RNA–Protein interactions for RNA: ENST00000489300.1

CDK11A-218, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-218ENST00000489300 PRKRIP1Q9H875 184 aaPredicted RBP23.38■■□□□ 1.33
CDK11A-218ENST00000489300 PCDH11XQ9BZA7 1347 aa23.37■■□□□ 1.33
CDK11A-218ENST00000489300 PCDH11YQ9BZA8 1340 aa23.37■■□□□ 1.33
CDK11A-218ENST00000489300 PLEKHO1Q53GL0 409 aaPredicted RBP23.37■■□□□ 1.33
CDK11A-218ENST00000489300 FAM182BQ5T319 152 aa23.37■■□□□ 1.33
CDK11A-218ENST00000489300 PARP4Q9UKK3 1724 aaKnown RBP23.36■■□□□ 1.33
CDK11A-218ENST00000489300 NCAPD2Q15021 1401 aa23.36■■□□□ 1.33
CDK11A-218ENST00000489300 BCL9O00512 1426 aa23.33■■□□□ 1.33
CDK11A-218ENST00000489300 MEGF6O75095 1541 aa23.33■■□□□ 1.33
CDK11A-218ENST00000489300 PNNQ9H307 717 aaKnown RBP23.33■■□□□ 1.33
CDK11A-218ENST00000489300 NEFMP07197 916 aa23.32■■□□□ 1.32
CDK11A-218ENST00000489300 U2AF1L5P0DN76 240 aaPredicted RBP23.32■■□□□ 1.32
CDK11A-218ENST00000489300 U2AF1Q01081 240 aaKnown RBP eCLIP23.32■■□□□ 1.32
CDK11A-218ENST00000489300 KDRP35968 1356 aa23.31■■□□□ 1.32
CDK11A-218ENST00000489300 TRIM37O94972 964 aa23.31■■□□□ 1.32
CDK11A-218ENST00000489300 HSP90AB1P08238 724 aaKnown RBP23.31■■□□□ 1.32
CDK11A-218ENST00000489300 BAG6P46379 1132 aa23.31■■□□□ 1.32
CDK11A-218ENST00000489300 IFNL2Q8IZJ0 200 aa23.31■■□□□ 1.32
CDK11A-218ENST00000489300 LRRC37A3O60309 1634 aa23.3■■□□□ 1.32
CDK11A-218ENST00000489300 HMOX1P09601 288 aa23.3■■□□□ 1.32
CDK11A-218ENST00000489300 AEBP1Q8IUX7 1158 aa23.3■■□□□ 1.32
CDK11A-218ENST00000489300 BCL11BQ9C0K0 894 aaPredicted RBP23.3■■□□□ 1.32
CDK11A-218ENST00000489300 C1orf141Q5JVX7 400 aa23.29■■□□□ 1.32
CDK11A-218ENST00000489300 BRWD3Q6RI45 1802 aa23.29■■□□□ 1.32
CDK11A-218ENST00000489300 FCHSD2O94868 740 aa23.28■■□□□ 1.32
CDK11A-218ENST00000489300 WNK3Q9BYP7 1800 aa23.27■■□□□ 1.32
CDK11A-218ENST00000489300 COL3A1P02461 1466 aaPredicted RBP23.27■■□□□ 1.32
CDK11A-218ENST00000489300 APBA3O96018 575 aa23.26■■□□□ 1.31
CDK11A-218ENST00000489300 ZNF530Q6P9A1 599 aaPredicted RBP23.25■■□□□ 1.31
CDK11A-218ENST00000489300 CYP27B1O15528 508 aa23.24■■□□□ 1.31
CDK11A-218ENST00000489300 PHKG2P15735 406 aa23.24■■□□□ 1.31
CDK11A-218ENST00000489300 WDR43Q15061 677 aaKnown RBP eCLIP23.24■■□□□ 1.31
CDK11A-218ENST00000489300 NKX1-1Q15270 411 aaPredicted RBP23.24■■□□□ 1.31
CDK11A-218ENST00000489300 GAS2L2Q8NHY3 880 aa23.24■■□□□ 1.31
CDK11A-218ENST00000489300 RGPD2P0DJD1 1756 aa23.23■■□□□ 1.31
CDK11A-218ENST00000489300 SYTL4Q96C24 671 aaPredicted RBP23.23■■□□□ 1.31
CDK11A-218ENST00000489300 ACSBG1Q96GR2 724 aa23.23■■□□□ 1.31
CDK11A-218ENST00000489300 AKAP4Q5JQC9 854 aa23.22■■□□□ 1.31
CDK11A-218ENST00000489300 DCAF5Q96JK2 942 aa23.22■■□□□ 1.31
CDK11A-218ENST00000489300 PRKAR2BP31323 418 aa23.21■■□□□ 1.31
CDK11A-218ENST00000489300 HMGB2P26583 209 aaKnown RBP23.2■■□□□ 1.3
CDK11A-218ENST00000489300 PRIM1P49642 420 aaKnown RBP23.2■■□□□ 1.3
CDK11A-218ENST00000489300 RSPH6AQ9H0K4 717 aa23.2■■□□□ 1.3
CDK11A-218ENST00000489300 EP400Q96L91 3159 aa23.2■■□□□ 1.3
CDK11A-218ENST00000489300 PLSCR1O15162 318 aa23.19■■□□□ 1.3
CDK11A-218ENST00000489300 RGPD1P0DJD0 1748 aa23.18■■□□□ 1.3
CDK11A-218ENST00000489300 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
CDK11A-218ENST00000489300 ERVV-2B6SEH9 535 aa23.17■■□□□ 1.3
CDK11A-218ENST00000489300 KCNQ2O43526 872 aa23.17■■□□□ 1.3
CDK11A-218ENST00000489300 MTHFSDQ2M296 383 aaKnown RBP23.17■■□□□ 1.3
CDK11A-218ENST00000489300 EN1Q05925 392 aaPredicted RBP23.16■■□□□ 1.3
CDK11A-218ENST00000489300 DEFB132Q7Z7B7 95 aa23.16■■□□□ 1.3
CDK11A-218ENST00000489300 TMOD3Q9NYL9 352 aa23.16■■□□□ 1.3
CDK11A-218ENST00000489300 MPRIPQ6WCQ1 1025 aa23.15■■□□□ 1.3
CDK11A-218ENST00000489300 RTF1Q92541 710 aaKnown RBP23.14■■□□□ 1.29
CDK11A-218ENST00000489300 GNAT3A8MTJ3 354 aa23.13■■□□□ 1.29
CDK11A-218ENST00000489300 CABP4P57796 275 aa23.13■■□□□ 1.29
CDK11A-218ENST00000489300 SMARCC1Q92922 1105 aaPredicted RBP23.13■■□□□ 1.29
CDK11A-218ENST00000489300 PKD1L3Q7Z443 1732 aa23.13■■□□□ 1.29
CDK11A-218ENST00000489300 CAMKK2Q96RR4 588 aa23.12■■□□□ 1.29
CDK11A-218ENST00000489300 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
CDK11A-218ENST00000489300 EZH2Q15910 746 aaKnown RBP23.1■■□□□ 1.29
CDK11A-218ENST00000489300 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
CDK11A-218ENST00000489300 HTATSF1O43719 755 aaKnown RBP23.09■■□□□ 1.29
CDK11A-218ENST00000489300 NBPF14Q5TI25 921 aa23.09■■□□□ 1.29
CDK11A-218ENST00000489300 SLC27A3Q5K4L6 730 aa23.08■■□□□ 1.29
CDK11A-218ENST00000489300 PTF1AQ7RTS3 328 aa23.08■■□□□ 1.29
CDK11A-218ENST00000489300 PIGBQ92521 554 aa23.08■■□□□ 1.29
CDK11A-218ENST00000489300 PLEKHF1Q96S99 279 aa23.08■■□□□ 1.29
CDK11A-218ENST00000489300 MAP3K5Q99683 1374 aa23.08■■□□□ 1.29
CDK11A-218ENST00000489300 DIEXFQ68CQ4 756 aaKnown RBP23.07■■□□□ 1.28
CDK11A-218ENST00000489300 RUNDC1Q96C34 613 aa23.07■■□□□ 1.28
CDK11A-218ENST00000489300 ADAMTS8Q9UP79 889 aa23.07■■□□□ 1.28
CDK11A-218ENST00000489300 RNMTO43148 476 aaKnown RBP23.06■■□□□ 1.28
CDK11A-218ENST00000489300 TEFQ10587 303 aa23.06■■□□□ 1.28
CDK11A-218ENST00000489300 LMOD3Q0VAK6 560 aa23.05■■□□□ 1.28
CDK11A-218ENST00000489300 NFE2L2Q16236 605 aa23.05■■□□□ 1.28
CDK11A-218ENST00000489300 TXNRD1Q16881 649 aa23.05■■□□□ 1.28
CDK11A-218ENST00000489300 NHSQ6T4R5 1651 aa23.05■■□□□ 1.28
CDK11A-218ENST00000489300 NFATC2IPQ8NCF5 419 aa23.04■■□□□ 1.28
CDK11A-218ENST00000489300 SLC52A2Q9HAB3 445 aa23.04■■□□□ 1.28
CDK11A-218ENST00000489300 SHANK3Q9BYB0 1731 aa23.04■■□□□ 1.28
CDK11A-218ENST00000489300 LGR6Q9HBX8 967 aa23.02■■□□□ 1.28
CDK11A-218ENST00000489300 KDM6AO15550 1401 aaPredicted RBP23.01■■□□□ 1.27
CDK11A-218ENST00000489300 CCNL1Q9UK58 526 aaPredicted RBP23.01■■□□□ 1.27
CDK11A-218ENST00000489300 TNS1Q9HBL0 1735 aaKnown RBP23■■□□□ 1.27
CDK11A-218ENST00000489300 PNISRQ8TF01 805 aaKnown RBP23■■□□□ 1.27
CDK11A-218ENST00000489300 SBF2Q86WG5 1849 aa23■■□□□ 1.27
CDK11A-218ENST00000489300 PALLDQ8WX93 1383 aa23■■□□□ 1.27
CDK11A-218ENST00000489300 RIPK4P57078 832 aa22.99■■□□□ 1.27
CDK11A-218ENST00000489300 CCDC146Q8IYE0 955 aa22.99■■□□□ 1.27
CDK11A-218ENST00000489300 IL17REQ8NFR9 667 aa22.99■■□□□ 1.27
CDK11A-218ENST00000489300 CCER2I3L3R5 266 aa22.98■■□□□ 1.27
CDK11A-218ENST00000489300 TTC5Q8N0Z6 440 aa22.98■■□□□ 1.27
CDK11A-218ENST00000489300 ATG3Q9NT62 314 aa22.98■■□□□ 1.27
CDK11A-218ENST00000489300 ASAP1Q9ULH1 1129 aa22.98■■□□□ 1.27
CDK11A-218ENST00000489300 DOT1LQ8TEK3 1739 aa22.98■■□□□ 1.27
CDK11A-218ENST00000489300 TMPOP42166 694 aaKnown RBP22.97■■□□□ 1.27
CDK11A-218ENST00000489300 PROM2Q8N271 834 aa22.97■■□□□ 1.27
CDK11A-218ENST00000489300 STK32BQ9NY57 414 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms