RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 HSPA1AP0DMV8 641 aaKnown RBP21.46■■□□□ 1.03
SDHAF3-204ENST00000489852 HSPA1BP0DMV9 641 aaKnown RBP21.46■■□□□ 1.03
SDHAF3-204ENST00000489852 DDX54Q8TDD1 881 aaKnown RBP21.46■■□□□ 1.03
SDHAF3-204ENST00000489852 PRIM1P49642 420 aaKnown RBP21.45■■□□□ 1.02
SDHAF3-204ENST00000489852 CICQ96RK0 1608 aaPredicted RBP21.44■■□□□ 1.02
SDHAF3-204ENST00000489852 STAC3Q96MF2 364 aa21.43■■□□□ 1.02
SDHAF3-204ENST00000489852 ERBB3P21860 1342 aa21.43■■□□□ 1.02
SDHAF3-204ENST00000489852 FLAD1Q8NFF5 587 aa21.42■■□□□ 1.02
SDHAF3-204ENST00000489852 QRICH2Q9H0J4 1663 aa21.41■■□□□ 1.02
SDHAF3-204ENST00000489852 NFAT5O94916 1531 aa21.41■■□□□ 1.02
SDHAF3-204ENST00000489852 ANKRD36BQ8N2N9 1353 aa21.41■■□□□ 1.02
SDHAF3-204ENST00000489852 TTC21BQ7Z4L5 1316 aa21.39■■□□□ 1.01
SDHAF3-204ENST00000489852 NSD2O96028 1365 aa21.38■■□□□ 1.01
SDHAF3-204ENST00000489852 USP47Q96K76 1375 aa21.36■■□□□ 1.01
SDHAF3-204ENST00000489852 DOT1LQ8TEK3 1739 aa21.35■■□□□ 1.01
SDHAF3-204ENST00000489852 ANKRD24Q8TF21 1146 aa21.35■■□□□ 1.01
SDHAF3-204ENST00000489852 ARHGAP27Q6ZUM4 889 aa21.34■■□□□ 1.01
SDHAF3-204ENST00000489852 TTC21AQ8NDW8 1320 aa21.33■■□□□ 1.01
SDHAF3-204ENST00000489852 ZNF692Q9BU19 519 aaPredicted RBP21.33■■□□□ 1.01
SDHAF3-204ENST00000489852 C5P01031 1676 aa21.32■■□□□ 1
SDHAF3-204ENST00000489852 HMGB2P26583 209 aaKnown RBP21.32■■□□□ 1
SDHAF3-204ENST00000489852 BCS1LQ9Y276 419 aa21.32■■□□□ 1
SDHAF3-204ENST00000489852 CENPJQ9HC77 1338 aaPredicted RBP21.31■■□□□ 1
SDHAF3-204ENST00000489852 SMC1BQ8NDV3 1235 aa21.31■■□□□ 1
SDHAF3-204ENST00000489852 USP54Q70EL1 1684 aa21.3■■□□□ 1
SDHAF3-204ENST00000489852 KDM2BQ8NHM5 1336 aa21.29■■□□□ 1
SDHAF3-204ENST00000489852 PLEKHG2Q9H7P9 1386 aa21.29■■□□□ 1
SDHAF3-204ENST00000489852 RRAGCQ9HB90 399 aa21.29■■□□□ 1
SDHAF3-204ENST00000489852 C9orf131Q5VYM1 1079 aa21.28■■□□□ 1
SDHAF3-204ENST00000489852 KCPQ6ZWJ8 1503 aa21.27■■□□□ 1
SDHAF3-204ENST00000489852 PHF14O94880 888 aa21.26■□□□□ 0.99
SDHAF3-204ENST00000489852 AK7Q96M32 723 aa21.26■□□□□ 0.99
SDHAF3-204ENST00000489852 C10orf71Q711Q0 1435 aa21.26■□□□□ 0.99
SDHAF3-204ENST00000489852 PXDNLA1KZ92 1463 aa21.26■□□□□ 0.99
SDHAF3-204ENST00000489852 LTN1O94822 1766 aa21.25■□□□□ 0.99
SDHAF3-204ENST00000489852 FAM161AQ3B820 660 aa21.25■□□□□ 0.99
SDHAF3-204ENST00000489852 AMIGO3Q86WK7 504 aa21.25■□□□□ 0.99
SDHAF3-204ENST00000489852 TAF1LQ8IZX4 1826 aa21.25■□□□□ 0.99
SDHAF3-204ENST00000489852 TGFB2P61812 414 aa21.24■□□□□ 0.99
SDHAF3-204ENST00000489852 SMIM5Q71RC9 77 aa21.24■□□□□ 0.99
SDHAF3-204ENST00000489852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.23■□□□□ 0.99
SDHAF3-204ENST00000489852 A0A0G2JLW4 131 aa21.23■□□□□ 0.99
SDHAF3-204ENST00000489852 NBPF1Q3BBV0 1214 aa21.23■□□□□ 0.99
SDHAF3-204ENST00000489852 ZCRB1Q8TBF4 217 aaKnown RBP21.23■□□□□ 0.99
SDHAF3-204ENST00000489852 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
SDHAF3-204ENST00000489852 FCHSD2O94868 740 aa21.22■□□□□ 0.99
SDHAF3-204ENST00000489852 C4BP0C0L5 1744 aa21.21■□□□□ 0.99
SDHAF3-204ENST00000489852 KIAA1210Q9ULL0 1709 aa21.21■□□□□ 0.99
SDHAF3-204ENST00000489852 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
SDHAF3-204ENST00000489852 TOGARAM1Q9Y4F4 1720 aa21.21■□□□□ 0.99
SDHAF3-204ENST00000489852 TNRC6CQ9HCJ0 1690 aaKnown RBP21.2■□□□□ 0.98
SDHAF3-204ENST00000489852 PALLDQ8WX93 1383 aa21.2■□□□□ 0.98
SDHAF3-204ENST00000489852 NSD3Q9BZ95 1437 aa21.2■□□□□ 0.98
SDHAF3-204ENST00000489852 PKD1L3Q7Z443 1732 aa21.19■□□□□ 0.98
SDHAF3-204ENST00000489852 KIAA1551Q9HCM1 1747 aa21.19■□□□□ 0.98
SDHAF3-204ENST00000489852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.19■□□□□ 0.98
SDHAF3-204ENST00000489852 LTV1Q96GA3 475 aaPredicted RBP21.19■□□□□ 0.98
SDHAF3-204ENST00000489852 EVC2Q86UK5 1308 aa21.19■□□□□ 0.98
SDHAF3-204ENST00000489852 USP31Q70CQ4 1352 aa21.19■□□□□ 0.98
SDHAF3-204ENST00000489852 UBR3Q6ZT12 1888 aa21.18■□□□□ 0.98
SDHAF3-204ENST00000489852 MMP10P09238 476 aa21.18■□□□□ 0.98
SDHAF3-204ENST00000489852 SSFA2P28290 1259 aa21.18■□□□□ 0.98
SDHAF3-204ENST00000489852 PRDM10Q9NQV6 1147 aa21.18■□□□□ 0.98
SDHAF3-204ENST00000489852 KIF13BQ9NQT8 1826 aa21.18■□□□□ 0.98
SDHAF3-204ENST00000489852 RNF181Q9P0P0 153 aa21.17■□□□□ 0.98
SDHAF3-204ENST00000489852 FAM208AQ9UK61 1670 aaKnown RBP21.15■□□□□ 0.98
SDHAF3-204ENST00000489852 FOXN1O15353 648 aa21.15■□□□□ 0.98
SDHAF3-204ENST00000489852 DPEP1P16444 411 aa21.15■□□□□ 0.98
SDHAF3-204ENST00000489852 NME9Q86XW9 330 aa21.14■□□□□ 0.97
SDHAF3-204ENST00000489852 IP6K1Q92551 441 aa21.14■□□□□ 0.97
SDHAF3-204ENST00000489852 MPRIPQ6WCQ1 1025 aa21.12■□□□□ 0.97
SDHAF3-204ENST00000489852 MEGF6O75095 1541 aa21.11■□□□□ 0.97
SDHAF3-204ENST00000489852 SMARCC1Q92922 1105 aaPredicted RBP21.11■□□□□ 0.97
SDHAF3-204ENST00000489852 BRCA1P38398 1863 aaKnown RBP21.1■□□□□ 0.97
SDHAF3-204ENST00000489852 VEGFAP15692 232 aaPredicted RBP21.1■□□□□ 0.97
SDHAF3-204ENST00000489852 MLLT1Q03111 559 aaPredicted RBP21.1■□□□□ 0.97
SDHAF3-204ENST00000489852 ARFGEF1Q9Y6D6 1849 aa21.09■□□□□ 0.97
SDHAF3-204ENST00000489852 MKRN1Q9UHC7 482 aaKnown RBP21.09■□□□□ 0.97
SDHAF3-204ENST00000489852 MON2Q7Z3U7 1717 aa21.09■□□□□ 0.97
SDHAF3-204ENST00000489852 CTCFP49711 727 aaPredicted RBP21.08■□□□□ 0.97
SDHAF3-204ENST00000489852 ABHD8Q96I13 439 aa21.08■□□□□ 0.97
SDHAF3-204ENST00000489852 CCDC87Q9NVE4 849 aa21.08■□□□□ 0.97
SDHAF3-204ENST00000489852 GNPATO15228 680 aa21.07■□□□□ 0.96
SDHAF3-204ENST00000489852 KCNA3P22001 575 aa21.07■□□□□ 0.96
SDHAF3-204ENST00000489852 DCAF5Q96JK2 942 aa21.07■□□□□ 0.96
SDHAF3-204ENST00000489852 LINC00116Q8NCU8 138 aa21.06■□□□□ 0.96
SDHAF3-204ENST00000489852 AIDAQ96BJ3 306 aa21.06■□□□□ 0.96
SDHAF3-204ENST00000489852 PIM2Q9P1W9 311 aa21.06■□□□□ 0.96
SDHAF3-204ENST00000489852 DALRD3Q5D0E6 543 aaKnown RBP21.05■□□□□ 0.96
SDHAF3-204ENST00000489852 NLGN1Q8N2Q7 840 aa21.05■□□□□ 0.96
SDHAF3-204ENST00000489852 CGNL1Q0VF96 1302 aa21.04■□□□□ 0.96
SDHAF3-204ENST00000489852 CREBZFQ9NS37 354 aa21.04■□□□□ 0.96
SDHAF3-204ENST00000489852 RGPD2P0DJD1 1756 aa21.04■□□□□ 0.96
SDHAF3-204ENST00000489852 SBF1O95248 1867 aa21.03■□□□□ 0.96
SDHAF3-204ENST00000489852 SBNO2Q9Y2G9 1366 aa21.03■□□□□ 0.96
SDHAF3-204ENST00000489852 TMF1P82094 1093 aa21.03■□□□□ 0.96
SDHAF3-204ENST00000489852 ZC3H4Q9UPT8 1303 aaKnown RBP21.03■□□□□ 0.96
SDHAF3-204ENST00000489852 GLTPD2A6NH11 291 aa21.02■□□□□ 0.96
SDHAF3-204ENST00000489852 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
SDHAF3-204ENST00000489852 SIK1P57059 783 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms