RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 EP400Q96L91 3159 aa15.14■□□□□ 0.01
ARHGEF39-204ENST00000488918 KCNQ2O43526 872 aa15.13■□□□□ 0.01
ARHGEF39-204ENST00000488918 HMGB2P26583 209 aaKnown RBP15.13■□□□□ 0.01
ARHGEF39-204ENST00000488918 EYA1Q99502 592 aa15.13■□□□□ 0.01
ARHGEF39-204ENST00000488918 PRIM1P49642 420 aaKnown RBP15.12■□□□□ 0.01
ARHGEF39-204ENST00000488918 CFAP53Q96M91 514 aa15.12■□□□□ 0.01
ARHGEF39-204ENST00000488918 MTHFSP49914 203 aa15.11■□□□□ 0.01
ARHGEF39-204ENST00000488918 STK32BQ9NY57 414 aa15.11■□□□□ 0.01
ARHGEF39-204ENST00000488918 ANKRD26Q9UPS8 1709 aa15.11■□□□□ 0.01
ARHGEF39-204ENST00000488918 MEGF6O75095 1541 aa15.11■□□□□ 0.01
ARHGEF39-204ENST00000488918 PEAK1Q9H792 1746 aa15.1■□□□□ 0.01
ARHGEF39-204ENST00000488918 TNS1Q9HBL0 1735 aaKnown RBP15.1■□□□□ 0.01
ARHGEF39-204ENST00000488918 PER1O15534 1290 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF39-204ENST00000488918 TXNRD1Q16881 649 aa15.1■□□□□ 0.01
ARHGEF39-204ENST00000488918 PLEKHO1Q53GL0 409 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF39-204ENST00000488918 MAP2P11137 1827 aaKnown RBP15.09■□□□□ 0.01
ARHGEF39-204ENST00000488918 C1orf141Q5JVX7 400 aa15.09■□□□□ 0.01
ARHGEF39-204ENST00000488918 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
ARHGEF39-204ENST00000488918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.09■□□□□ 0.01
ARHGEF39-204ENST00000488918 DIAPH1O60610 1272 aaKnown RBP15.08■□□□□ 0
ARHGEF39-204ENST00000488918 HSP90AB1P08238 724 aaKnown RBP15.08■□□□□ 0
ARHGEF39-204ENST00000488918 AMOTQ4VCS5 1084 aa15.08■□□□□ 0
ARHGEF39-204ENST00000488918 PTF1AQ7RTS3 328 aa15.08■□□□□ 0
ARHGEF39-204ENST00000488918 NPC1L1Q9UHC9 1359 aa15.08■□□□□ 0
ARHGEF39-204ENST00000488918 SULT6B1Q6IMI4 303 aa15.07■□□□□ 0
ARHGEF39-204ENST00000488918 MPRIPQ6WCQ1 1025 aa15.07■□□□□ 0
ARHGEF39-204ENST00000488918 U2SURPO15042 1029 aaKnown RBP15.06■□□□□ 0
ARHGEF39-204ENST00000488918 SLC27A3Q5K4L6 730 aa15.06■□□□□ 0
ARHGEF39-204ENST00000488918 NUDCQ9Y266 331 aa15.06■□□□□ 0
ARHGEF39-204ENST00000488918 IGSF1Q8N6C5 1336 aa15.06■□□□□ 0
ARHGEF39-204ENST00000488918 ZNF530Q6P9A1 599 aaPredicted RBP15.05■□□□□ -0
ARHGEF39-204ENST00000488918 SMARCC1Q92922 1105 aaPredicted RBP15.05■□□□□ -0
ARHGEF39-204ENST00000488918 TMOD3Q9NYL9 352 aa15.05■□□□□ -0
ARHGEF39-204ENST00000488918 PPP1R1BQ9UD71 204 aaPredicted RBP15.05■□□□□ -0
ARHGEF39-204ENST00000488918 RGPD2P0DJD1 1756 aa15.05■□□□□ -0
ARHGEF39-204ENST00000488918 KAT6BQ8WYB5 2073 aa15.04■□□□□ -0
ARHGEF39-204ENST00000488918 CYP27B1O15528 508 aa15.04■□□□□ -0
ARHGEF39-204ENST00000488918 CCNL1Q9UK58 526 aaPredicted RBP15.04■□□□□ -0
ARHGEF39-204ENST00000488918 NHSQ6T4R5 1651 aa15.03■□□□□ -0
ARHGEF39-204ENST00000488918 IL13P35225 146 aa15.03■□□□□ -0
ARHGEF39-204ENST00000488918 PLEKHG2Q9H7P9 1386 aa15.02■□□□□ -0
ARHGEF39-204ENST00000488918 SBF2Q86WG5 1849 aa15.02■□□□□ -0
ARHGEF39-204ENST00000488918 NEFMP07197 916 aa15.02■□□□□ -0
ARHGEF39-204ENST00000488918 PHKG2P15735 406 aa15.02■□□□□ -0
ARHGEF39-204ENST00000488918 SLC15A2Q16348 729 aa15.02■□□□□ -0
ARHGEF39-204ENST00000488918 TFCP2L1Q9NZI6 479 aa15.02■□□□□ -0
ARHGEF39-204ENST00000488918 HMOX1P09601 288 aa15.01□□□□□ -0.01
ARHGEF39-204ENST00000488918 CABP4P57796 275 aa15.01□□□□□ -0.01
ARHGEF39-204ENST00000488918 PROM2Q8N271 834 aa15.01□□□□□ -0.01
ARHGEF39-204ENST00000488918 DCAF5Q96JK2 942 aa15.01□□□□□ -0.01
ARHGEF39-204ENST00000488918 SPON1Q9HCB6 807 aa15.01□□□□□ -0.01
ARHGEF39-204ENST00000488918 MSH5O43196 834 aa15□□□□□ -0.01
ARHGEF39-204ENST00000488918 NKX1-1Q15270 411 aaPredicted RBP15□□□□□ -0.01
ARHGEF39-204ENST00000488918 AEBP1Q8IUX7 1158 aa15□□□□□ -0.01
ARHGEF39-204ENST00000488918 RGPD3A6NKT7 1758 aaPredicted RBP15□□□□□ -0.01
ARHGEF39-204ENST00000488918 RGPD4Q7Z3J3 1758 aa15□□□□□ -0.01
ARHGEF39-204ENST00000488918 NCAPD2Q15021 1401 aa15□□□□□ -0.01
ARHGEF39-204ENST00000488918 RREB1Q92766 1687 aa14.98□□□□□ -0.01
ARHGEF39-204ENST00000488918 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
ARHGEF39-204ENST00000488918 ERVV-2B6SEH9 535 aa14.98□□□□□ -0.01
ARHGEF39-204ENST00000488918 DDX10Q13206 875 aaKnown RBP14.98□□□□□ -0.01
ARHGEF39-204ENST00000488918 ANO8Q9HCE9 1232 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF39-204ENST00000488918 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
ARHGEF39-204ENST00000488918 PPP2R1AP30153 589 aa14.97□□□□□ -0.01
ARHGEF39-204ENST00000488918 AKAP4Q5JQC9 854 aa14.97□□□□□ -0.01
ARHGEF39-204ENST00000488918 PIGBQ92521 554 aa14.97□□□□□ -0.01
ARHGEF39-204ENST00000488918 NUP188Q5SRE5 1749 aa14.97□□□□□ -0.01
ARHGEF39-204ENST00000488918 DOT1LQ8TEK3 1739 aa14.97□□□□□ -0.01
ARHGEF39-204ENST00000488918 BTAF1O14981 1849 aa14.96□□□□□ -0.01
ARHGEF39-204ENST00000488918 U2AF1L5P0DN76 240 aaPredicted RBP14.96□□□□□ -0.01
ARHGEF39-204ENST00000488918 U2AF1Q01081 240 aaKnown RBP eCLIP14.96□□□□□ -0.01
ARHGEF39-204ENST00000488918 AK7Q96M32 723 aa14.96□□□□□ -0.01
ARHGEF39-204ENST00000488918 ZBTB7AO95365 584 aa14.95□□□□□ -0.02
ARHGEF39-204ENST00000488918 KCNQ4P56696 695 aa14.95□□□□□ -0.02
ARHGEF39-204ENST00000488918 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
ARHGEF39-204ENST00000488918 LRRC4BQ9NT99 713 aa14.95□□□□□ -0.02
ARHGEF39-204ENST00000488918 KDRP35968 1356 aa14.95□□□□□ -0.02
ARHGEF39-204ENST00000488918 RALBP1Q15311 655 aa14.94□□□□□ -0.02
ARHGEF39-204ENST00000488918 GAS2L2Q8NHY3 880 aa14.94□□□□□ -0.02
ARHGEF39-204ENST00000488918 PNNQ9H307 717 aaKnown RBP14.94□□□□□ -0.02
ARHGEF39-204ENST00000488918 PKD1L3Q7Z443 1732 aa14.94□□□□□ -0.02
ARHGEF39-204ENST00000488918 POLD1P28340 1107 aa14.93□□□□□ -0.02
ARHGEF39-204ENST00000488918 ATP6V1AP38606 617 aa14.93□□□□□ -0.02
ARHGEF39-204ENST00000488918 FLAD1Q8NFF5 587 aa14.93□□□□□ -0.02
ARHGEF39-204ENST00000488918 MTFR1LQ9H019 292 aa14.93□□□□□ -0.02
ARHGEF39-204ENST00000488918 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF39-204ENST00000488918 LOC102724428A0A0B4J2F2 783 aa14.92□□□□□ -0.02
ARHGEF39-204ENST00000488918 SIK1P57059 783 aa14.92□□□□□ -0.02
ARHGEF39-204ENST00000488918 SHANK3Q9BYB0 1731 aa14.92□□□□□ -0.02
ARHGEF39-204ENST00000488918 ZNF827Q17R98 1081 aa14.91□□□□□ -0.02
ARHGEF39-204ENST00000488918 NFATC2IPQ8NCF5 419 aa14.91□□□□□ -0.02
ARHGEF39-204ENST00000488918 SLC16A10Q8TF71 515 aa14.91□□□□□ -0.02
ARHGEF39-204ENST00000488918 RTF1Q92541 710 aaKnown RBP14.91□□□□□ -0.02
ARHGEF39-204ENST00000488918 ASAP1Q9ULH1 1129 aa14.91□□□□□ -0.02
ARHGEF39-204ENST00000488918 GNAT3A8MTJ3 354 aa14.9□□□□□ -0.02
ARHGEF39-204ENST00000488918 PRKAR2BP31323 418 aa14.9□□□□□ -0.02
ARHGEF39-204ENST00000488918 TEFQ10587 303 aa14.9□□□□□ -0.02
ARHGEF39-204ENST00000488918 MTHFSDQ2M296 383 aaKnown RBP14.9□□□□□ -0.02
ARHGEF39-204ENST00000488918 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
ARHGEF39-204ENST00000488918 PTCD1O75127 700 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms