RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PKD1L3Q7Z443 1732 aa19■□□□□ 0.63
SPTLC1-207ENST00000488921 KCNQ2O43526 872 aa18.99■□□□□ 0.63
SPTLC1-207ENST00000488921 ZCRB1Q8TBF4 217 aaKnown RBP18.99■□□□□ 0.63
SPTLC1-207ENST00000488921 PANK3Q9H999 370 aa18.98■□□□□ 0.63
SPTLC1-207ENST00000488921 CASZ1Q86V15 1759 aa18.98■□□□□ 0.63
SPTLC1-207ENST00000488921 PPM1GO15355 546 aaPredicted RBP18.97■□□□□ 0.63
SPTLC1-207ENST00000488921 TATP17735 454 aaPredicted RBP18.97■□□□□ 0.63
SPTLC1-207ENST00000488921 TXNRD1Q16881 649 aa18.97■□□□□ 0.63
SPTLC1-207ENST00000488921 USHBP1Q8N6Y0 703 aa18.97■□□□□ 0.63
SPTLC1-207ENST00000488921 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
SPTLC1-207ENST00000488921 NCAPD2Q15021 1401 aa18.96■□□□□ 0.63
SPTLC1-207ENST00000488921 PAPPAQ13219 1627 aa18.96■□□□□ 0.63
SPTLC1-207ENST00000488921 LY75O60449 1722 aa18.95■□□□□ 0.62
SPTLC1-207ENST00000488921 PROM2Q8N271 834 aa18.95■□□□□ 0.62
SPTLC1-207ENST00000488921 PCDH11XQ9BZA7 1347 aa18.95■□□□□ 0.62
SPTLC1-207ENST00000488921 PCDH11YQ9BZA8 1340 aa18.95■□□□□ 0.62
SPTLC1-207ENST00000488921 ANO8Q9HCE9 1232 aaPredicted RBP18.94■□□□□ 0.62
SPTLC1-207ENST00000488921 STK32BQ9NY57 414 aa18.93■□□□□ 0.62
SPTLC1-207ENST00000488921 POLKQ9UBT6 870 aa18.93■□□□□ 0.62
SPTLC1-207ENST00000488921 KNSTRNQ9Y448 316 aa18.92■□□□□ 0.62
SPTLC1-207ENST00000488921 KIF7Q2M1P5 1343 aa18.92■□□□□ 0.62
SPTLC1-207ENST00000488921 QSER1Q2KHR3 1735 aa18.91■□□□□ 0.62
SPTLC1-207ENST00000488921 TNNT2P45379 298 aaPredicted RBP18.91■□□□□ 0.62
SPTLC1-207ENST00000488921 SYTL4Q96C24 671 aaPredicted RBP18.91■□□□□ 0.62
SPTLC1-207ENST00000488921 SPON1Q9HCB6 807 aa18.9■□□□□ 0.62
SPTLC1-207ENST00000488921 ITGB4P16144 1822 aa18.9■□□□□ 0.62
SPTLC1-207ENST00000488921 PLEKHG2Q9H7P9 1386 aa18.9■□□□□ 0.62
SPTLC1-207ENST00000488921 TOGARAM1Q9Y4F4 1720 aa18.89■□□□□ 0.61
SPTLC1-207ENST00000488921 SLC15A2Q16348 729 aa18.89■□□□□ 0.61
SPTLC1-207ENST00000488921 PRIM1P49642 420 aaKnown RBP18.88■□□□□ 0.61
SPTLC1-207ENST00000488921 SLC27A3Q5K4L6 730 aa18.88■□□□□ 0.61
SPTLC1-207ENST00000488921 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
SPTLC1-207ENST00000488921 EIF4A2Q14240 407 aaKnown RBP18.86■□□□□ 0.61
SPTLC1-207ENST00000488921 EYA1Q99502 592 aa18.86■□□□□ 0.61
SPTLC1-207ENST00000488921 SPG7Q9UQ90 795 aa18.86■□□□□ 0.61
SPTLC1-207ENST00000488921 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.85■□□□□ 0.61
SPTLC1-207ENST00000488921 PPP1R1BQ9UD71 204 aaPredicted RBP18.85■□□□□ 0.61
SPTLC1-207ENST00000488921 TUBGCP6Q96RT7 1819 aa18.85■□□□□ 0.61
SPTLC1-207ENST00000488921 C5P01031 1676 aa18.84■□□□□ 0.61
SPTLC1-207ENST00000488921 IGSF1Q8N6C5 1336 aa18.83■□□□□ 0.61
SPTLC1-207ENST00000488921 CYP27B1O15528 508 aa18.83■□□□□ 0.6
SPTLC1-207ENST00000488921 LRRC4BQ9NT99 713 aa18.83■□□□□ 0.6
SPTLC1-207ENST00000488921 TAF1LQ8IZX4 1826 aa18.82■□□□□ 0.6
SPTLC1-207ENST00000488921 HMGB2P26583 209 aaKnown RBP18.82■□□□□ 0.6
SPTLC1-207ENST00000488921 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
SPTLC1-207ENST00000488921 NKX1-1Q15270 411 aaPredicted RBP18.8■□□□□ 0.6
SPTLC1-207ENST00000488921 MTFR1LQ9H019 292 aa18.8■□□□□ 0.6
SPTLC1-207ENST00000488921 ZBTB7AO95365 584 aa18.79■□□□□ 0.6
SPTLC1-207ENST00000488921 ZNF827Q17R98 1081 aa18.79■□□□□ 0.6
SPTLC1-207ENST00000488921 IFNL2Q8IZJ0 200 aa18.79■□□□□ 0.6
SPTLC1-207ENST00000488921 PDGFDQ9GZP0 370 aaPredicted RBP18.79■□□□□ 0.6
SPTLC1-207ENST00000488921 CCNL1Q9UK58 526 aaPredicted RBP18.79■□□□□ 0.6
SPTLC1-207ENST00000488921 MPRIPQ6WCQ1 1025 aa18.78■□□□□ 0.6
SPTLC1-207ENST00000488921 AKT1S1Q96B36 256 aa18.78■□□□□ 0.6
SPTLC1-207ENST00000488921 PALLDQ8WX93 1383 aa18.78■□□□□ 0.6
SPTLC1-207ENST00000488921 PER1O15534 1290 aaPredicted RBP18.77■□□□□ 0.6
SPTLC1-207ENST00000488921 SMARCC1Q92922 1105 aaPredicted RBP18.77■□□□□ 0.6
SPTLC1-207ENST00000488921 NPC1L1Q9UHC9 1359 aa18.77■□□□□ 0.6
SPTLC1-207ENST00000488921 COL24A1Q17RW2 1714 aa18.77■□□□□ 0.59
SPTLC1-207ENST00000488921 PHKG2P15735 406 aa18.76■□□□□ 0.59
SPTLC1-207ENST00000488921 TFCP2L1Q9NZI6 479 aa18.75■□□□□ 0.59
SPTLC1-207ENST00000488921 ATF5Q9Y2D1 282 aaPredicted RBP18.75■□□□□ 0.59
SPTLC1-207ENST00000488921 KDRP35968 1356 aa18.74■□□□□ 0.59
SPTLC1-207ENST00000488921 HSP90AB1P08238 724 aaKnown RBP18.74■□□□□ 0.59
SPTLC1-207ENST00000488921 PTGER2P43116 358 aa18.74■□□□□ 0.59
SPTLC1-207ENST00000488921 AMOTQ4VCS5 1084 aa18.74■□□□□ 0.59
SPTLC1-207ENST00000488921 PLEKHO1Q53GL0 409 aaPredicted RBP18.74■□□□□ 0.59
SPTLC1-207ENST00000488921 SLC16A10Q8TF71 515 aa18.74■□□□□ 0.59
SPTLC1-207ENST00000488921 TMOD3Q9NYL9 352 aa18.74■□□□□ 0.59
SPTLC1-207ENST00000488921 C4BP0C0L5 1744 aa18.74■□□□□ 0.59
SPTLC1-207ENST00000488921 KCNQ4P56696 695 aa18.73■□□□□ 0.59
SPTLC1-207ENST00000488921 CC2D1BQ5T0F9 858 aaKnown RBP18.73■□□□□ 0.59
SPTLC1-207ENST00000488921 PNPLA7Q6ZV29 1317 aa18.73■□□□□ 0.59
SPTLC1-207ENST00000488921 VIRMAQ69YN4 1812 aaKnown RBP18.72■□□□□ 0.59
SPTLC1-207ENST00000488921 ZNF831Q5JPB2 1677 aa18.71■□□□□ 0.59
SPTLC1-207ENST00000488921 IL13P35225 146 aa18.71■□□□□ 0.59
SPTLC1-207ENST00000488921 MTHFSP49914 203 aa18.71■□□□□ 0.59
SPTLC1-207ENST00000488921 PIGBQ92521 554 aa18.71■□□□□ 0.59
SPTLC1-207ENST00000488921 SCN11AQ9UI33 1791 aa18.7■□□□□ 0.58
SPTLC1-207ENST00000488921 DCAF8L1A6NGE4 600 aa18.7■□□□□ 0.58
SPTLC1-207ENST00000488921 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
SPTLC1-207ENST00000488921 ZNF530Q6P9A1 599 aaPredicted RBP18.7■□□□□ 0.58
SPTLC1-207ENST00000488921 UBR3Q6ZT12 1888 aa18.7■□□□□ 0.58
SPTLC1-207ENST00000488921 DCAF5Q96JK2 942 aa18.7■□□□□ 0.58
SPTLC1-207ENST00000488921 SGIP1Q9BQI5 828 aa18.7■□□□□ 0.58
SPTLC1-207ENST00000488921 ERVV-2B6SEH9 535 aa18.69■□□□□ 0.58
SPTLC1-207ENST00000488921 C1orf141Q5JVX7 400 aa18.69■□□□□ 0.58
SPTLC1-207ENST00000488921 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
SPTLC1-207ENST00000488921 KDM6AO15550 1401 aaPredicted RBP18.67■□□□□ 0.58
SPTLC1-207ENST00000488921 POLD1P28340 1107 aa18.67■□□□□ 0.58
SPTLC1-207ENST00000488921 FLAD1Q8NFF5 587 aa18.67■□□□□ 0.58
SPTLC1-207ENST00000488921 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
SPTLC1-207ENST00000488921 ARXQ96QS3 562 aa18.66■□□□□ 0.58
SPTLC1-207ENST00000488921 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
SPTLC1-207ENST00000488921 COL5A3P25940 1745 aaPredicted RBP18.66■□□□□ 0.58
SPTLC1-207ENST00000488921 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
SPTLC1-207ENST00000488921 LOC102724428A0A0B4J2F2 783 aa18.65■□□□□ 0.58
SPTLC1-207ENST00000488921 SIK1P57059 783 aa18.65■□□□□ 0.58
SPTLC1-207ENST00000488921 AK7Q96M32 723 aa18.65■□□□□ 0.58
SPTLC1-207ENST00000488921 MSH5O43196 834 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms