RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 JCADQ9P266 1359 aa17.16■□□□□ 0.34
CHD1L-208ENST00000488864 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
CHD1L-208ENST00000488864 KDRP35968 1356 aa17.15■□□□□ 0.34
CHD1L-208ENST00000488864 RIPK4P57078 832 aa17.15■□□□□ 0.34
CHD1L-208ENST00000488864 EVA1CP58658 441 aa17.15■□□□□ 0.34
CHD1L-208ENST00000488864 PDE3BQ13370 1112 aa17.15■□□□□ 0.34
CHD1L-208ENST00000488864 TOM1L2Q6ZVM7 507 aa17.13■□□□□ 0.33
CHD1L-208ENST00000488864 CRBNQ96SW2 442 aa17.13■□□□□ 0.33
CHD1L-208ENST00000488864 LARP1Q6PKG0 1096 aaKnown RBP17.13■□□□□ 0.33
CHD1L-208ENST00000488864 WWC1Q8IX03 1113 aa17.13■□□□□ 0.33
CHD1L-208ENST00000488864 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
CHD1L-208ENST00000488864 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
CHD1L-208ENST00000488864 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
CHD1L-208ENST00000488864 LMO7Q8WWI1 1683 aa17.11■□□□□ 0.33
CHD1L-208ENST00000488864 WDR17Q8IZU2 1322 aa17.11■□□□□ 0.33
CHD1L-208ENST00000488864 TRIM35Q9UPQ4 493 aa17.11■□□□□ 0.33
CHD1L-208ENST00000488864 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
CHD1L-208ENST00000488864 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
CHD1L-208ENST00000488864 C8orf37Q96NL8 207 aa17.1■□□□□ 0.33
CHD1L-208ENST00000488864 THUMPD2Q9BTF0 503 aaKnown RBP17.1■□□□□ 0.33
CHD1L-208ENST00000488864 DCTN1Q14203 1278 aa17.09■□□□□ 0.33
CHD1L-208ENST00000488864 ABCC6O95255 1503 aa17.09■□□□□ 0.33
CHD1L-208ENST00000488864 GOLGA2Q08379 1002 aa17.08■□□□□ 0.33
CHD1L-208ENST00000488864 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
CHD1L-208ENST00000488864 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
CHD1L-208ENST00000488864 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
CHD1L-208ENST00000488864 RAPGEF4Q8WZA2 1011 aa17.07■□□□□ 0.32
CHD1L-208ENST00000488864 NGLY1Q96IV0 654 aa17.07■□□□□ 0.32
CHD1L-208ENST00000488864 LRP6O75581 1613 aa17.06■□□□□ 0.32
CHD1L-208ENST00000488864 CCDC27Q2M243 656 aa17.06■□□□□ 0.32
CHD1L-208ENST00000488864 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
CHD1L-208ENST00000488864 SPATA31A6Q5VVP1 1343 aa17.06■□□□□ 0.32
CHD1L-208ENST00000488864 COL14A1Q05707 1796 aaKnown RBP17.06■□□□□ 0.32
CHD1L-208ENST00000488864 NCAPD2Q15021 1401 aa17.06■□□□□ 0.32
CHD1L-208ENST00000488864 MCM10Q7L590 875 aa17.06■□□□□ 0.32
CHD1L-208ENST00000488864 DDRGK1Q96HY6 314 aa17.05■□□□□ 0.32
CHD1L-208ENST00000488864 GAS2L2Q8NHY3 880 aa17.05■□□□□ 0.32
CHD1L-208ENST00000488864 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
CHD1L-208ENST00000488864 MEGF6O75095 1541 aa17.04■□□□□ 0.32
CHD1L-208ENST00000488864 MEX3CQ5U5Q3 659 aaKnown RBP17.04■□□□□ 0.32
CHD1L-208ENST00000488864 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
CHD1L-208ENST00000488864 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
CHD1L-208ENST00000488864 FAM208AQ9UK61 1670 aaKnown RBP17.03■□□□□ 0.32
CHD1L-208ENST00000488864 DLG5Q8TDM6 1919 aa17.03■□□□□ 0.32
CHD1L-208ENST00000488864 SLFN5Q08AF3 891 aa17.03■□□□□ 0.32
CHD1L-208ENST00000488864 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
CHD1L-208ENST00000488864 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
CHD1L-208ENST00000488864 CRB1P82279 1406 aa17.02■□□□□ 0.32
CHD1L-208ENST00000488864 NFKBIBQ15653 356 aa17.02■□□□□ 0.32
CHD1L-208ENST00000488864 PLEKHO1Q53GL0 409 aaPredicted RBP17.02■□□□□ 0.32
CHD1L-208ENST00000488864 WDR63Q8IWG1 891 aa17.02■□□□□ 0.32
CHD1L-208ENST00000488864 PLCH1Q4KWH8 1693 aa17.02■□□□□ 0.31
CHD1L-208ENST00000488864 GSE1Q14687 1217 aa17.01■□□□□ 0.31
CHD1L-208ENST00000488864 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
CHD1L-208ENST00000488864 RTF1Q92541 710 aaKnown RBP17.01■□□□□ 0.31
CHD1L-208ENST00000488864 KDM2BQ8NHM5 1336 aa17.01■□□□□ 0.31
CHD1L-208ENST00000488864 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
CHD1L-208ENST00000488864 TSR2Q969E8 191 aaKnown RBP17.01■□□□□ 0.31
CHD1L-208ENST00000488864 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
CHD1L-208ENST00000488864 E9PSI1 815 aa17■□□□□ 0.31
CHD1L-208ENST00000488864 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
CHD1L-208ENST00000488864 AMOTQ4VCS5 1084 aa17■□□□□ 0.31
CHD1L-208ENST00000488864 SLIT2O94813 1529 aa17■□□□□ 0.31
CHD1L-208ENST00000488864 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
CHD1L-208ENST00000488864 IL2RBP14784 551 aa16.99■□□□□ 0.31
CHD1L-208ENST00000488864 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
CHD1L-208ENST00000488864 UNC5CLQ8IV45 518 aa16.99■□□□□ 0.31
CHD1L-208ENST00000488864 MAP3K5Q99683 1374 aa16.99■□□□□ 0.31
CHD1L-208ENST00000488864 C1orf141Q5JVX7 400 aa16.98■□□□□ 0.31
CHD1L-208ENST00000488864 IL17REQ8NFR9 667 aa16.98■□□□□ 0.31
CHD1L-208ENST00000488864 LGR6Q9HBX8 967 aa16.98■□□□□ 0.31
CHD1L-208ENST00000488864 USP21Q9UK80 565 aa16.98■□□□□ 0.31
CHD1L-208ENST00000488864 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
CHD1L-208ENST00000488864 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
CHD1L-208ENST00000488864 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
CHD1L-208ENST00000488864 BCL9LQ86UU0 1499 aa16.97■□□□□ 0.31
CHD1L-208ENST00000488864 AKAP4Q5JQC9 854 aa16.97■□□□□ 0.31
CHD1L-208ENST00000488864 TRMT2AQ8IZ69 625 aaKnown RBP16.97■□□□□ 0.31
CHD1L-208ENST00000488864 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
CHD1L-208ENST00000488864 CYP27B1O15528 508 aa16.96■□□□□ 0.31
CHD1L-208ENST00000488864 DDX54Q8TDD1 881 aaKnown RBP16.96■□□□□ 0.31
CHD1L-208ENST00000488864 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
CHD1L-208ENST00000488864 ZCRB1Q8TBF4 217 aaKnown RBP16.96■□□□□ 0.3
CHD1L-208ENST00000488864 NRAPQ86VF7 1730 aa16.96■□□□□ 0.3
CHD1L-208ENST00000488864 OVOS2A0A0G2JMS6 1433 aa16.95■□□□□ 0.3
CHD1L-208ENST00000488864 AFF2P51816 1311 aa16.95■□□□□ 0.3
CHD1L-208ENST00000488864 C8orf34Q49A92 452 aa16.95■□□□□ 0.3
CHD1L-208ENST00000488864 FBXO41Q8TF61 875 aa16.95■□□□□ 0.3
CHD1L-208ENST00000488864 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
CHD1L-208ENST00000488864 SPATA31A5Q5VU36 1347 aa16.94■□□□□ 0.3
CHD1L-208ENST00000488864 SPATA31A7Q8IWB4 1347 aa16.94■□□□□ 0.3
CHD1L-208ENST00000488864 PHKG2P15735 406 aa16.94■□□□□ 0.3
CHD1L-208ENST00000488864 CENPQQ7L2Z9 268 aaPredicted RBP16.94■□□□□ 0.3
CHD1L-208ENST00000488864 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.94■□□□□ 0.31e-10■■■□□ 16.7
CHD1L-208ENST00000488864 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
CHD1L-208ENST00000488864 IL16Q14005 1332 aa16.93■□□□□ 0.3
CHD1L-208ENST00000488864 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
CHD1L-208ENST00000488864 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
CHD1L-208ENST00000488864 MBIPQ9NS73 344 aa16.93■□□□□ 0.3
CHD1L-208ENST00000488864 NWD2Q9ULI1 1742 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms