RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 PARD3Q8TEW0 1356 aa10.64□□□□□ -0.71
SSR1-210ENST00000489567 PRKCSHP14314 528 aaPredicted RBP10.64□□□□□ -0.71
SSR1-210ENST00000489567 PPP2R1AP30153 589 aa10.64□□□□□ -0.71
SSR1-210ENST00000489567 IL13P35225 146 aa10.64□□□□□ -0.71
SSR1-210ENST00000489567 TNS2Q63HR2 1409 aa10.64□□□□□ -0.71
SSR1-210ENST00000489567 EXOC5O00471 708 aa10.64□□□□□ -0.71
SSR1-210ENST00000489567 COL3A1P02461 1466 aaPredicted RBP10.63□□□□□ -0.71
SSR1-210ENST00000489567 IGSF1Q8N6C5 1336 aa10.63□□□□□ -0.71
SSR1-210ENST00000489567 OVOS2A0A0G2JMS6 1433 aa10.62□□□□□ -0.71
SSR1-210ENST00000489567 AEBP1Q8IUX7 1158 aa10.62□□□□□ -0.71
SSR1-210ENST00000489567 RGPD1P0DJD0 1748 aa10.62□□□□□ -0.71
SSR1-210ENST00000489567 RAPGEF4Q8WZA2 1011 aa10.61□□□□□ -0.71
SSR1-210ENST00000489567 SHANK3Q9BYB0 1731 aa10.61□□□□□ -0.71
SSR1-210ENST00000489567 FAM196AQ6ZSG2 479 aa10.61□□□□□ -0.71
SSR1-210ENST00000489567 PTF1AQ7RTS3 328 aa10.61□□□□□ -0.71
SSR1-210ENST00000489567 DDX54Q8TDD1 881 aaKnown RBP10.61□□□□□ -0.71
SSR1-210ENST00000489567 DIAPH1O60610 1272 aaKnown RBP10.6□□□□□ -0.71
SSR1-210ENST00000489567 TRIM37O94972 964 aa10.6□□□□□ -0.71
SSR1-210ENST00000489567 TATP17735 454 aaPredicted RBP10.6□□□□□ -0.71
SSR1-210ENST00000489567 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
SSR1-210ENST00000489567 SULT6B1Q6IMI4 303 aa10.59□□□□□ -0.71
SSR1-210ENST00000489567 HMOX1P09601 288 aa10.59□□□□□ -0.71
SSR1-210ENST00000489567 RALBP1Q15311 655 aa10.59□□□□□ -0.71
SSR1-210ENST00000489567 KDRP35968 1356 aa10.59□□□□□ -0.71
SSR1-210ENST00000489567 CYP27B1O15528 508 aa10.58□□□□□ -0.72
SSR1-210ENST00000489567 DEFB132Q7Z7B7 95 aa10.58□□□□□ -0.72
SSR1-210ENST00000489567 PRKRIP1Q9H875 184 aaPredicted RBP10.58□□□□□ -0.72
SSR1-210ENST00000489567 BCL9O00512 1426 aa10.58□□□□□ -0.72
SSR1-210ENST00000489567 PKD1L3Q7Z443 1732 aa10.57□□□□□ -0.72
SSR1-210ENST00000489567 KCNQ2O43526 872 aa10.57□□□□□ -0.72
SSR1-210ENST00000489567 ACSBG1Q96GR2 724 aa10.57□□□□□ -0.72
SSR1-210ENST00000489567 SBF2Q86WG5 1849 aa10.57□□□□□ -0.72
SSR1-210ENST00000489567 TNS1Q9HBL0 1735 aaKnown RBP10.57□□□□□ -0.72
SSR1-210ENST00000489567 U2SURPO15042 1029 aaKnown RBP10.57□□□□□ -0.72
SSR1-210ENST00000489567 CCDC125Q86Z20 511 aa10.57□□□□□ -0.72
SSR1-210ENST00000489567 CFAP53Q96M91 514 aa10.57□□□□□ -0.72
SSR1-210ENST00000489567 MYBBP1AQ9BQG0 1328 aaKnown RBP10.56□□□□□ -0.72
SSR1-210ENST00000489567 PCDH11XQ9BZA7 1347 aa10.56□□□□□ -0.72
SSR1-210ENST00000489567 PCDH11YQ9BZA8 1340 aa10.56□□□□□ -0.72
SSR1-210ENST00000489567 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.725e-11■■■□□ 15
SSR1-210ENST00000489567 EN1Q05925 392 aaPredicted RBP10.55□□□□□ -0.72
SSR1-210ENST00000489567 SF3B2Q13435 895 aaKnown RBP10.55□□□□□ -0.72
SSR1-210ENST00000489567 ARXQ96QS3 562 aa10.55□□□□□ -0.72
SSR1-210ENST00000489567 BCL11BQ9C0K0 894 aaPredicted RBP10.55□□□□□ -0.72
SSR1-210ENST00000489567 SPG7Q9UQ90 795 aa10.55□□□□□ -0.72
SSR1-210ENST00000489567 APBA3O96018 575 aa10.54□□□□□ -0.72
SSR1-210ENST00000489567 PHKG2P15735 406 aa10.54□□□□□ -0.72
SSR1-210ENST00000489567 NHSQ6T4R5 1651 aa10.53□□□□□ -0.72
SSR1-210ENST00000489567 PRIM1P49642 420 aaKnown RBP10.53□□□□□ -0.72
SSR1-210ENST00000489567 RSPH6AQ9H0K4 717 aa10.53□□□□□ -0.72
SSR1-210ENST00000489567 PLEKHG2Q9H7P9 1386 aa10.53□□□□□ -0.72
SSR1-210ENST00000489567 DOT1LQ8TEK3 1739 aa10.53□□□□□ -0.72
SSR1-210ENST00000489567 TOGARAM1Q9Y4F4 1720 aa10.53□□□□□ -0.72
SSR1-210ENST00000489567 U2AF1L5P0DN76 240 aaPredicted RBP10.53□□□□□ -0.72
SSR1-210ENST00000489567 BAG6P46379 1132 aa10.53□□□□□ -0.72
SSR1-210ENST00000489567 U2AF1Q01081 240 aaKnown RBP eCLIP10.53□□□□□ -0.72
SSR1-210ENST00000489567 NKX1-1Q15270 411 aaPredicted RBP10.53□□□□□ -0.72
SSR1-210ENST00000489567 EZH2Q15910 746 aaKnown RBP10.53□□□□□ -0.72
SSR1-210ENST00000489567 PLEKHO1Q53GL0 409 aaPredicted RBP10.53□□□□□ -0.72
SSR1-210ENST00000489567 ZNF530Q6P9A1 599 aaPredicted RBP10.53□□□□□ -0.72
SSR1-210ENST00000489567 MTHFSDQ2M296 383 aaKnown RBP10.52□□□□□ -0.73
SSR1-210ENST00000489567 AMOTQ4VCS5 1084 aa10.52□□□□□ -0.73
SSR1-210ENST00000489567 CCDC184Q52MB2 194 aa10.52□□□□□ -0.73
SSR1-210ENST00000489567 IFNL2Q8IZJ0 200 aa10.52□□□□□ -0.73
SSR1-210ENST00000489567 SYTL4Q96C24 671 aaPredicted RBP10.52□□□□□ -0.73
SSR1-210ENST00000489567 PHACTR3Q96KR7 559 aa10.52□□□□□ -0.73
SSR1-210ENST00000489567 CAMKK2Q96RR4 588 aa10.52□□□□□ -0.73
SSR1-210ENST00000489567 NUDCQ9Y266 331 aa10.52□□□□□ -0.73
SSR1-210ENST00000489567 PRKAR2BP31323 418 aa10.51□□□□□ -0.73
SSR1-210ENST00000489567 KDM6AO15550 1401 aaPredicted RBP10.51□□□□□ -0.73
SSR1-210ENST00000489567 BTAF1O14981 1849 aa10.5□□□□□ -0.73
SSR1-210ENST00000489567 PROM2Q8N271 834 aa10.5□□□□□ -0.73
SSR1-210ENST00000489567 PLSCR1O15162 318 aa10.49□□□□□ -0.73
SSR1-210ENST00000489567 FCHSD2O94868 740 aa10.49□□□□□ -0.73
SSR1-210ENST00000489567 MPRIPQ6WCQ1 1025 aa10.49□□□□□ -0.73
SSR1-210ENST00000489567 KAT6BQ8WYB5 2073 aa10.49□□□□□ -0.73
SSR1-210ENST00000489567 ANP32CO43423 234 aa10.49□□□□□ -0.73
SSR1-210ENST00000489567 PLEKHF1Q96S99 279 aa10.49□□□□□ -0.73
SSR1-210ENST00000489567 AKAP4Q5JQC9 854 aa10.48□□□□□ -0.73
SSR1-210ENST00000489567 C1orf141Q5JVX7 400 aa10.48□□□□□ -0.73
SSR1-210ENST00000489567 PIGBQ92521 554 aa10.48□□□□□ -0.73
SSR1-210ENST00000489567 DCAF5Q96JK2 942 aa10.48□□□□□ -0.73
SSR1-210ENST00000489567 LGR6Q9HBX8 967 aa10.48□□□□□ -0.73
SSR1-210ENST00000489567 ITGB4P16144 1822 aa10.48□□□□□ -0.73
SSR1-210ENST00000489567 RREB1Q92766 1687 aa10.47□□□□□ -0.73
SSR1-210ENST00000489567 HSP90AB1P08238 724 aaKnown RBP10.47□□□□□ -0.73
SSR1-210ENST00000489567 KCNQ4P56696 695 aa10.47□□□□□ -0.73
SSR1-210ENST00000489567 TXNRD1Q16881 649 aa10.47□□□□□ -0.73
SSR1-210ENST00000489567 TAOK2Q9UL54 1235 aa10.47□□□□□ -0.73
SSR1-210ENST00000489567 NUP188Q5SRE5 1749 aa10.46□□□□□ -0.74
SSR1-210ENST00000489567 CACNB1Q02641 598 aaPredicted RBP10.46□□□□□ -0.74
SSR1-210ENST00000489567 LRRC4BQ9NT99 713 aa10.46□□□□□ -0.74
SSR1-210ENST00000489567 TMOD3Q9NYL9 352 aa10.46□□□□□ -0.74
SSR1-210ENST00000489567 ADAMTS8Q9UP79 889 aa10.46□□□□□ -0.74
SSR1-210ENST00000489567 RGPD3A6NKT7 1758 aaPredicted RBP10.46□□□□□ -0.74
SSR1-210ENST00000489567 RGPD4Q7Z3J3 1758 aa10.46□□□□□ -0.74
SSR1-210ENST00000489567 ERVV-2B6SEH9 535 aa10.45□□□□□ -0.74
SSR1-210ENST00000489567 RNMTO43148 476 aaKnown RBP10.45□□□□□ -0.74
SSR1-210ENST00000489567 IL17REQ8NFR9 667 aa10.45□□□□□ -0.74
SSR1-210ENST00000489567 GAS2L2Q8NHY3 880 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms