RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 CNTNAP3BQ96NU0 1288 aa11.66□□□□□ -0.54
SMC6-209ENST00000489535 CNTNAP3Q9BZ76 1288 aa11.66□□□□□ -0.54
SMC6-209ENST00000489535 DNMT1P26358 1616 aaKnown RBP11.65□□□□□ -0.54
SMC6-209ENST00000489535 PLEKHD1A6NEE1 506 aa11.65□□□□□ -0.54
SMC6-209ENST00000489535 MOXD2PA6NHM9 499 aa11.65□□□□□ -0.54
SMC6-209ENST00000489535 NR5A1Q13285 461 aa11.65□□□□□ -0.54
SMC6-209ENST00000489535 ARID5BQ14865 1188 aa11.65□□□□□ -0.54
SMC6-209ENST00000489535 MEIOBQ8N635 442 aa11.65□□□□□ -0.54
SMC6-209ENST00000489535 GCC2Q8IWJ2 1684 aa11.65□□□□□ -0.55
SMC6-209ENST00000489535 ABCC10Q5T3U5 1492 aa11.64□□□□□ -0.55
SMC6-209ENST00000489535 MTMR2Q13614 643 aa11.64□□□□□ -0.55
SMC6-209ENST00000489535 FAM50AQ14320 339 aaKnown RBP11.64□□□□□ -0.55
SMC6-209ENST00000489535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMC6-209ENST00000489535 MIA2Q96PC5 1412 aa11.63□□□□□ -0.55
SMC6-209ENST00000489535 GRM5P41594 1212 aa11.63□□□□□ -0.55
SMC6-209ENST00000489535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMC6-209ENST00000489535 SPDYE5A6NIY4 337 aa11.62□□□□□ -0.55
SMC6-209ENST00000489535 ZNF385CQ66K41 422 aaPredicted RBP11.62□□□□□ -0.55
SMC6-209ENST00000489535 UPP2O95045 317 aa11.61□□□□□ -0.55
SMC6-209ENST00000489535 CTHP32929 405 aa11.61□□□□□ -0.55
SMC6-209ENST00000489535 ITGAEP38570 1179 aa11.61□□□□□ -0.55
SMC6-209ENST00000489535 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
SMC6-209ENST00000489535 LYPD8Q6UX82 237 aa11.61□□□□□ -0.55
SMC6-209ENST00000489535 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
SMC6-209ENST00000489535 CAMSAP2Q08AD1 1489 aa11.6□□□□□ -0.55
SMC6-209ENST00000489535 SSTR3P32745 418 aaPredicted RBP11.6□□□□□ -0.55
SMC6-209ENST00000489535 ABCA9Q8IUA7 1624 aa11.6□□□□□ -0.55
SMC6-209ENST00000489535 SAMD9LQ8IVG5 1584 aa11.59□□□□□ -0.55
SMC6-209ENST00000489535 XP32Q5T750 250 aa11.59□□□□□ -0.55
SMC6-209ENST00000489535 KRI1Q8N9T8 703 aaKnown RBP11.59□□□□□ -0.55
SMC6-209ENST00000489535 COL25A1Q9BXS0 654 aaPredicted RBP11.59□□□□□ -0.55
SMC6-209ENST00000489535 F12P00748 615 aaPredicted RBP11.58□□□□□ -0.56
SMC6-209ENST00000489535 KRTAP4-8Q9BYQ9 185 aa11.58□□□□□ -0.56
SMC6-209ENST00000489535 MAP10Q9P2G4 905 aa11.58□□□□□ -0.56
SMC6-209ENST00000489535 WDR7Q9Y4E6 1490 aa11.57□□□□□ -0.56
SMC6-209ENST00000489535 SPTLC1O15269 473 aa11.57□□□□□ -0.56
SMC6-209ENST00000489535 GPAT2Q6NUI2 795 aa11.57□□□□□ -0.56
SMC6-209ENST00000489535 DNMT3AQ9Y6K1 912 aaPredicted RBP11.57□□□□□ -0.56
SMC6-209ENST00000489535 ARHGAP5Q13017 1502 aa11.56□□□□□ -0.56
SMC6-209ENST00000489535 RNFT1Q5M7Z0 435 aa11.56□□□□□ -0.56
SMC6-209ENST00000489535 NANOS1Q8WY41 292 aaKnown RBP11.56□□□□□ -0.56
SMC6-209ENST00000489535 ARHGEF5Q12774 1597 aa11.55□□□□□ -0.56
SMC6-209ENST00000489535 PTSQ03393 145 aa11.55□□□□□ -0.56
SMC6-209ENST00000489535 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.55□□□□□ -0.56
SMC6-209ENST00000489535 SVOPQ8N4V2 548 aa11.55□□□□□ -0.56
SMC6-209ENST00000489535 WHAMMQ8TF30 809 aa11.55□□□□□ -0.56
SMC6-209ENST00000489535 PTPRKQ15262 1439 aa11.54□□□□□ -0.56
SMC6-209ENST00000489535 ASXL2Q76L83 1435 aa11.54□□□□□ -0.56
SMC6-209ENST00000489535 CFAP99D6REC4 459 aa11.54□□□□□ -0.56
SMC6-209ENST00000489535 IGHA1P01876 353 aa11.54□□□□□ -0.56
SMC6-209ENST00000489535 TSEN34Q9BSV6 310 aaKnown RBP11.54□□□□□ -0.56
SMC6-209ENST00000489535 DAPK1P53355 1430 aa11.53□□□□□ -0.56
SMC6-209ENST00000489535 ARHGEF15O94989 841 aa11.53□□□□□ -0.56
SMC6-209ENST00000489535 HRCP23327 699 aa11.53□□□□□ -0.56
SMC6-209ENST00000489535 IRS1P35568 1242 aa11.53□□□□□ -0.56
SMC6-209ENST00000489535 CFDP1Q9UEE9 299 aaPredicted RBP11.53□□□□□ -0.56
SMC6-209ENST00000489535 TSPOAP1O95153 1857 aa11.53□□□□□ -0.56
SMC6-209ENST00000489535 SETD5Q9C0A6 1442 aa11.52□□□□□ -0.56
SMC6-209ENST00000489535 MAPKBP1O60336 1514 aa11.52□□□□□ -0.57
SMC6-209ENST00000489535 TTLL8A6PVC2 850 aa11.52□□□□□ -0.57
SMC6-209ENST00000489535 SLURP2P0DP57 97 aa11.52□□□□□ -0.57
SMC6-209ENST00000489535 BPHLQ86WA6 291 aaPredicted RBP11.52□□□□□ -0.57
SMC6-209ENST00000489535 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
SMC6-209ENST00000489535 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.57
SMC6-209ENST00000489535 ZNF644Q9H582 1327 aaPredicted RBP11.52□□□□□ -0.57
SMC6-209ENST00000489535 KIF13AQ9H1H9 1805 aa11.51□□□□□ -0.57
SMC6-209ENST00000489535 ARAP3Q8WWN8 1544 aa11.51□□□□□ -0.57
SMC6-209ENST00000489535 SYCP2Q9BX26 1530 aa11.51□□□□□ -0.57
SMC6-209ENST00000489535 AGERQ15109 404 aa11.51□□□□□ -0.57
SMC6-209ENST00000489535 CCER1Q8TC90 406 aaPredicted RBP11.51□□□□□ -0.57
SMC6-209ENST00000489535 C1QTNF2Q9BXJ5 285 aa11.51□□□□□ -0.57
SMC6-209ENST00000489535 KDM6BO15054 1643 aa11.5□□□□□ -0.57
SMC6-209ENST00000489535 FSHRP23945 695 aa11.5□□□□□ -0.57
SMC6-209ENST00000489535 GJA5P36382 358 aa11.5□□□□□ -0.57
SMC6-209ENST00000489535 RAB3GAP2Q9H2M9 1393 aa11.5□□□□□ -0.57
SMC6-209ENST00000489535 ABCC5O15440 1437 aa11.5□□□□□ -0.57
SMC6-209ENST00000489535 ABCC1P33527 1531 aa11.5□□□□□ -0.57
SMC6-209ENST00000489535 MAP3K4Q9Y6R4 1608 aa11.49□□□□□ -0.57
SMC6-209ENST00000489535 CCDC155Q8N6L0 562 aa11.49□□□□□ -0.57
SMC6-209ENST00000489535 MAP4K5Q9Y4K4 846 aa11.49□□□□□ -0.57
SMC6-209ENST00000489535 HFM1A2PYH4 1435 aa11.49□□□□□ -0.57
SMC6-209ENST00000489535 PLCH2O75038 1416 aa11.49□□□□□ -0.57
SMC6-209ENST00000489535 MAST1Q9Y2H9 1570 aa11.49□□□□□ -0.57
SMC6-209ENST00000489535 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
SMC6-209ENST00000489535 RSBN1LQ6PCB5 846 aaPredicted RBP11.48□□□□□ -0.57
SMC6-209ENST00000489535 PCDHB15Q9Y5E8 787 aa11.48□□□□□ -0.57
SMC6-209ENST00000489535 AKNAQ7Z591 1439 aa11.48□□□□□ -0.57
SMC6-209ENST00000489535 SHANK2Q9UPX8 1470 aa11.48□□□□□ -0.57
SMC6-209ENST00000489535 PLEKHH2Q8IVE3 1493 aa11.47□□□□□ -0.57
SMC6-209ENST00000489535 FIGNL2A6NMB9 653 aa11.47□□□□□ -0.57
SMC6-209ENST00000489535 FOXK2Q01167 660 aa11.47□□□□□ -0.57
SMC6-209ENST00000489535 KANK3Q6NY19 840 aa11.47□□□□□ -0.57
SMC6-209ENST00000489535 SH3RF1Q7Z6J0 888 aa11.47□□□□□ -0.57
SMC6-209ENST00000489535 CHIC2Q9UKJ5 165 aa11.47□□□□□ -0.57
SMC6-209ENST00000489535 ADGRL2O95490 1459 aa11.46□□□□□ -0.57
SMC6-209ENST00000489535 CCDC141Q6ZP82 1450 aa11.46□□□□□ -0.57
SMC6-209ENST00000489535 NAIPQ13075 1403 aa11.46□□□□□ -0.57
SMC6-209ENST00000489535 SLC35F4A4IF30 521 aa11.46□□□□□ -0.57
SMC6-209ENST00000489535 TULP1O00294 542 aaPredicted RBP11.46□□□□□ -0.57
SMC6-209ENST00000489535 EMILIN1Q9Y6C2 1016 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms