RNA–Protein interactions for RNA: ENST00000489113.2

GAPDHP47-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 47, humanhuman

BASIC

Gene GAPDHP47, Length 999 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP47-201ENST00000489113 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
GAPDHP47-201ENST00000489113 CARD14Q9BXL6 1004 aa12.14□□□□□ -0.47
GAPDHP47-201ENST00000489113 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
GAPDHP47-201ENST00000489113 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
GAPDHP47-201ENST00000489113 HMGB2P26583 209 aaKnown RBP12.13□□□□□ -0.47
GAPDHP47-201ENST00000489113 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
GAPDHP47-201ENST00000489113 MON2Q7Z3U7 1717 aa12.13□□□□□ -0.47
GAPDHP47-201ENST00000489113 TNNT2P45379 298 aaPredicted RBP12.12□□□□□ -0.47
GAPDHP47-201ENST00000489113 FLT4P35916 1363 aa12.12□□□□□ -0.47
GAPDHP47-201ENST00000489113 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 INSRP06213 1382 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 POLD1P28340 1107 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 KCNQ4P56696 695 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 ARXQ96QS3 562 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 LRRC4BQ9NT99 713 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 CCNL1Q9UK58 526 aaPredicted RBP12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 EMILIN1Q9Y6C2 1016 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 PEAK1Q9H792 1746 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
GAPDHP47-201ENST00000489113 PTGER2P43116 358 aa12.1□□□□□ -0.47
GAPDHP47-201ENST00000489113 FHDC1Q9C0D6 1143 aaPredicted RBP12.1□□□□□ -0.47
GAPDHP47-201ENST00000489113 SPG7Q9UQ90 795 aa12.1□□□□□ -0.47
GAPDHP47-201ENST00000489113 KIF24Q5T7B8 1368 aa12.09□□□□□ -0.47
GAPDHP47-201ENST00000489113 ZNF827Q17R98 1081 aa12.09□□□□□ -0.47
GAPDHP47-201ENST00000489113 MPRIPQ6WCQ1 1025 aa12.09□□□□□ -0.47
GAPDHP47-201ENST00000489113 SLC16A10Q8TF71 515 aa12.09□□□□□ -0.47
GAPDHP47-201ENST00000489113 SYT17Q9BSW7 474 aa12.09□□□□□ -0.47
GAPDHP47-201ENST00000489113 HSPA5P11021 654 aaKnown RBP12.08□□□□□ -0.48
GAPDHP47-201ENST00000489113 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
GAPDHP47-201ENST00000489113 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.48
GAPDHP47-201ENST00000489113 RREB1Q92766 1687 aa12.07□□□□□ -0.48
GAPDHP47-201ENST00000489113 PANK3Q9H999 370 aa12.07□□□□□ -0.48
GAPDHP47-201ENST00000489113 WASHC2AQ641Q2 1341 aa12.07□□□□□ -0.48
GAPDHP47-201ENST00000489113 GPR162Q16538 588 aa12.06□□□□□ -0.48
GAPDHP47-201ENST00000489113 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
GAPDHP47-201ENST00000489113 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
GAPDHP47-201ENST00000489113 MEGF6O75095 1541 aa12.06□□□□□ -0.48
GAPDHP47-201ENST00000489113 RGPD5Q99666 1765 aa12.05□□□□□ -0.48
GAPDHP47-201ENST00000489113 MORC1Q86VD1 984 aa12.05□□□□□ -0.48
GAPDHP47-201ENST00000489113 EYA1Q99502 592 aa12.05□□□□□ -0.48
GAPDHP47-201ENST00000489113 POLKQ9UBT6 870 aa12.05□□□□□ -0.48
GAPDHP47-201ENST00000489113 KNSTRNQ9Y448 316 aa12.05□□□□□ -0.48
GAPDHP47-201ENST00000489113 USP54Q70EL1 1684 aa12.04□□□□□ -0.48
GAPDHP47-201ENST00000489113 CYP27B1O15528 508 aa12.04□□□□□ -0.48
GAPDHP47-201ENST00000489113 FLAD1Q8NFF5 587 aa12.04□□□□□ -0.48
GAPDHP47-201ENST00000489113 PNPLA7Q6ZV29 1317 aa12.04□□□□□ -0.48
GAPDHP47-201ENST00000489113 LTN1O94822 1766 aa12.03□□□□□ -0.48
GAPDHP47-201ENST00000489113 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
GAPDHP47-201ENST00000489113 AK7Q96M32 723 aa12.03□□□□□ -0.48
GAPDHP47-201ENST00000489113 SGIP1Q9BQI5 828 aa12.03□□□□□ -0.48
GAPDHP47-201ENST00000489113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.03□□□□□ -0.48
GAPDHP47-201ENST00000489113 TMOD3Q9NYL9 352 aa12.03□□□□□ -0.48
GAPDHP47-201ENST00000489113 EIF4A2Q14240 407 aaKnown RBP12.02□□□□□ -0.49
GAPDHP47-201ENST00000489113 PALLDQ8WX93 1383 aa12.02□□□□□ -0.49
GAPDHP47-201ENST00000489113 RGPD3A6NKT7 1758 aaPredicted RBP12.02□□□□□ -0.49
GAPDHP47-201ENST00000489113 RGPD4Q7Z3J3 1758 aa12.02□□□□□ -0.49
GAPDHP47-201ENST00000489113 NHSQ6T4R5 1651 aa12.01□□□□□ -0.49
GAPDHP47-201ENST00000489113 PLEKHO1Q53GL0 409 aaPredicted RBP12.01□□□□□ -0.49
GAPDHP47-201ENST00000489113 COL23A1Q86Y22 540 aaPredicted RBP12.01□□□□□ -0.49
GAPDHP47-201ENST00000489113 PIGBQ92521 554 aa12.01□□□□□ -0.49
GAPDHP47-201ENST00000489113 NSD2O96028 1365 aa12.01□□□□□ -0.49
GAPDHP47-201ENST00000489113 WNK3Q9BYP7 1800 aa12□□□□□ -0.49
GAPDHP47-201ENST00000489113 PHF14O94880 888 aa12□□□□□ -0.49
GAPDHP47-201ENST00000489113 HSP90AB1P08238 724 aaKnown RBP12□□□□□ -0.49
GAPDHP47-201ENST00000489113 NKX1-1Q15270 411 aaPredicted RBP12□□□□□ -0.49
GAPDHP47-201ENST00000489113 MSL1Q68DK7 614 aa12□□□□□ -0.49
GAPDHP47-201ENST00000489113 SBF2Q86WG5 1849 aa12□□□□□ -0.49
GAPDHP47-201ENST00000489113 PHKG2P15735 406 aa11.99□□□□□ -0.49
GAPDHP47-201ENST00000489113 LOC102724428A0A0B4J2F2 783 aa11.98□□□□□ -0.49
GAPDHP47-201ENST00000489113 ATP6V1AP38606 617 aa11.98□□□□□ -0.49
GAPDHP47-201ENST00000489113 SIK1P57059 783 aa11.98□□□□□ -0.49
GAPDHP47-201ENST00000489113 AMOTQ4VCS5 1084 aa11.98□□□□□ -0.49
GAPDHP47-201ENST00000489113 C1orf141Q5JVX7 400 aa11.98□□□□□ -0.49
GAPDHP47-201ENST00000489113 FAM208AQ9UK61 1670 aaKnown RBP11.97□□□□□ -0.49
GAPDHP47-201ENST00000489113 CABP4P57796 275 aa11.97□□□□□ -0.49
GAPDHP47-201ENST00000489113 ZNF530Q6P9A1 599 aaPredicted RBP11.97□□□□□ -0.49
GAPDHP47-201ENST00000489113 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
GAPDHP47-201ENST00000489113 ASAP1Q9ULH1 1129 aa11.97□□□□□ -0.49
GAPDHP47-201ENST00000489113 MAP3K5Q99683 1374 aa11.96□□□□□ -0.49
GAPDHP47-201ENST00000489113 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.96□□□□□ -0.49
GAPDHP47-201ENST00000489113 MTHFSP49914 203 aa11.96□□□□□ -0.49
GAPDHP47-201ENST00000489113 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.49
GAPDHP47-201ENST00000489113 DCAF5Q96JK2 942 aa11.96□□□□□ -0.49
GAPDHP47-201ENST00000489113 ERVV-2B6SEH9 535 aa11.95□□□□□ -0.5
GAPDHP47-201ENST00000489113 ZBTB22O15209 634 aa11.95□□□□□ -0.5
GAPDHP47-201ENST00000489113 GNPATO15228 680 aa11.95□□□□□ -0.5
GAPDHP47-201ENST00000489113 GRIN3BO60391 1043 aa11.95□□□□□ -0.5
GAPDHP47-201ENST00000489113 SULT6B1Q6IMI4 303 aa11.95□□□□□ -0.5
GAPDHP47-201ENST00000489113 NLGN2Q8NFZ4 835 aa11.95□□□□□ -0.5
GAPDHP47-201ENST00000489113 BTAF1O14981 1849 aa11.95□□□□□ -0.5
GAPDHP47-201ENST00000489113 CASZ1Q86V15 1759 aa11.95□□□□□ -0.5
GAPDHP47-201ENST00000489113 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
GAPDHP47-201ENST00000489113 SSFA2P28290 1259 aa11.94□□□□□ -0.5
GAPDHP47-201ENST00000489113 ZNF784Q8NCA9 323 aaPredicted RBP11.94□□□□□ -0.5
GAPDHP47-201ENST00000489113 ATG3Q9NT62 314 aa11.94□□□□□ -0.5
GAPDHP47-201ENST00000489113 TRAPPC3LQ5T215 181 aa11.93□□□□□ -0.5
GAPDHP47-201ENST00000489113 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
GAPDHP47-201ENST00000489113 RTCBQ9Y3I0 505 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms