RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 TATP17735 454 aaPredicted RBP16.46■□□□□ 0.23
CCHCR1-215ENST00000488920 SLC15A2Q16348 729 aa16.46■□□□□ 0.23
CCHCR1-215ENST00000488920 KIF24Q5T7B8 1368 aa16.46■□□□□ 0.23
CCHCR1-215ENST00000488920 RGPD3A6NKT7 1758 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-215ENST00000488920 RGPD4Q7Z3J3 1758 aa16.44■□□□□ 0.22
CCHCR1-215ENST00000488920 FAM208AQ9UK61 1670 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-215ENST00000488920 ZBTB7AO95365 584 aa16.44■□□□□ 0.22
CCHCR1-215ENST00000488920 LRRC4BQ9NT99 713 aa16.44■□□□□ 0.22
CCHCR1-215ENST00000488920 POLKQ9UBT6 870 aa16.44■□□□□ 0.22
CCHCR1-215ENST00000488920 PPP1R1BQ9UD71 204 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-215ENST00000488920 NHSQ6T4R5 1651 aa16.43■□□□□ 0.22
CCHCR1-215ENST00000488920 KIF20BQ96Q89 1820 aa16.43■□□□□ 0.22
CCHCR1-215ENST00000488920 WASHC2AQ641Q2 1341 aa16.43■□□□□ 0.22
CCHCR1-215ENST00000488920 RGPD2P0DJD1 1756 aa16.42■□□□□ 0.22
CCHCR1-215ENST00000488920 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-215ENST00000488920 KCNQ4P56696 695 aa16.41■□□□□ 0.22
CCHCR1-215ENST00000488920 EYA1Q99502 592 aa16.4■□□□□ 0.22
CCHCR1-215ENST00000488920 CYP27B1O15528 508 aa16.39■□□□□ 0.21
CCHCR1-215ENST00000488920 ZNF827Q17R98 1081 aa16.39■□□□□ 0.21
CCHCR1-215ENST00000488920 SLC27A3Q5K4L6 730 aa16.39■□□□□ 0.21
CCHCR1-215ENST00000488920 PCDH11XQ9BZA7 1347 aa16.39■□□□□ 0.21
CCHCR1-215ENST00000488920 PCDH11YQ9BZA8 1340 aa16.39■□□□□ 0.21
CCHCR1-215ENST00000488920 NSD2O96028 1365 aa16.38■□□□□ 0.21
CCHCR1-215ENST00000488920 BTAF1O14981 1849 aa16.38■□□□□ 0.21
CCHCR1-215ENST00000488920 PTGER2P43116 358 aa16.37■□□□□ 0.21
CCHCR1-215ENST00000488920 EIF4A2Q14240 407 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-215ENST00000488920 MORC1Q86VD1 984 aa16.37■□□□□ 0.21
CCHCR1-215ENST00000488920 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
CCHCR1-215ENST00000488920 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
CCHCR1-215ENST00000488920 SPG7Q9UQ90 795 aa16.36■□□□□ 0.21
CCHCR1-215ENST00000488920 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
CCHCR1-215ENST00000488920 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
CCHCR1-215ENST00000488920 MTFR1LQ9H019 292 aa16.35■□□□□ 0.21
CCHCR1-215ENST00000488920 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
CCHCR1-215ENST00000488920 KIF7Q2M1P5 1343 aa16.35■□□□□ 0.21
CCHCR1-215ENST00000488920 TFCP2L1Q9NZI6 479 aa16.34■□□□□ 0.21
CCHCR1-215ENST00000488920 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.21
CCHCR1-215ENST00000488920 CASZ1Q86V15 1759 aa16.33■□□□□ 0.21
CCHCR1-215ENST00000488920 NCAPD2Q15021 1401 aa16.33■□□□□ 0.2
CCHCR1-215ENST00000488920 NKX1-1Q15270 411 aaPredicted RBP16.32■□□□□ 0.2
CCHCR1-215ENST00000488920 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCHCR1-215ENST00000488920 DOT1LQ8TEK3 1739 aa16.31■□□□□ 0.2
CCHCR1-215ENST00000488920 PAPPAQ13219 1627 aa16.31■□□□□ 0.2
CCHCR1-215ENST00000488920 AMER1Q5JTC6 1135 aaPredicted RBP16.31■□□□□ 0.2
CCHCR1-215ENST00000488920 PIGBQ92521 554 aa16.31■□□□□ 0.2
CCHCR1-215ENST00000488920 SGIP1Q9BQI5 828 aa16.31■□□□□ 0.2
CCHCR1-215ENST00000488920 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-215ENST00000488920 PNPLA7Q6ZV29 1317 aa16.3■□□□□ 0.2
CCHCR1-215ENST00000488920 IGSF1Q8N6C5 1336 aa16.29■□□□□ 0.2
CCHCR1-215ENST00000488920 ANKRD26Q9UPS8 1709 aa16.29■□□□□ 0.2
CCHCR1-215ENST00000488920 PHKG2P15735 406 aa16.29■□□□□ 0.2
CCHCR1-215ENST00000488920 IFNL2Q8IZJ0 200 aa16.29■□□□□ 0.2
CCHCR1-215ENST00000488920 ARXQ96QS3 562 aa16.29■□□□□ 0.2
CCHCR1-215ENST00000488920 FHDC1Q9C0D6 1143 aaPredicted RBP16.29■□□□□ 0.2
CCHCR1-215ENST00000488920 PALLDQ8WX93 1383 aa16.28■□□□□ 0.2
CCHCR1-215ENST00000488920 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
CCHCR1-215ENST00000488920 MSH5O43196 834 aa16.28■□□□□ 0.2
CCHCR1-215ENST00000488920 SLC16A10Q8TF71 515 aa16.28■□□□□ 0.2
CCHCR1-215ENST00000488920 SMARCC1Q92922 1105 aaPredicted RBP16.27■□□□□ 0.2
CCHCR1-215ENST00000488920 SYT17Q9BSW7 474 aa16.27■□□□□ 0.2
CCHCR1-215ENST00000488920 PER1O15534 1290 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-215ENST00000488920 COL23A1Q86Y22 540 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-215ENST00000488920 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
CCHCR1-215ENST00000488920 TMOD3Q9NYL9 352 aa16.26■□□□□ 0.19
CCHCR1-215ENST00000488920 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-215ENST00000488920 PLEKHO1Q53GL0 409 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-215ENST00000488920 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
CCHCR1-215ENST00000488920 ASAP1Q9ULH1 1129 aa16.25■□□□□ 0.19
CCHCR1-215ENST00000488920 IL13P35225 146 aa16.24■□□□□ 0.19
CCHCR1-215ENST00000488920 MTHFSP49914 203 aa16.24■□□□□ 0.19
CCHCR1-215ENST00000488920 SULT6B1Q6IMI4 303 aa16.24■□□□□ 0.19
CCHCR1-215ENST00000488920 PKD1L3Q7Z443 1732 aa16.24■□□□□ 0.19
CCHCR1-215ENST00000488920 LY75O60449 1722 aa16.23■□□□□ 0.19
CCHCR1-215ENST00000488920 POLD1P28340 1107 aa16.23■□□□□ 0.19
CCHCR1-215ENST00000488920 ZNF530Q6P9A1 599 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-215ENST00000488920 LOC102724428A0A0B4J2F2 783 aa16.22■□□□□ 0.19
CCHCR1-215ENST00000488920 HMGB2P26583 209 aaKnown RBP16.22■□□□□ 0.19
CCHCR1-215ENST00000488920 SIK1P57059 783 aa16.22■□□□□ 0.19
CCHCR1-215ENST00000488920 AMOTQ4VCS5 1084 aa16.22■□□□□ 0.19
CCHCR1-215ENST00000488920 KLHL34Q8N239 644 aa16.22■□□□□ 0.19
CCHCR1-215ENST00000488920 ATG3Q9NT62 314 aa16.22■□□□□ 0.19
CCHCR1-215ENST00000488920 HSP90AB1P08238 724 aaKnown RBP16.21■□□□□ 0.19
CCHCR1-215ENST00000488920 MSL1Q68DK7 614 aa16.21■□□□□ 0.19
CCHCR1-215ENST00000488920 SMIM5Q71RC9 77 aa16.21■□□□□ 0.19
CCHCR1-215ENST00000488920 DCAF5Q96JK2 942 aa16.21■□□□□ 0.19
CCHCR1-215ENST00000488920 AK7Q96M32 723 aa16.21■□□□□ 0.19
CCHCR1-215ENST00000488920 TOGARAM1Q9Y4F4 1720 aa16.21■□□□□ 0.19
CCHCR1-215ENST00000488920 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
CCHCR1-215ENST00000488920 YY1P25490 414 aa16.2■□□□□ 0.18
CCHCR1-215ENST00000488920 AMIGO3Q86WK7 504 aa16.2■□□□□ 0.18
CCHCR1-215ENST00000488920 PLEKHG2Q9H7P9 1386 aa16.19■□□□□ 0.18
CCHCR1-215ENST00000488920 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
CCHCR1-215ENST00000488920 ITPK1Q13572 414 aa16.19■□□□□ 0.18
CCHCR1-215ENST00000488920 C1orf141Q5JVX7 400 aa16.19■□□□□ 0.18
CCHCR1-215ENST00000488920 LINC00116Q8NCU8 138 aa16.19■□□□□ 0.18
CCHCR1-215ENST00000488920 FLAD1Q8NFF5 587 aa16.19■□□□□ 0.18
CCHCR1-215ENST00000488920 PHF14O94880 888 aa16.18■□□□□ 0.18
CCHCR1-215ENST00000488920 CABP4P57796 275 aa16.18■□□□□ 0.18
CCHCR1-215ENST00000488920 HMOX1P09601 288 aa16.17■□□□□ 0.18
CCHCR1-215ENST00000488920 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms