RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 RAPGEF4Q8WZA2 1011 aa11.96□□□□□ -0.49
SMKR1-202ENST00000488846 PRKRIP1Q9H875 184 aaPredicted RBP11.96□□□□□ -0.49
SMKR1-202ENST00000488846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMKR1-202ENST00000488846 PKD1L3Q7Z443 1732 aa11.96□□□□□ -0.49
SMKR1-202ENST00000488846 TATP17735 454 aaPredicted RBP11.95□□□□□ -0.5
SMKR1-202ENST00000488846 CNGB1Q14028 1251 aaPredicted RBP11.95□□□□□ -0.5
SMKR1-202ENST00000488846 CCDC125Q86Z20 511 aa11.95□□□□□ -0.5
SMKR1-202ENST00000488846 ZCRB1Q8TBF4 217 aaKnown RBP11.95□□□□□ -0.5
SMKR1-202ENST00000488846 MYBBP1AQ9BQG0 1328 aaKnown RBP11.94□□□□□ -0.5
SMKR1-202ENST00000488846 FAM182BQ5T319 152 aa11.94□□□□□ -0.5
SMKR1-202ENST00000488846 CFAP53Q96M91 514 aa11.94□□□□□ -0.5
SMKR1-202ENST00000488846 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
SMKR1-202ENST00000488846 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
SMKR1-202ENST00000488846 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
SMKR1-202ENST00000488846 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
SMKR1-202ENST00000488846 PPP4R3CPQ6ZMV5 832 aa11.92□□□□□ -0.5
SMKR1-202ENST00000488846 TNS1Q9HBL0 1735 aaKnown RBP11.91□□□□□ -0.5
SMKR1-202ENST00000488846 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
SMKR1-202ENST00000488846 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
SMKR1-202ENST00000488846 CYP27B1O15528 508 aa11.91□□□□□ -0.5
SMKR1-202ENST00000488846 SPG7Q9UQ90 795 aa11.91□□□□□ -0.5
SMKR1-202ENST00000488846 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
SMKR1-202ENST00000488846 NUDCQ9Y266 331 aa11.9□□□□□ -0.5
SMKR1-202ENST00000488846 POTEDQ86YR6 584 aa11.89□□□□□ -0.51
SMKR1-202ENST00000488846 DDX54Q8TDD1 881 aaKnown RBP11.89□□□□□ -0.51
SMKR1-202ENST00000488846 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
SMKR1-202ENST00000488846 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
SMKR1-202ENST00000488846 NHSQ6T4R5 1651 aa11.89□□□□□ -0.51
SMKR1-202ENST00000488846 FCHSD2O94868 740 aa11.88□□□□□ -0.51
SMKR1-202ENST00000488846 TRIM37O94972 964 aa11.88□□□□□ -0.51
SMKR1-202ENST00000488846 HMOX1P09601 288 aa11.88□□□□□ -0.51
SMKR1-202ENST00000488846 PHKG2P15735 406 aa11.88□□□□□ -0.51
SMKR1-202ENST00000488846 PLEKHO1Q53GL0 409 aaPredicted RBP11.88□□□□□ -0.51
SMKR1-202ENST00000488846 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
SMKR1-202ENST00000488846 IFNL2Q8IZJ0 200 aa11.87□□□□□ -0.51
SMKR1-202ENST00000488846 PLSCR1O15162 318 aa11.86□□□□□ -0.51
SMKR1-202ENST00000488846 KCNQ2O43526 872 aa11.86□□□□□ -0.51
SMKR1-202ENST00000488846 PTF1AQ7RTS3 328 aa11.86□□□□□ -0.51
SMKR1-202ENST00000488846 RGPD3A6NKT7 1758 aaPredicted RBP11.86□□□□□ -0.51
SMKR1-202ENST00000488846 RGPD4Q7Z3J3 1758 aa11.86□□□□□ -0.51
SMKR1-202ENST00000488846 TOGARAM1Q9Y4F4 1720 aa11.86□□□□□ -0.51
SMKR1-202ENST00000488846 ADAMTS7Q9UKP4 1686 aa11.85□□□□□ -0.51
SMKR1-202ENST00000488846 ANP32CO43423 234 aa11.85□□□□□ -0.51
SMKR1-202ENST00000488846 U2AF1L5P0DN76 240 aaPredicted RBP11.85□□□□□ -0.51
SMKR1-202ENST00000488846 U2AF1Q01081 240 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMKR1-202ENST00000488846 CAMKK2Q96RR4 588 aa11.85□□□□□ -0.51
SMKR1-202ENST00000488846 DOT1LQ8TEK3 1739 aa11.85□□□□□ -0.51
SMKR1-202ENST00000488846 HSP90AB1P08238 724 aaKnown RBP11.84□□□□□ -0.51
SMKR1-202ENST00000488846 BAG6P46379 1132 aa11.84□□□□□ -0.51
SMKR1-202ENST00000488846 SF3B2Q13435 895 aaKnown RBP11.84□□□□□ -0.51
SMKR1-202ENST00000488846 MTHFSDQ2M296 383 aaKnown RBP11.84□□□□□ -0.51
SMKR1-202ENST00000488846 AKAP4Q5JQC9 854 aa11.84□□□□□ -0.51
SMKR1-202ENST00000488846 ZNF530Q6P9A1 599 aaPredicted RBP11.84□□□□□ -0.51
SMKR1-202ENST00000488846 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
SMKR1-202ENST00000488846 PLEKHF1Q96S99 279 aa11.84□□□□□ -0.51
SMKR1-202ENST00000488846 KDM6AO15550 1401 aaPredicted RBP11.84□□□□□ -0.51
SMKR1-202ENST00000488846 APBA3O96018 575 aa11.83□□□□□ -0.52
SMKR1-202ENST00000488846 PRKAR2BP31323 418 aa11.83□□□□□ -0.52
SMKR1-202ENST00000488846 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
SMKR1-202ENST00000488846 DEFB132Q7Z7B7 95 aa11.83□□□□□ -0.52
SMKR1-202ENST00000488846 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
SMKR1-202ENST00000488846 PHACTR3Q96KR7 559 aa11.83□□□□□ -0.52
SMKR1-202ENST00000488846 BTAF1O14981 1849 aa11.82□□□□□ -0.52
SMKR1-202ENST00000488846 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
SMKR1-202ENST00000488846 C1orf141Q5JVX7 400 aa11.82□□□□□ -0.52
SMKR1-202ENST00000488846 GAS2L2Q8NHY3 880 aa11.82□□□□□ -0.52
SMKR1-202ENST00000488846 ITGB4P16144 1822 aa11.81□□□□□ -0.52
SMKR1-202ENST00000488846 RREB1Q92766 1687 aa11.81□□□□□ -0.52
SMKR1-202ENST00000488846 EN1Q05925 392 aaPredicted RBP11.81□□□□□ -0.52
SMKR1-202ENST00000488846 CCDC184Q52MB2 194 aa11.81□□□□□ -0.52
SMKR1-202ENST00000488846 PNNQ9H307 717 aaKnown RBP11.81□□□□□ -0.52
SMKR1-202ENST00000488846 SCN11AQ9UI33 1791 aa11.81□□□□□ -0.52
SMKR1-202ENST00000488846 MRC1P22897 1456 aa11.81□□□□□ -0.52
SMKR1-202ENST00000488846 MAPK8IP2Q13387 824 aaPredicted RBP11.8□□□□□ -0.52
SMKR1-202ENST00000488846 PROM2Q8N271 834 aa11.8□□□□□ -0.52
SMKR1-202ENST00000488846 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
SMKR1-202ENST00000488846 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
SMKR1-202ENST00000488846 RNMTO43148 476 aaKnown RBP11.79□□□□□ -0.52
SMKR1-202ENST00000488846 EZH2Q15910 746 aaKnown RBP11.79□□□□□ -0.52
SMKR1-202ENST00000488846 PIGBQ92521 554 aa11.79□□□□□ -0.52
SMKR1-202ENST00000488846 ADAMTS8Q9UP79 889 aa11.79□□□□□ -0.52
SMKR1-202ENST00000488846 LY75O60449 1722 aa11.78□□□□□ -0.52
SMKR1-202ENST00000488846 GNAT3A8MTJ3 354 aa11.78□□□□□ -0.52
SMKR1-202ENST00000488846 HTATSF1O43719 755 aaKnown RBP11.78□□□□□ -0.52
SMKR1-202ENST00000488846 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
SMKR1-202ENST00000488846 PNISRQ8TF01 805 aaKnown RBP11.78□□□□□ -0.52
SMKR1-202ENST00000488846 LGR6Q9HBX8 967 aa11.78□□□□□ -0.52
SMKR1-202ENST00000488846 KAT6BQ8WYB5 2073 aa11.78□□□□□ -0.52
SMKR1-202ENST00000488846 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.52
SMKR1-202ENST00000488846 VIRMAQ69YN4 1812 aaKnown RBP11.77□□□□□ -0.52
SMKR1-202ENST00000488846 WDR43Q15061 677 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMKR1-202ENST00000488846 TXNRD1Q16881 649 aa11.77□□□□□ -0.53
SMKR1-202ENST00000488846 IL17REQ8NFR9 667 aa11.77□□□□□ -0.53
SMKR1-202ENST00000488846 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.53
SMKR1-202ENST00000488846 SLC52A2Q9HAB3 445 aa11.77□□□□□ -0.53
SMKR1-202ENST00000488846 TMOD3Q9NYL9 352 aa11.77□□□□□ -0.53
SMKR1-202ENST00000488846 NFE2L2Q16236 605 aa11.76□□□□□ -0.53
SMKR1-202ENST00000488846 SLC27A3Q5K4L6 730 aa11.76□□□□□ -0.53
SMKR1-202ENST00000488846 SMARCC1Q92922 1105 aaPredicted RBP11.76□□□□□ -0.53
SMKR1-202ENST00000488846 RUNDC1Q96C34 613 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms