RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 KAT6BQ8WYB5 2073 aa32.71■■■□□ 2.83
PTPN18-213ENST00000489215 MEGF6O75095 1541 aa32.71■■■□□ 2.83
PTPN18-213ENST00000489215 NHSQ6T4R5 1651 aa32.7■■■□□ 2.83
PTPN18-213ENST00000489215 ACSBG1Q96GR2 724 aa32.67■■■□□ 2.82
PTPN18-213ENST00000489215 NCAPD2Q15021 1401 aa32.67■■■□□ 2.82
PTPN18-213ENST00000489215 KCNQ2O43526 872 aa32.66■■■□□ 2.82
PTPN18-213ENST00000489215 EYA1Q99502 592 aa32.66■■■□□ 2.82
PTPN18-213ENST00000489215 EIF4A2Q14240 407 aaKnown RBP32.65■■■□□ 2.82
PTPN18-213ENST00000489215 PTF1AQ7RTS3 328 aa32.65■■■□□ 2.82
PTPN18-213ENST00000489215 PCDH11XQ9BZA7 1347 aa32.65■■■□□ 2.82
PTPN18-213ENST00000489215 PCDH11YQ9BZA8 1340 aa32.65■■■□□ 2.82
PTPN18-213ENST00000489215 NPC1L1Q9UHC9 1359 aa32.65■■■□□ 2.82
PTPN18-213ENST00000489215 NUP188Q5SRE5 1749 aa32.63■■■□□ 2.81
PTPN18-213ENST00000489215 PLEKHG2Q9H7P9 1386 aa32.62■■■□□ 2.81
PTPN18-213ENST00000489215 PSDA5PKW4 1024 aaPredicted RBP32.62■■■□□ 2.81
PTPN18-213ENST00000489215 R3HDM1Q15032 1099 aaKnown RBP32.62■■■□□ 2.81
PTPN18-213ENST00000489215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.62■■■□□ 2.81
PTPN18-213ENST00000489215 SPG7Q9UQ90 795 aa32.62■■■□□ 2.81
PTPN18-213ENST00000489215 SHANK3Q9BYB0 1731 aa32.61■■■□□ 2.81
PTPN18-213ENST00000489215 TXNRD1Q16881 649 aa32.59■■■□□ 2.81
PTPN18-213ENST00000489215 BTAF1O14981 1849 aa32.57■■■□□ 2.8
PTPN18-213ENST00000489215 CC2D1BQ5T0F9 858 aaKnown RBP32.57■■■□□ 2.8
PTPN18-213ENST00000489215 IGSF1Q8N6C5 1336 aa32.56■■■□□ 2.8
PTPN18-213ENST00000489215 PRIM1P49642 420 aaKnown RBP32.56■■■□□ 2.8
PTPN18-213ENST00000489215 PROM2Q8N271 834 aa32.56■■■□□ 2.8
PTPN18-213ENST00000489215 SYTL4Q96C24 671 aaPredicted RBP32.56■■■□□ 2.8
PTPN18-213ENST00000489215 PKD1L3Q7Z443 1732 aa32.55■■■□□ 2.8
PTPN18-213ENST00000489215 DOT1LQ8TEK3 1739 aa32.52■■■□□ 2.8
PTPN18-213ENST00000489215 MTHFSP49914 203 aa32.52■■■□□ 2.8
PTPN18-213ENST00000489215 CYP27B1O15528 508 aa32.5■■■□□ 2.79
PTPN18-213ENST00000489215 HMGB2P26583 209 aaKnown RBP32.5■■■□□ 2.79
PTPN18-213ENST00000489215 NKX1-1Q15270 411 aaPredicted RBP32.49■■■□□ 2.79
PTPN18-213ENST00000489215 SLC27A3Q5K4L6 730 aa32.49■■■□□ 2.79
PTPN18-213ENST00000489215 IFNL2Q8IZJ0 200 aa32.49■■■□□ 2.79
PTPN18-213ENST00000489215 STK32BQ9NY57 414 aa32.48■■■□□ 2.79
PTPN18-213ENST00000489215 IL13P35225 146 aa32.46■■■□□ 2.79
PTPN18-213ENST00000489215 AMOTQ4VCS5 1084 aa32.46■■■□□ 2.79
PTPN18-213ENST00000489215 PLEKHO1Q53GL0 409 aaPredicted RBP32.46■■■□□ 2.79
PTPN18-213ENST00000489215 LRP5O75197 1615 aa32.46■■■□□ 2.79
PTPN18-213ENST00000489215 HSP90AB1P08238 724 aaKnown RBP32.42■■■□□ 2.78
PTPN18-213ENST00000489215 SLC15A2Q16348 729 aa32.42■■■□□ 2.78
PTPN18-213ENST00000489215 DIAPH1O60610 1272 aaKnown RBP32.41■■■□□ 2.78
PTPN18-213ENST00000489215 PHKG2P15735 406 aa32.41■■■□□ 2.78
PTPN18-213ENST00000489215 SULT6B1Q6IMI4 303 aa32.41■■■□□ 2.78
PTPN18-213ENST00000489215 ANO8Q9HCE9 1232 aaPredicted RBP32.4■■■□□ 2.78
PTPN18-213ENST00000489215 KDRP35968 1356 aa32.4■■■□□ 2.78
PTPN18-213ENST00000489215 CNGB1Q14028 1251 aaPredicted RBP32.39■■■□□ 2.78
PTPN18-213ENST00000489215 MPRIPQ6WCQ1 1025 aa32.39■■■□□ 2.78
PTPN18-213ENST00000489215 SMARCC1Q92922 1105 aaPredicted RBP32.38■■■□□ 2.77
PTPN18-213ENST00000489215 LY75O60449 1722 aa32.37■■■□□ 2.77
PTPN18-213ENST00000489215 ITGB4P16144 1822 aa32.35■■■□□ 2.77
PTPN18-213ENST00000489215 CFAP53Q96M91 514 aa32.35■■■□□ 2.77
PTPN18-213ENST00000489215 LRRC4BQ9NT99 713 aa32.35■■■□□ 2.77
PTPN18-213ENST00000489215 ZEB1P37275 1124 aaPredicted RBP32.34■■■□□ 2.77
PTPN18-213ENST00000489215 AEBP1Q8IUX7 1158 aa32.34■■■□□ 2.77
PTPN18-213ENST00000489215 DCAF5Q96JK2 942 aa32.34■■■□□ 2.77
PTPN18-213ENST00000489215 SPON1Q9HCB6 807 aa32.34■■■□□ 2.77
PTPN18-213ENST00000489215 C1orf141Q5JVX7 400 aa32.33■■■□□ 2.77
PTPN18-213ENST00000489215 TMOD3Q9NYL9 352 aa32.33■■■□□ 2.77
PTPN18-213ENST00000489215 CCNL1Q9UK58 526 aaPredicted RBP32.33■■■□□ 2.77
PTPN18-213ENST00000489215 ZNF530Q6P9A1 599 aaPredicted RBP32.32■■■□□ 2.76
PTPN18-213ENST00000489215 PAPPAQ13219 1627 aa32.32■■■□□ 2.76
PTPN18-213ENST00000489215 ERVV-2B6SEH9 535 aa32.31■■■□□ 2.76
PTPN18-213ENST00000489215 TOGARAM1Q9Y4F4 1720 aa32.31■■■□□ 2.76
PTPN18-213ENST00000489215 PIGBQ92521 554 aa32.3■■■□□ 2.76
PTPN18-213ENST00000489215 PALLDQ8WX93 1383 aa32.29■■■□□ 2.76
PTPN18-213ENST00000489215 SRCAPQ6ZRS2 3230 aa32.28■■■□□ 2.76
PTPN18-213ENST00000489215 CASZ1Q86V15 1759 aa32.27■■■□□ 2.76
PTPN18-213ENST00000489215 AKT1S1Q96B36 256 aa32.26■■■□□ 2.75
PTPN18-213ENST00000489215 NUDCQ9Y266 331 aa32.26■■■□□ 2.75
PTPN18-213ENST00000489215 HMOX1P09601 288 aa32.25■■■□□ 2.75
PTPN18-213ENST00000489215 PPP2R1AP30153 589 aa32.24■■■□□ 2.75
PTPN18-213ENST00000489215 U2SURPO15042 1029 aaKnown RBP32.23■■■□□ 2.75
PTPN18-213ENST00000489215 AKAP4Q5JQC9 854 aa32.23■■■□□ 2.75
PTPN18-213ENST00000489215 TFCP2L1Q9NZI6 479 aa32.23■■■□□ 2.75
PTPN18-213ENST00000489215 COL3A1P02461 1466 aaPredicted RBP32.23■■■□□ 2.75
PTPN18-213ENST00000489215 ZNF827Q17R98 1081 aa32.22■■■□□ 2.75
PTPN18-213ENST00000489215 QSER1Q2KHR3 1735 aa32.22■■■□□ 2.75
PTPN18-213ENST00000489215 SLC16A10Q8TF71 515 aa32.21■■■□□ 2.75
PTPN18-213ENST00000489215 KCNQ4P56696 695 aa32.2■■■□□ 2.75
PTPN18-213ENST00000489215 CABP4P57796 275 aa32.2■■■□□ 2.75
PTPN18-213ENST00000489215 MTFR1LQ9H019 292 aa32.2■■■□□ 2.75
PTPN18-213ENST00000489215 PPP1R1BQ9UD71 204 aaPredicted RBP32.2■■■□□ 2.75
PTPN18-213ENST00000489215 ZBTB7AO95365 584 aa32.17■■■□□ 2.74
PTPN18-213ENST00000489215 PDGFDQ9GZP0 370 aaPredicted RBP32.17■■■□□ 2.74
PTPN18-213ENST00000489215 C5P01031 1676 aa32.16■■■□□ 2.74
PTPN18-213ENST00000489215 LOC102724428A0A0B4J2F2 783 aa32.16■■■□□ 2.74
PTPN18-213ENST00000489215 SIK1P57059 783 aa32.16■■■□□ 2.74
PTPN18-213ENST00000489215 ASAP1Q9ULH1 1129 aa32.16■■■□□ 2.74
PTPN18-213ENST00000489215 FLAD1Q8NFF5 587 aa32.15■■■□□ 2.74
PTPN18-213ENST00000489215 ATG3Q9NT62 314 aa32.15■■■□□ 2.74
PTPN18-213ENST00000489215 KDM6AO15550 1401 aaPredicted RBP32.15■■■□□ 2.74
PTPN18-213ENST00000489215 TAF1LQ8IZX4 1826 aa32.14■■■□□ 2.74
PTPN18-213ENST00000489215 SCN11AQ9UI33 1791 aa32.12■■■□□ 2.73
PTPN18-213ENST00000489215 PNPLA7Q6ZV29 1317 aa32.12■■■□□ 2.73
PTPN18-213ENST00000489215 MTHFSDQ2M296 383 aaKnown RBP32.12■■■□□ 2.73
PTPN18-213ENST00000489215 GAS2L2Q8NHY3 880 aa32.12■■■□□ 2.73
PTPN18-213ENST00000489215 ATF5Q9Y2D1 282 aaPredicted RBP32.12■■■□□ 2.73
PTPN18-213ENST00000489215 DDX10Q13206 875 aaKnown RBP32.11■■■□□ 2.73
PTPN18-213ENST00000489215 RALBP1Q15311 655 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms