RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 HSPA1BP0DMV9 641 aaKnown RBP22.15■■□□□ 1.14
UFD1-209ENST00000489406 PRIM1P49642 420 aaKnown RBP22.15■■□□□ 1.14
UFD1-209ENST00000489406 FSTL1Q12841 308 aa22.13■■□□□ 1.13
UFD1-209ENST00000489406 LY75O60449 1722 aa22.12■■□□□ 1.13
UFD1-209ENST00000489406 ERBB3P21860 1342 aa22.1■■□□□ 1.13
UFD1-209ENST00000489406 CICQ96RK0 1608 aaPredicted RBP22.09■■□□□ 1.13
UFD1-209ENST00000489406 ANKRD36BQ8N2N9 1353 aa22.08■■□□□ 1.12
UFD1-209ENST00000489406 TTC21BQ7Z4L5 1316 aa22.07■■□□□ 1.12
UFD1-209ENST00000489406 NFAT5O94916 1531 aa22.07■■□□□ 1.12
UFD1-209ENST00000489406 FLAD1Q8NFF5 587 aa22.07■■□□□ 1.12
UFD1-209ENST00000489406 NSD2O96028 1365 aa22.07■■□□□ 1.12
UFD1-209ENST00000489406 QRICH2Q9H0J4 1663 aa22.04■■□□□ 1.12
UFD1-209ENST00000489406 ARHGAP27Q6ZUM4 889 aa22.04■■□□□ 1.12
UFD1-209ENST00000489406 STAC3Q96MF2 364 aa22.04■■□□□ 1.12
UFD1-209ENST00000489406 ANKRD24Q8TF21 1146 aa22.03■■□□□ 1.12
UFD1-209ENST00000489406 BCS1LQ9Y276 419 aa22.02■■□□□ 1.12
UFD1-209ENST00000489406 DOT1LQ8TEK3 1739 aa22.02■■□□□ 1.12
UFD1-209ENST00000489406 USP47Q96K76 1375 aa22.01■■□□□ 1.11
UFD1-209ENST00000489406 RRAGCQ9HB90 399 aa21.99■■□□□ 1.11
UFD1-209ENST00000489406 SMIM5Q71RC9 77 aa21.98■■□□□ 1.11
UFD1-209ENST00000489406 ZNF692Q9BU19 519 aaPredicted RBP21.98■■□□□ 1.11
UFD1-209ENST00000489406 TTC21AQ8NDW8 1320 aa21.98■■□□□ 1.11
UFD1-209ENST00000489406 CENPJQ9HC77 1338 aaPredicted RBP21.98■■□□□ 1.11
UFD1-209ENST00000489406 C5P01031 1676 aa21.98■■□□□ 1.11
UFD1-209ENST00000489406 C9orf131Q5VYM1 1079 aa21.97■■□□□ 1.11
UFD1-209ENST00000489406 AMIGO3Q86WK7 504 aa21.97■■□□□ 1.11
UFD1-209ENST00000489406 SMC1BQ8NDV3 1235 aa21.97■■□□□ 1.11
UFD1-209ENST00000489406 USP54Q70EL1 1684 aa21.96■■□□□ 1.11
UFD1-209ENST00000489406 PHF14O94880 888 aa21.96■■□□□ 1.11
UFD1-209ENST00000489406 KCPQ6ZWJ8 1503 aa21.96■■□□□ 1.11
UFD1-209ENST00000489406 KDM2BQ8NHM5 1336 aa21.95■■□□□ 1.1
UFD1-209ENST00000489406 FAM161AQ3B820 660 aa21.94■■□□□ 1.1
UFD1-209ENST00000489406 NBPF1Q3BBV0 1214 aa21.94■■□□□ 1.1
UFD1-209ENST00000489406 PXDNLA1KZ92 1463 aa21.94■■□□□ 1.1
UFD1-209ENST00000489406 A0A0G2JLW4 131 aa21.93■■□□□ 1.1
UFD1-209ENST00000489406 AK7Q96M32 723 aa21.93■■□□□ 1.1
UFD1-209ENST00000489406 PLEKHG2Q9H7P9 1386 aa21.93■■□□□ 1.1
UFD1-209ENST00000489406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.91■■□□□ 1.1
UFD1-209ENST00000489406 FCHSD2O94868 740 aa21.91■■□□□ 1.1
UFD1-209ENST00000489406 ZCRB1Q8TBF4 217 aaKnown RBP21.9■■□□□ 1.1
UFD1-209ENST00000489406 LTV1Q96GA3 475 aaPredicted RBP21.9■■□□□ 1.1
UFD1-209ENST00000489406 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.1
UFD1-209ENST00000489406 LTN1O94822 1766 aa21.89■■□□□ 1.1
UFD1-209ENST00000489406 N4BP2Q86UW6 1770 aaPredicted RBP21.89■■□□□ 1.1
UFD1-209ENST00000489406 HMGB2P26583 209 aaKnown RBP21.89■■□□□ 1.09
UFD1-209ENST00000489406 TAF1LQ8IZX4 1826 aa21.88■■□□□ 1.09
UFD1-209ENST00000489406 TGFB2P61812 414 aa21.88■■□□□ 1.09
UFD1-209ENST00000489406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.88■■□□□ 1.09
UFD1-209ENST00000489406 TOGARAM1Q9Y4F4 1720 aa21.88■■□□□ 1.09
UFD1-209ENST00000489406 KTN1Q86UP2 1357 aaKnown RBP21.87■■□□□ 1.09
UFD1-209ENST00000489406 C4BP0C0L5 1744 aa21.87■■□□□ 1.09
UFD1-209ENST00000489406 PALLDQ8WX93 1383 aa21.87■■□□□ 1.09
UFD1-209ENST00000489406 KIAA1551Q9HCM1 1747 aa21.86■■□□□ 1.09
UFD1-209ENST00000489406 MMP10P09238 476 aa21.86■■□□□ 1.09
UFD1-209ENST00000489406 DPEP1P16444 411 aa21.85■■□□□ 1.09
UFD1-209ENST00000489406 RNF181Q9P0P0 153 aa21.85■■□□□ 1.09
UFD1-209ENST00000489406 USP31Q70CQ4 1352 aa21.85■■□□□ 1.09
UFD1-209ENST00000489406 EVC2Q86UK5 1308 aa21.84■■□□□ 1.09
UFD1-209ENST00000489406 PKD1L3Q7Z443 1732 aa21.84■■□□□ 1.09
UFD1-209ENST00000489406 FOXN1O15353 648 aa21.84■■□□□ 1.09
UFD1-209ENST00000489406 NME9Q86XW9 330 aa21.84■■□□□ 1.09
UFD1-209ENST00000489406 KIAA1210Q9ULL0 1709 aa21.83■■□□□ 1.09
UFD1-209ENST00000489406 TNRC6CQ9HCJ0 1690 aaKnown RBP21.83■■□□□ 1.09
UFD1-209ENST00000489406 SSFA2P28290 1259 aa21.83■■□□□ 1.09
UFD1-209ENST00000489406 UBR3Q6ZT12 1888 aa21.83■■□□□ 1.08
UFD1-209ENST00000489406 PRDM10Q9NQV6 1147 aa21.82■■□□□ 1.08
UFD1-209ENST00000489406 NSD3Q9BZ95 1437 aa21.81■■□□□ 1.08
UFD1-209ENST00000489406 KIF13BQ9NQT8 1826 aa21.81■■□□□ 1.08
UFD1-209ENST00000489406 MPRIPQ6WCQ1 1025 aa21.81■■□□□ 1.08
UFD1-209ENST00000489406 IP6K1Q92551 441 aa21.8■■□□□ 1.08
UFD1-209ENST00000489406 MEGF6O75095 1541 aa21.8■■□□□ 1.08
UFD1-209ENST00000489406 MKRN1Q9UHC7 482 aaKnown RBP21.79■■□□□ 1.08
UFD1-209ENST00000489406 FAM208AQ9UK61 1670 aaKnown RBP21.77■■□□□ 1.08
UFD1-209ENST00000489406 MLLT1Q03111 559 aaPredicted RBP21.76■■□□□ 1.07
UFD1-209ENST00000489406 ABHD8Q96I13 439 aa21.76■■□□□ 1.07
UFD1-209ENST00000489406 VEGFAP15692 232 aaPredicted RBP21.75■■□□□ 1.07
UFD1-209ENST00000489406 KCNA3P22001 575 aa21.75■■□□□ 1.07
UFD1-209ENST00000489406 LINC00116Q8NCU8 138 aa21.75■■□□□ 1.07
UFD1-209ENST00000489406 SMARCC1Q92922 1105 aaPredicted RBP21.75■■□□□ 1.07
UFD1-209ENST00000489406 GNPATO15228 680 aa21.74■■□□□ 1.07
UFD1-209ENST00000489406 CCDC87Q9NVE4 849 aa21.74■■□□□ 1.07
UFD1-209ENST00000489406 BRCA1P38398 1863 aaKnown RBP21.73■■□□□ 1.07
UFD1-209ENST00000489406 MON2Q7Z3U7 1717 aa21.73■■□□□ 1.07
UFD1-209ENST00000489406 CTCFP49711 727 aaPredicted RBP21.73■■□□□ 1.07
UFD1-209ENST00000489406 DCAF5Q96JK2 942 aa21.73■■□□□ 1.07
UFD1-209ENST00000489406 PIM2Q9P1W9 311 aa21.73■■□□□ 1.07
UFD1-209ENST00000489406 ARFGEF1Q9Y6D6 1849 aa21.72■■□□□ 1.07
UFD1-209ENST00000489406 DALRD3Q5D0E6 543 aaKnown RBP21.71■■□□□ 1.07
UFD1-209ENST00000489406 AIDAQ96BJ3 306 aa21.71■■□□□ 1.07
UFD1-209ENST00000489406 RGPD2P0DJD1 1756 aa21.71■■□□□ 1.07
UFD1-209ENST00000489406 NLGN1Q8N2Q7 840 aa21.7■■□□□ 1.06
UFD1-209ENST00000489406 SBNO2Q9Y2G9 1366 aa21.7■■□□□ 1.06
UFD1-209ENST00000489406 LBX1P52954 281 aa21.69■■□□□ 1.06
UFD1-209ENST00000489406 TMF1P82094 1093 aa21.69■■□□□ 1.06
UFD1-209ENST00000489406 CREBZFQ9NS37 354 aa21.69■■□□□ 1.06
UFD1-209ENST00000489406 USHBP1Q8N6Y0 703 aa21.68■■□□□ 1.06
UFD1-209ENST00000489406 SBF1O95248 1867 aa21.67■■□□□ 1.06
UFD1-209ENST00000489406 LOC102724428A0A0B4J2F2 783 aa21.67■■□□□ 1.06
UFD1-209ENST00000489406 GLTPD2A6NH11 291 aa21.67■■□□□ 1.06
UFD1-209ENST00000489406 SIK1P57059 783 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms