RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 PAPPAQ13219 1627 aa12.72□□□□□ -0.37
GTF3C5-210ENST00000489842 STK32BQ9NY57 414 aa12.71□□□□□ -0.37
GTF3C5-210ENST00000489842 NSD2O96028 1365 aa12.7□□□□□ -0.38
GTF3C5-210ENST00000489842 TUBGCP6Q96RT7 1819 aa12.7□□□□□ -0.38
GTF3C5-210ENST00000489842 PTGER2P43116 358 aa12.7□□□□□ -0.38
GTF3C5-210ENST00000489842 PPM1GO15355 546 aaPredicted RBP12.69□□□□□ -0.38
GTF3C5-210ENST00000489842 HSPA5P11021 654 aaKnown RBP12.69□□□□□ -0.38
GTF3C5-210ENST00000489842 ZCRB1Q8TBF4 217 aaKnown RBP12.69□□□□□ -0.38
GTF3C5-210ENST00000489842 MAP2P11137 1827 aaKnown RBP12.68□□□□□ -0.38
GTF3C5-210ENST00000489842 TNNT2P45379 298 aaPredicted RBP12.68□□□□□ -0.38
GTF3C5-210ENST00000489842 RTL1A6NKG5 1358 aa12.68□□□□□ -0.38
GTF3C5-210ENST00000489842 CCER1Q8TC90 406 aaPredicted RBP12.67□□□□□ -0.38
GTF3C5-210ENST00000489842 TOGARAM1Q9Y4F4 1720 aa12.67□□□□□ -0.38
GTF3C5-210ENST00000489842 LY75O60449 1722 aa12.66□□□□□ -0.38
GTF3C5-210ENST00000489842 SLC24A1O60721 1099 aa12.66□□□□□ -0.38
GTF3C5-210ENST00000489842 INSRP06213 1382 aa12.66□□□□□ -0.38
GTF3C5-210ENST00000489842 CDCA8Q53HL2 280 aa12.65□□□□□ -0.38
GTF3C5-210ENST00000489842 SMIM5Q71RC9 77 aa12.65□□□□□ -0.38
GTF3C5-210ENST00000489842 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
GTF3C5-210ENST00000489842 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
GTF3C5-210ENST00000489842 FLT4P35916 1363 aa12.65□□□□□ -0.38
GTF3C5-210ENST00000489842 CYP27B1O15528 508 aa12.64□□□□□ -0.39
GTF3C5-210ENST00000489842 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
GTF3C5-210ENST00000489842 RAPGEF4Q8WZA2 1011 aa12.64□□□□□ -0.39
GTF3C5-210ENST00000489842 FHDC1Q9C0D6 1143 aaPredicted RBP12.64□□□□□ -0.39
GTF3C5-210ENST00000489842 ANKRD26Q9UPS8 1709 aa12.64□□□□□ -0.39
GTF3C5-210ENST00000489842 ITGB4P16144 1822 aa12.63□□□□□ -0.39
GTF3C5-210ENST00000489842 PANK3Q9H999 370 aa12.63□□□□□ -0.39
GTF3C5-210ENST00000489842 POLKQ9UBT6 870 aa12.63□□□□□ -0.39
GTF3C5-210ENST00000489842 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
GTF3C5-210ENST00000489842 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
GTF3C5-210ENST00000489842 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
GTF3C5-210ENST00000489842 EYA1Q99502 592 aa12.62□□□□□ -0.39
GTF3C5-210ENST00000489842 MTFR1LQ9H019 292 aa12.62□□□□□ -0.39
GTF3C5-210ENST00000489842 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
GTF3C5-210ENST00000489842 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
GTF3C5-210ENST00000489842 MPRIPQ6WCQ1 1025 aa12.61□□□□□ -0.39
GTF3C5-210ENST00000489842 KLHL34Q8N239 644 aa12.61□□□□□ -0.39
GTF3C5-210ENST00000489842 SYT17Q9BSW7 474 aa12.61□□□□□ -0.39
GTF3C5-210ENST00000489842 CCNL1Q9UK58 526 aaPredicted RBP12.61□□□□□ -0.39
GTF3C5-210ENST00000489842 PKD1L3Q7Z443 1732 aa12.61□□□□□ -0.39
GTF3C5-210ENST00000489842 YY1P25490 414 aa12.6□□□□□ -0.39
GTF3C5-210ENST00000489842 EIF4A2Q14240 407 aaKnown RBP12.6□□□□□ -0.39
GTF3C5-210ENST00000489842 AMIGO3Q86WK7 504 aa12.6□□□□□ -0.39
GTF3C5-210ENST00000489842 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
GTF3C5-210ENST00000489842 CGNL1Q0VF96 1302 aa12.6□□□□□ -0.39
GTF3C5-210ENST00000489842 QSER1Q2KHR3 1735 aa12.59□□□□□ -0.39
GTF3C5-210ENST00000489842 SLC27A3Q5K4L6 730 aa12.59□□□□□ -0.39
GTF3C5-210ENST00000489842 MSL1Q68DK7 614 aa12.59□□□□□ -0.39
GTF3C5-210ENST00000489842 ARXQ96QS3 562 aa12.59□□□□□ -0.39
GTF3C5-210ENST00000489842 WASHC2AQ641Q2 1341 aa12.59□□□□□ -0.39
GTF3C5-210ENST00000489842 C5P01031 1676 aa12.58□□□□□ -0.4
GTF3C5-210ENST00000489842 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
GTF3C5-210ENST00000489842 MSH5O43196 834 aa12.58□□□□□ -0.4
GTF3C5-210ENST00000489842 NCAPD2Q15021 1401 aa12.58□□□□□ -0.4
GTF3C5-210ENST00000489842 COL23A1Q86Y22 540 aaPredicted RBP12.58□□□□□ -0.4
GTF3C5-210ENST00000489842 PCDH11XQ9BZA7 1347 aa12.58□□□□□ -0.4
GTF3C5-210ENST00000489842 PCDH11YQ9BZA8 1340 aa12.58□□□□□ -0.4
GTF3C5-210ENST00000489842 UTRNP46939 3433 aa12.58□□□□□ -0.4
GTF3C5-210ENST00000489842 PIGBQ92521 554 aa12.57□□□□□ -0.4
GTF3C5-210ENST00000489842 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
GTF3C5-210ENST00000489842 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
GTF3C5-210ENST00000489842 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
GTF3C5-210ENST00000489842 NLGN2Q8NFZ4 835 aa12.56□□□□□ -0.4
GTF3C5-210ENST00000489842 COL24A1Q17RW2 1714 aa12.56□□□□□ -0.4
GTF3C5-210ENST00000489842 AEBP1Q8IUX7 1158 aa12.55□□□□□ -0.4
GTF3C5-210ENST00000489842 PHKG2P15735 406 aa12.54□□□□□ -0.4
GTF3C5-210ENST00000489842 ASAP1Q9ULH1 1129 aa12.54□□□□□ -0.4
GTF3C5-210ENST00000489842 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
GTF3C5-210ENST00000489842 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
GTF3C5-210ENST00000489842 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
GTF3C5-210ENST00000489842 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
GTF3C5-210ENST00000489842 PHF14O94880 888 aa12.52□□□□□ -0.41
GTF3C5-210ENST00000489842 ITPK1Q13572 414 aa12.52□□□□□ -0.41
GTF3C5-210ENST00000489842 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
GTF3C5-210ENST00000489842 SPG7Q9UQ90 795 aa12.52□□□□□ -0.41
GTF3C5-210ENST00000489842 KIF7Q2M1P5 1343 aa12.52□□□□□ -0.41
GTF3C5-210ENST00000489842 UBR3Q6ZT12 1888 aa12.51□□□□□ -0.41
GTF3C5-210ENST00000489842 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
GTF3C5-210ENST00000489842 WWC3Q9ULE0 1092 aa12.51□□□□□ -0.41
GTF3C5-210ENST00000489842 IGSF1Q8N6C5 1336 aa12.51□□□□□ -0.41
GTF3C5-210ENST00000489842 POLD1P28340 1107 aa12.5□□□□□ -0.41
GTF3C5-210ENST00000489842 IFNL2Q8IZJ0 200 aa12.5□□□□□ -0.41
GTF3C5-210ENST00000489842 SLC16A10Q8TF71 515 aa12.5□□□□□ -0.41
GTF3C5-210ENST00000489842 SLC4A9Q96Q91 983 aa12.5□□□□□ -0.41
GTF3C5-210ENST00000489842 ATG3Q9NT62 314 aa12.5□□□□□ -0.41
GTF3C5-210ENST00000489842 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
GTF3C5-210ENST00000489842 GOLGB1Q14789 3259 aaKnown RBP12.49□□□□□ -0.41
GTF3C5-210ENST00000489842 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
GTF3C5-210ENST00000489842 LOC102724428A0A0B4J2F2 783 aa12.49□□□□□ -0.41
GTF3C5-210ENST00000489842 SIK1P57059 783 aa12.49□□□□□ -0.41
GTF3C5-210ENST00000489842 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
GTF3C5-210ENST00000489842 GPR162Q16538 588 aa12.48□□□□□ -0.41
GTF3C5-210ENST00000489842 CC2D1BQ5T0F9 858 aaKnown RBP12.48□□□□□ -0.41
GTF3C5-210ENST00000489842 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
GTF3C5-210ENST00000489842 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
GTF3C5-210ENST00000489842 AK7Q96M32 723 aa12.48□□□□□ -0.41
GTF3C5-210ENST00000489842 KNSTRNQ9Y448 316 aa12.48□□□□□ -0.41
GTF3C5-210ENST00000489842 CHD4Q14839 1912 aa12.47□□□□□ -0.41
GTF3C5-210ENST00000489842 MAP3K5Q99683 1374 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 332.6 ms