RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 GTPBP3Q969Y2 492 aaKnown RBP6.38□□□□□ -1.39
PRPF4-203ENST00000488937 C1QTNF2Q9BXJ5 285 aa6.38□□□□□ -1.39
PRPF4-203ENST00000488937 GPCPD1Q9NPB8 672 aa6.38□□□□□ -1.39
PRPF4-203ENST00000488937 GDF2Q9UK05 429 aaPredicted RBP6.38□□□□□ -1.39
PRPF4-203ENST00000488937 CTHP32929 405 aa6.37□□□□□ -1.39
PRPF4-203ENST00000488937 PRPF38BQ5VTL8 546 aaKnown RBP6.37□□□□□ -1.39
PRPF4-203ENST00000488937 TPSG1Q9NRR2 321 aa6.37□□□□□ -1.39
PRPF4-203ENST00000488937 MINK1Q8N4C8 1332 aaPredicted RBP6.36□□□□□ -1.39
PRPF4-203ENST00000488937 H7C1W4 665 aa6.36□□□□□ -1.39
PRPF4-203ENST00000488937 IRF6O14896 467 aa6.36□□□□□ -1.39
PRPF4-203ENST00000488937 TRMT44Q8IYL2 757 aaKnown RBP6.36□□□□□ -1.39
PRPF4-203ENST00000488937 KRI1Q8N9T8 703 aaKnown RBP6.36□□□□□ -1.39
PRPF4-203ENST00000488937 AGBL1Q96MI9 1066 aa6.36□□□□□ -1.39
PRPF4-203ENST00000488937 RELBQ01201 579 aa6.35□□□□□ -1.39
PRPF4-203ENST00000488937 LYSMD3Q7Z3D4 306 aa6.35□□□□□ -1.39
PRPF4-203ENST00000488937 FAM217BQ9NTX9 383 aaPredicted RBP6.35□□□□□ -1.39
PRPF4-203ENST00000488937 PCDHGC3Q9UN70 934 aa6.35□□□□□ -1.39
PRPF4-203ENST00000488937 AMPD1P23109 780 aa6.34□□□□□ -1.39
PRPF4-203ENST00000488937 FOXD4L5Q5VV16 416 aaPredicted RBP6.34□□□□□ -1.39
PRPF4-203ENST00000488937 RIPOR1Q6ZS17 1223 aa6.33□□□□□ -1.4
PRPF4-203ENST00000488937 PRR7Q8TB68 274 aa6.33□□□□□ -1.4
PRPF4-203ENST00000488937 KLRG1Q96E93 195 aa6.33□□□□□ -1.4
PRPF4-203ENST00000488937 DGKGP49619 791 aa6.32□□□□□ -1.4
PRPF4-203ENST00000488937 MTMR2Q13614 643 aa6.32□□□□□ -1.4
PRPF4-203ENST00000488937 GOLGA6L1Q8N7Z2 621 aa6.32□□□□□ -1.4
PRPF4-203ENST00000488937 GIGYF2Q6Y7W6 1299 aaKnown RBP6.31□□□□□ -1.4
PRPF4-203ENST00000488937 ZNF395Q9H8N7 513 aaPredicted RBP6.31□□□□□ -1.4
PRPF4-203ENST00000488937 LYPD8Q6UX82 237 aa6.3□□□□□ -1.4
PRPF4-203ENST00000488937 C14orf37Q86TY3 774 aa6.3□□□□□ -1.4
PRPF4-203ENST00000488937 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
PRPF4-203ENST00000488937 SPATA31C1P0DKV0 1188 aa6.29□□□□□ -1.4
PRPF4-203ENST00000488937 F12P00748 615 aaPredicted RBP6.28□□□□□ -1.4
PRPF4-203ENST00000488937 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRPF4-203ENST00000488937 ARMC2Q8NEN0 867 aa6.28□□□□□ -1.4
PRPF4-203ENST00000488937 CCDC102AQ96A19 550 aa6.28□□□□□ -1.4
PRPF4-203ENST00000488937 CFHR5Q9BXR6 569 aa6.28□□□□□ -1.4
PRPF4-203ENST00000488937 DYRK1BQ9Y463 629 aa6.28□□□□□ -1.4
PRPF4-203ENST00000488937 ELNP15502 786 aa6.27□□□□□ -1.41
PRPF4-203ENST00000488937 GJA5P36382 358 aa6.27□□□□□ -1.41
PRPF4-203ENST00000488937 DHX9Q08211 1270 aaKnown RBP6.27□□□□□ -1.41
PRPF4-203ENST00000488937 DIXDC1Q155Q3 683 aa6.27□□□□□ -1.41
PRPF4-203ENST00000488937 SLCO4C1Q6ZQN7 724 aa6.27□□□□□ -1.41
PRPF4-203ENST00000488937 SPIRE2Q8WWL2 714 aa6.27□□□□□ -1.41
PRPF4-203ENST00000488937 BTBD6Q96KE9 485 aa6.27□□□□□ -1.41
PRPF4-203ENST00000488937 MAP10Q9P2G4 905 aa6.27□□□□□ -1.41
PRPF4-203ENST00000488937 RHOQP17081 205 aa6.26□□□□□ -1.41
PRPF4-203ENST00000488937 PRICKLE2Q7Z3G6 844 aa6.26□□□□□ -1.41
PRPF4-203ENST00000488937 RIC3Q7Z5B4 369 aa6.26□□□□□ -1.41
PRPF4-203ENST00000488937 H2AFB1P0C5Y9 115 aa6.25□□□□□ -1.41
PRPF4-203ENST00000488937 H2AFB2P0C5Z0 115 aa6.25□□□□□ -1.41
PRPF4-203ENST00000488937 JAG1P78504 1218 aa6.24□□□□□ -1.41
PRPF4-203ENST00000488937 NBPF14Q5TI25 921 aa6.24□□□□□ -1.41
PRPF4-203ENST00000488937 RNF114Q9Y508 228 aa6.24□□□□□ -1.41
PRPF4-203ENST00000488937 MOXD2PA6NHM9 499 aa6.23□□□□□ -1.41
PRPF4-203ENST00000488937 NDUFV2P19404 249 aa6.23□□□□□ -1.41
PRPF4-203ENST00000488937 SSTR3P32745 418 aaPredicted RBP6.23□□□□□ -1.41
PRPF4-203ENST00000488937 RNF144AP50876 292 aaPredicted RBP6.23□□□□□ -1.41
PRPF4-203ENST00000488937 EPXP11678 715 aa6.22□□□□□ -1.41
PRPF4-203ENST00000488937 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
PRPF4-203ENST00000488937 SH3BP5LQ7L8J4 393 aa6.22□□□□□ -1.41
PRPF4-203ENST00000488937 NUCKS1Q9H1E3 243 aaKnown RBP6.22□□□□□ -1.41
PRPF4-203ENST00000488937 GAS2L1Q99501 681 aaPredicted RBP6.21□□□□□ -1.42
PRPF4-203ENST00000488937 ZBTB3Q9H5J0 574 aa6.21□□□□□ -1.42
PRPF4-203ENST00000488937 GGA1Q9UJY5 639 aa6.21□□□□□ -1.42
PRPF4-203ENST00000488937 ADH1AP07327 375 aa6.2□□□□□ -1.42
PRPF4-203ENST00000488937 PTGIRP43119 386 aa6.2□□□□□ -1.42
PRPF4-203ENST00000488937 PODXL2Q9NZ53 605 aa6.2□□□□□ -1.42
PRPF4-203ENST00000488937 PHF24Q9UPV7 400 aa6.2□□□□□ -1.42
PRPF4-203ENST00000488937 MAGEB6P1A0A0J9YX57 407 aa6.19□□□□□ -1.42
PRPF4-203ENST00000488937 RANGAP1P46060 587 aaPredicted RBP6.19□□□□□ -1.42
PRPF4-203ENST00000488937 IRAK1P51617 712 aa6.19□□□□□ -1.42
PRPF4-203ENST00000488937 TTLL12Q14166 644 aaPredicted RBP6.19□□□□□ -1.42
PRPF4-203ENST00000488937 KDF1Q8NAX2 398 aaPredicted RBP6.19□□□□□ -1.42
PRPF4-203ENST00000488937 GPKOWQ92917 476 aaPredicted RBP eCLIP6.19□□□□□ -1.42
PRPF4-203ENST00000488937 TRIM11Q96F44 468 aa6.19□□□□□ -1.42
PRPF4-203ENST00000488937 KCTD15Q96SI1 283 aaPredicted RBP6.18□□□□□ -1.42
PRPF4-203ENST00000488937 PLVAPQ9BX97 442 aa6.18□□□□□ -1.42
PRPF4-203ENST00000488937 CDV3Q9UKY7 258 aaKnown RBP6.18□□□□□ -1.42
PRPF4-203ENST00000488937 CFAP99D6REC4 459 aa6.17□□□□□ -1.42
PRPF4-203ENST00000488937 APBA3O96018 575 aa6.17□□□□□ -1.42
PRPF4-203ENST00000488937 TAL1P17542 331 aaPredicted RBP6.17□□□□□ -1.42
PRPF4-203ENST00000488937 ERFEQ4G0M1 354 aa6.17□□□□□ -1.42
PRPF4-203ENST00000488937 RSBN1LQ6PCB5 846 aaPredicted RBP6.17□□□□□ -1.42
PRPF4-203ENST00000488937 CCER1Q8TC90 406 aaPredicted RBP6.17□□□□□ -1.42
PRPF4-203ENST00000488937 ZC3H15Q8WU90 426 aaKnown RBP6.17□□□□□ -1.42
PRPF4-203ENST00000488937 ZMYND10O75800 440 aa6.16□□□□□ -1.42
PRPF4-203ENST00000488937 RNF135Q8IUD6 432 aa6.16□□□□□ -1.42
PRPF4-203ENST00000488937 RNF112Q9ULX5 631 aa6.16□□□□□ -1.42
PRPF4-203ENST00000488937 BMP4P12644 408 aa6.15□□□□□ -1.42
PRPF4-203ENST00000488937 GPC1P35052 558 aa6.15□□□□□ -1.42
PRPF4-203ENST00000488937 BARGINQ6ZT62 677 aa6.15□□□□□ -1.42
PRPF4-203ENST00000488937 CHSY3Q70JA7 882 aa6.15□□□□□ -1.42
PRPF4-203ENST00000488937 TRIM52Q96A61 297 aa6.15□□□□□ -1.42
PRPF4-203ENST00000488937 BEGAINQ9BUH8 593 aa6.15□□□□□ -1.42
PRPF4-203ENST00000488937 SPDYE3A6NKU9 549 aa6.14□□□□□ -1.43
PRPF4-203ENST00000488937 F11P03951 625 aa6.14□□□□□ -1.43
PRPF4-203ENST00000488937 HRCP23327 699 aa6.14□□□□□ -1.43
PRPF4-203ENST00000488937 INTS6LQ5JSJ4 861 aaKnown RBP6.14□□□□□ -1.43
PRPF4-203ENST00000488937 TBC1D2Q9BYX2 928 aa6.14□□□□□ -1.43
PRPF4-203ENST00000488937 C2CD2LO14523 706 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms