RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-222ENST00000489772 TATP17735 454 aaPredicted RBP15.1■□□□□ 0.01
GGA1-222ENST00000489772 ZCRB1Q8TBF4 217 aaKnown RBP15.1■□□□□ 0.01
GGA1-222ENST00000489772 WNK3Q9BYP7 1800 aa15.09■□□□□ 0.01
GGA1-222ENST00000489772 EIF4A2Q14240 407 aaKnown RBP15.08■□□□□ 0
GGA1-222ENST00000489772 CC2D1BQ5T0F9 858 aaKnown RBP15.08■□□□□ 0
GGA1-222ENST00000489772 MEGF6O75095 1541 aa15.07■□□□□ 0
GGA1-222ENST00000489772 PLSCR1O15162 318 aa15.07■□□□□ 0
GGA1-222ENST00000489772 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
GGA1-222ENST00000489772 ACSBG1Q96GR2 724 aa15.07■□□□□ 0
GGA1-222ENST00000489772 EYA1Q99502 592 aa15.07■□□□□ 0
GGA1-222ENST00000489772 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
GGA1-222ENST00000489772 ANKRD26Q9UPS8 1709 aa15.06■□□□□ 0
GGA1-222ENST00000489772 KCNQ2O43526 872 aa15.05■□□□□ -0
GGA1-222ENST00000489772 NPC1L1Q9UHC9 1359 aa15.05■□□□□ -0
GGA1-222ENST00000489772 CNGB1Q14028 1251 aaPredicted RBP15.04■□□□□ -0
GGA1-222ENST00000489772 PCDH11XQ9BZA7 1347 aa15.03■□□□□ -0
GGA1-222ENST00000489772 PCDH11YQ9BZA8 1340 aa15.03■□□□□ -0
GGA1-222ENST00000489772 NBPF14Q5TI25 921 aa15.03■□□□□ -0
GGA1-222ENST00000489772 NCAPD2Q15021 1401 aa15.03■□□□□ -0
GGA1-222ENST00000489772 MTHFSP49914 203 aa15.02■□□□□ -0
GGA1-222ENST00000489772 SPG7Q9UQ90 795 aa15.02■□□□□ -0
GGA1-222ENST00000489772 IGSF1Q8N6C5 1336 aa15.02□□□□□ -0.01
GGA1-222ENST00000489772 SYTL4Q96C24 671 aaPredicted RBP15.01□□□□□ -0.01
GGA1-222ENST00000489772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.01□□□□□ -0.01
GGA1-222ENST00000489772 SRCAPQ6ZRS2 3230 aa15.01□□□□□ -0.01
GGA1-222ENST00000489772 MAP2P11137 1827 aaKnown RBP15□□□□□ -0.01
GGA1-222ENST00000489772 PSDA5PKW4 1024 aaPredicted RBP15□□□□□ -0.01
GGA1-222ENST00000489772 ZEB1P37275 1124 aaPredicted RBP15□□□□□ -0.01
GGA1-222ENST00000489772 PRIM1P49642 420 aaKnown RBP15□□□□□ -0.01
GGA1-222ENST00000489772 IL13P35225 146 aa14.99□□□□□ -0.01
GGA1-222ENST00000489772 R3HDM1Q15032 1099 aaKnown RBP14.99□□□□□ -0.01
GGA1-222ENST00000489772 RGPD2P0DJD1 1756 aa14.99□□□□□ -0.01
GGA1-222ENST00000489772 CYP27B1O15528 508 aa14.98□□□□□ -0.01
GGA1-222ENST00000489772 TXNRD1Q16881 649 aa14.98□□□□□ -0.01
GGA1-222ENST00000489772 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
GGA1-222ENST00000489772 PROM2Q8N271 834 aa14.98□□□□□ -0.01
GGA1-222ENST00000489772 PLEKHG2Q9H7P9 1386 aa14.98□□□□□ -0.01
GGA1-222ENST00000489772 SULT6B1Q6IMI4 303 aa14.98□□□□□ -0.01
GGA1-222ENST00000489772 DIAPH1O60610 1272 aaKnown RBP14.97□□□□□ -0.01
GGA1-222ENST00000489772 PLEKHO1Q53GL0 409 aaPredicted RBP14.97□□□□□ -0.01
GGA1-222ENST00000489772 SBF2Q86WG5 1849 aa14.96□□□□□ -0.01
GGA1-222ENST00000489772 NHSQ6T4R5 1651 aa14.96□□□□□ -0.01
GGA1-222ENST00000489772 NKX1-1Q15270 411 aaPredicted RBP14.96□□□□□ -0.02
GGA1-222ENST00000489772 AMOTQ4VCS5 1084 aa14.96□□□□□ -0.02
GGA1-222ENST00000489772 AEBP1Q8IUX7 1158 aa14.96□□□□□ -0.02
GGA1-222ENST00000489772 IFNL2Q8IZJ0 200 aa14.96□□□□□ -0.02
GGA1-222ENST00000489772 PHKG2P15735 406 aa14.95□□□□□ -0.02
GGA1-222ENST00000489772 RGPD3A6NKT7 1758 aaPredicted RBP14.94□□□□□ -0.02
GGA1-222ENST00000489772 RGPD4Q7Z3J3 1758 aa14.94□□□□□ -0.02
GGA1-222ENST00000489772 MPRIPQ6WCQ1 1025 aa14.94□□□□□ -0.02
GGA1-222ENST00000489772 STK32BQ9NY57 414 aa14.94□□□□□ -0.02
GGA1-222ENST00000489772 KDRP35968 1356 aa14.94□□□□□ -0.02
GGA1-222ENST00000489772 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
GGA1-222ENST00000489772 CFAP53Q96M91 514 aa14.93□□□□□ -0.02
GGA1-222ENST00000489772 RREB1Q92766 1687 aa14.93□□□□□ -0.02
GGA1-222ENST00000489772 SHANK3Q9BYB0 1731 aa14.92□□□□□ -0.02
GGA1-222ENST00000489772 HSP90AB1P08238 724 aaKnown RBP14.92□□□□□ -0.02
GGA1-222ENST00000489772 ANO8Q9HCE9 1232 aaPredicted RBP14.92□□□□□ -0.02
GGA1-222ENST00000489772 NUP188Q5SRE5 1749 aa14.91□□□□□ -0.02
GGA1-222ENST00000489772 HMOX1P09601 288 aa14.91□□□□□ -0.02
GGA1-222ENST00000489772 PPP2R1AP30153 589 aa14.91□□□□□ -0.02
GGA1-222ENST00000489772 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
GGA1-222ENST00000489772 ZNF530Q6P9A1 599 aaPredicted RBP14.91□□□□□ -0.02
GGA1-222ENST00000489772 PKD1L3Q7Z443 1732 aa14.91□□□□□ -0.02
GGA1-222ENST00000489772 U2SURPO15042 1029 aaKnown RBP14.9□□□□□ -0.02
GGA1-222ENST00000489772 SLC15A2Q16348 729 aa14.9□□□□□ -0.02
GGA1-222ENST00000489772 DCAF5Q96JK2 942 aa14.9□□□□□ -0.02
GGA1-222ENST00000489772 LRRC4BQ9NT99 713 aa14.9□□□□□ -0.02
GGA1-222ENST00000489772 TMOD3Q9NYL9 352 aa14.9□□□□□ -0.02
GGA1-222ENST00000489772 DDX10Q13206 875 aaKnown RBP14.89□□□□□ -0.03
GGA1-222ENST00000489772 PIGBQ92521 554 aa14.89□□□□□ -0.03
GGA1-222ENST00000489772 SMARCC1Q92922 1105 aaPredicted RBP14.89□□□□□ -0.03
GGA1-222ENST00000489772 CCNL1Q9UK58 526 aaPredicted RBP14.89□□□□□ -0.03
GGA1-222ENST00000489772 BTAF1O14981 1849 aa14.89□□□□□ -0.03
GGA1-222ENST00000489772 DOT1LQ8TEK3 1739 aa14.89□□□□□ -0.03
GGA1-222ENST00000489772 HMGB2P26583 209 aaKnown RBP14.88□□□□□ -0.03
GGA1-222ENST00000489772 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
GGA1-222ENST00000489772 PALLDQ8WX93 1383 aa14.88□□□□□ -0.03
GGA1-222ENST00000489772 ERVV-2B6SEH9 535 aa14.87□□□□□ -0.03
GGA1-222ENST00000489772 NUDCQ9Y266 331 aa14.87□□□□□ -0.03
GGA1-222ENST00000489772 KCNQ4P56696 695 aa14.86□□□□□ -0.03
GGA1-222ENST00000489772 AKAP4Q5JQC9 854 aa14.85□□□□□ -0.03
GGA1-222ENST00000489772 CABP4P57796 275 aa14.85□□□□□ -0.03
GGA1-222ENST00000489772 RALBP1Q15311 655 aa14.85□□□□□ -0.03
GGA1-222ENST00000489772 ZNF827Q17R98 1081 aa14.85□□□□□ -0.03
GGA1-222ENST00000489772 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
GGA1-222ENST00000489772 KAT6BQ8WYB5 2073 aa14.84□□□□□ -0.03
GGA1-222ENST00000489772 MTHFSDQ2M296 383 aaKnown RBP14.84□□□□□ -0.03
GGA1-222ENST00000489772 SPON1Q9HCB6 807 aa14.84□□□□□ -0.03
GGA1-222ENST00000489772 TFCP2L1Q9NZI6 479 aa14.84□□□□□ -0.03
GGA1-222ENST00000489772 ASAP1Q9ULH1 1129 aa14.84□□□□□ -0.03
GGA1-222ENST00000489772 U2AF1L5P0DN76 240 aaPredicted RBP14.83□□□□□ -0.04
GGA1-222ENST00000489772 U2AF1Q01081 240 aaKnown RBP eCLIP14.83□□□□□ -0.04
GGA1-222ENST00000489772 PDGFDQ9GZP0 370 aaPredicted RBP14.83□□□□□ -0.04
GGA1-222ENST00000489772 ATG3Q9NT62 314 aa14.83□□□□□ -0.04
GGA1-222ENST00000489772 KDM6AO15550 1401 aaPredicted RBP14.83□□□□□ -0.04
GGA1-222ENST00000489772 LOC102724428A0A0B4J2F2 783 aa14.82□□□□□ -0.04
GGA1-222ENST00000489772 ZBTB7AO95365 584 aa14.82□□□□□ -0.04
GGA1-222ENST00000489772 SIK1P57059 783 aa14.82□□□□□ -0.04
GGA1-222ENST00000489772 TOGARAM1Q9Y4F4 1720 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms