFRSF1B-202ENST00000489921 TUBGCP6Q96RT7 1819 aa26.88■■□□□ 1.89
TNFRSF1B-202ENST00000489921 WASHC2AQ641Q2 1341 aa26.88■■□□□ 1.89
TNFRSF1B-202ENST00000489921 PKD1L3Q7Z443 1732 aa26.87■■□□□ 1.89
TNFRSF1B-202ENST00000489921 POLR3GLQ9BT43 218 aa26.87■■□□□ 1.89
TNFRSF1B-202ENST00000489921 PPM1GO15355 546 aaPredicted RBP26.85■■□□□ 1.89
TNFRSF1B-202ENST00000489921 CYP27B1O15528 508 aa26.85■■□□□ 1.89
TNFRSF1B-202ENST00000489921 TOGARAM1Q9Y4F4 1720 aa26.85■■□□□ 1.89
TNFRSF1B-202ENST00000489921 COL24A1Q17RW2 1714 aa26.83■■□□□ 1.89
TNFRSF1B-202ENST00000489921 PCDH11XQ9BZA7 1347 aa26.83■■□□□ 1.89
TNFRSF1B-202ENST00000489921 PCDH11YQ9BZA8 1340 aa26.83■■□□□ 1.89
TNFRSF1B-202ENST00000489921 ITGB4P16144 1822 aa26.82■■□□□ 1.88
TNFRSF1B-202ENST00000489921 EYA1Q99502 592 aa26.82■■□□□ 1.88
TNFRSF1B-202ENST00000489921 PANK3Q9H999 370 aa26.82■■□□□ 1.88
TNFRSF1B-202ENST00000489921 PNPLA7Q6ZV29 1317 aa26.8■■□□□ 1.88
TNFRSF1B-202ENST00000489921 TNNT2P45379 298 aaPredicted RBP26.78■■□□□ 1.88
TNFRSF1B-202ENST00000489921 FHDC1Q9C0D6 1143 aaPredicted RBP26.78■■□□□ 1.88
TNFRSF1B-202ENST00000489921 NKX1-1Q15270 411 aaPredicted RBP26.77■■□□□ 1.88
TNFRSF1B-202ENST00000489921 SYT17Q9BSW7 474 aa26.77■■□□□ 1.88
TNFRSF1B-202ENST00000489921 CCNL1Q9UK58 526 aaPredicted RBP26.77■■□□□ 1.88
TNFRSF1B-202ENST00000489921 EIF4A2Q14240 407 aaKnown RBP26.76■■□□□ 1.87
TNFRSF1B-202ENST00000489921 TAF1LQ8IZX4 1826 aa26.76■■□□□ 1.87
TNFRSF1B-202ENST00000489921 C5P01031 1676 aa26.74■■□□□ 1.87
TNFRSF1B-202ENST00000489921 SLC16A10Q8TF71 515 aa26.74■■□□□ 1.87
TNFRSF1B-202ENST00000489921 ARXQ96QS3 562 aa26.74■■□□□ 1.87
TNFRSF1B-202ENST00000489921 TFCP2L1Q9NZI6 479 aa26.74■■□□□ 1.87
TNFRSF1B-202ENST00000489921 MPRIPQ6WCQ1 1025 aa26.73■■□□□ 1.87
TNFRSF1B-202ENST00000489921 GOLGB1Q14789 3259 aaKnown RBP26.73■■□□□ 1.87
TNFRSF1B-202ENST00000489921 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.72■■□□□ 1.87
TNFRSF1B-202ENST00000489921 SPG7Q9UQ90 795 aa26.71■■□□□ 1.87
TNFRSF1B-202ENST00000489921 PALLDQ8WX93 1383 aa26.71■■□□□ 1.87
TNFRSF1B-202ENST00000489921 PIGBQ92521 554 aa26.7■■□□□ 1.86
TNFRSF1B-202ENST00000489921 MAP3K5Q99683 1374 aa26.7■■□□□ 1.86
TNFRSF1B-202ENST00000489921 IGSF1Q8N6C5 1336 aa26.68■■□□□ 1.86
TNFRSF1B-202ENST00000489921 YY1P25490 414 aa26.68■■□□□ 1.86
TNFRSF1B-202ENST00000489921 COL23A1Q86Y22 540 aaPredicted RBP26.68■■□□□ 1.86
TNFRSF1B-202ENST00000489921 DCAF8L1A6NGE4 600 aa26.66■■□□□ 1.86
TNFRSF1B-202ENST00000489921 PHKG2P15735 406 aa26.66■■□□□ 1.86
TNFRSF1B-202ENST00000489921 PLEKHG2Q9H7P9 1386 aa26.64■■□□□ 1.86
TNFRSF1B-202ENST00000489921 C4BP0C0L5 1744 aa26.64■■□□□ 1.85
TNFRSF1B-202ENST00000489921 KIF7Q2M1P5 1343 aa26.64■■□□□ 1.85
TNFRSF1B-202ENST00000489921 MORC1Q86VD1 984 aa26.63■■□□□ 1.85
TNFRSF1B-202ENST00000489921 IFNL2Q8IZJ0 200 aa26.63■■□□□ 1.85
TNFRSF1B-202ENST00000489921 AMER1Q5JTC6 1135 aaPredicted RBP26.62■■□□□ 1.85
TNFRSF1B-202ENST00000489921 AMIGO3Q86WK7 504 aa26.62■■□□□ 1.85
TNFRSF1B-202ENST00000489921 SMARCC1Q92922 1105 aaPredicted RBP26.62■■□□□ 1.85
TNFRSF1B-202ENST00000489921 UBR3Q6ZT12 1888 aa26.61■■□□□ 1.85
TNFRSF1B-202ENST00000489921 POLD1P28340 1107 aa26.6■■□□□ 1.85
TNFRSF1B-202ENST00000489921 KNSTRNQ9Y448 316 aa26.6■■□□□ 1.85
TNFRSF1B-202ENST00000489921 ASAP1Q9ULH1 1129 aa26.59■■□□□ 1.85
TNFRSF1B-202ENST00000489921 TMOD3Q9NYL9 352 aa26.58■■□□□ 1.85
TNFRSF1B-202ENST00000489921 LOC102724428A0A0B4J2F2 783 aa26.56■■□□□ 1.84
TNFRSF1B-202ENST00000489921 PER1O15534 1290 aaPredicted RBP26.56■■□□□ 1.84
TNFRSF1B-202ENST00000489921 MSH5O43196 834 aa26.56■■□□□ 1.84
TNFRSF1B-202ENST00000489921 SIK1P57059 783 aa26.56■■□□□ 1.84
TNFRSF1B-202ENST00000489921 SMIM5Q71RC9 77 aa26.56■■□□□ 1.84
TNFRSF1B-202ENST00000489921 AEBP1Q8IUX7 1158 aa26.56■■□□□ 1.84
TNFRSF1B-202ENST00000489921 ATG3Q9NT62 314 aa26.56■■□□□ 1.84
TNFRSF1B-202ENST00000489921 CHD4Q14839 1912 aa26.55■■□□□ 1.84
TNFRSF1B-202ENST00000489921 LINC00116Q8NCU8 138 aa26.55■■□□□ 1.84
TNFRSF1B-202ENST00000489921 HMGB2P26583 209 aaKnown RBP26.54■■□□□ 1.84
TNFRSF1B-202ENST00000489921 IL13P35225 146 aa26.54■■□□□ 1.84
TNFRSF1B-202ENST00000489921 ITPK1Q13572 414 aa26.54■■□□□ 1.84
TNFRSF1B-202ENST00000489921 MSL1Q68DK7 614 aa26.54■■□□□ 1.84
TNFRSF1B-202ENST00000489921 NLGN2Q8NFZ4 835 aa26.54■■□□□ 1.84
TNFRSF1B-202ENST00000489921 FLAD1Q8NFF5 587 aa26.53■■□□□ 1.84
TNFRSF1B-202ENST00000489921 KDM6AO15550 1401 aaPredicted RBP26.52■■□□□ 1.84
TNFRSF1B-202ENST00000489921 KDRP35968 1356 aa26.52■■□□□ 1.84
TNFRSF1B-202ENST00000489921 PLEKHO1Q53GL0 409 aaPredicted RBP26.52■■□□□ 1.84
TNFRSF1B-202ENST00000489921 ERVV-2B6SEH9 535 aa26.51■■□□□ 1.83
TNFRSF1B-202ENST00000489921 KLHL34Q8N239 644 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms