RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 WNK3Q9BYP7 1800 aa17.1■□□□□ 0.33
SFXN5-219ENST00000488839 APBA3O96018 575 aa17.09■□□□□ 0.33
SFXN5-219ENST00000488839 IL2RBP14784 551 aa17.09■□□□□ 0.33
SFXN5-219ENST00000488839 HOXC9P31274 260 aa17.09■□□□□ 0.33
SFXN5-219ENST00000488839 EN1Q05925 392 aaPredicted RBP17.09■□□□□ 0.33
SFXN5-219ENST00000488839 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
SFXN5-219ENST00000488839 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
SFXN5-219ENST00000488839 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
SFXN5-219ENST00000488839 MYOM1P52179 1685 aa17.09■□□□□ 0.33
SFXN5-219ENST00000488839 TNS1Q9HBL0 1735 aaKnown RBP17.09■□□□□ 0.33
SFXN5-219ENST00000488839 FAM208AQ9UK61 1670 aaKnown RBP17.08■□□□□ 0.32
SFXN5-219ENST00000488839 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
SFXN5-219ENST00000488839 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
SFXN5-219ENST00000488839 MARCH10Q8NA82 808 aaPredicted RBP17.07■□□□□ 0.32
SFXN5-219ENST00000488839 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
SFXN5-219ENST00000488839 PLSCR1O15162 318 aa17.06■□□□□ 0.32
SFXN5-219ENST00000488839 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
SFXN5-219ENST00000488839 TNS2Q63HR2 1409 aa17.05■□□□□ 0.32
SFXN5-219ENST00000488839 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
SFXN5-219ENST00000488839 EZH2Q15910 746 aaKnown RBP17.04■□□□□ 0.32
SFXN5-219ENST00000488839 INSRP06213 1382 aa17.03■□□□□ 0.32
SFXN5-219ENST00000488839 FLT4P35916 1363 aa17.03■□□□□ 0.32
SFXN5-219ENST00000488839 RRS1Q15050 365 aaKnown RBP17.03■□□□□ 0.32
SFXN5-219ENST00000488839 SMG6Q86US8 1419 aaKnown RBP17.03■□□□□ 0.32
SFXN5-219ENST00000488839 FBLN1P23142 703 aa17.01■□□□□ 0.31
SFXN5-219ENST00000488839 LTV1Q96GA3 475 aaPredicted RBP17.01■□□□□ 0.31
SFXN5-219ENST00000488839 POLR3GLQ9BT43 218 aa17.01■□□□□ 0.31
SFXN5-219ENST00000488839 SBF2Q86WG5 1849 aa17■□□□□ 0.31
SFXN5-219ENST00000488839 NBPF14Q5TI25 921 aa17■□□□□ 0.31
SFXN5-219ENST00000488839 PANK3Q9H999 370 aa17■□□□□ 0.31
SFXN5-219ENST00000488839 NSD2O96028 1365 aa17■□□□□ 0.31
SFXN5-219ENST00000488839 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
SFXN5-219ENST00000488839 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
SFXN5-219ENST00000488839 WASHC2AQ641Q2 1341 aa16.98■□□□□ 0.31
SFXN5-219ENST00000488839 HSP90AB2PQ58FF8 381 aa16.98■□□□□ 0.31
SFXN5-219ENST00000488839 NBPF6Q5VWK0 638 aa16.97■□□□□ 0.31
SFXN5-219ENST00000488839 NBPF4Q96M43 638 aa16.97■□□□□ 0.31
SFXN5-219ENST00000488839 RREB1Q92766 1687 aa16.97■□□□□ 0.31
SFXN5-219ENST00000488839 CD44P16070 742 aaKnown RBP16.96■□□□□ 0.31
SFXN5-219ENST00000488839 ZCRB1Q8TBF4 217 aaKnown RBP16.96■□□□□ 0.31
SFXN5-219ENST00000488839 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
SFXN5-219ENST00000488839 POLKQ9UBT6 870 aa16.94■□□□□ 0.3
SFXN5-219ENST00000488839 KNSTRNQ9Y448 316 aa16.94■□□□□ 0.3
SFXN5-219ENST00000488839 FARP1Q9Y4F1 1045 aaPredicted RBP16.94■□□□□ 0.3
SFXN5-219ENST00000488839 EMILIN1Q9Y6C2 1016 aa16.94■□□□□ 0.3
SFXN5-219ENST00000488839 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
SFXN5-219ENST00000488839 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
SFXN5-219ENST00000488839 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
SFXN5-219ENST00000488839 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
SFXN5-219ENST00000488839 KIF7Q2M1P5 1343 aa16.93■□□□□ 0.3
SFXN5-219ENST00000488839 PSDA5PKW4 1024 aaPredicted RBP16.92■□□□□ 0.3
SFXN5-219ENST00000488839 CLCN6P51797 869 aa16.92■□□□□ 0.3
SFXN5-219ENST00000488839 DDX54Q8TDD1 881 aaKnown RBP16.92■□□□□ 0.3
SFXN5-219ENST00000488839 NUP188Q5SRE5 1749 aa16.92■□□□□ 0.3
SFXN5-219ENST00000488839 PLEKHG2Q9H7P9 1386 aa16.91■□□□□ 0.3
SFXN5-219ENST00000488839 NCAPD2Q15021 1401 aa16.91■□□□□ 0.3
SFXN5-219ENST00000488839 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
SFXN5-219ENST00000488839 KCNQ2O43526 872 aa16.91■□□□□ 0.3
SFXN5-219ENST00000488839 PTF1AQ7RTS3 328 aa16.91■□□□□ 0.3
SFXN5-219ENST00000488839 MAP2P11137 1827 aaKnown RBP16.91■□□□□ 0.3
SFXN5-219ENST00000488839 LRP5O75197 1615 aa16.9■□□□□ 0.3
SFXN5-219ENST00000488839 TXNRD1Q16881 649 aa16.9■□□□□ 0.3
SFXN5-219ENST00000488839 PROM2Q8N271 834 aa16.9■□□□□ 0.3
SFXN5-219ENST00000488839 MEGF6O75095 1541 aa16.9■□□□□ 0.3
SFXN5-219ENST00000488839 RGPD2P0DJD1 1756 aa16.89■□□□□ 0.3
SFXN5-219ENST00000488839 HMGB2P26583 209 aaKnown RBP16.89■□□□□ 0.29
SFXN5-219ENST00000488839 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
SFXN5-219ENST00000488839 ACSBG1Q96GR2 724 aa16.89■□□□□ 0.29
SFXN5-219ENST00000488839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.29
SFXN5-219ENST00000488839 PCDH11XQ9BZA7 1347 aa16.88■□□□□ 0.29
SFXN5-219ENST00000488839 PCDH11YQ9BZA8 1340 aa16.88■□□□□ 0.29
SFXN5-219ENST00000488839 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
SFXN5-219ENST00000488839 POTEIP0CG38 1075 aa16.87■□□□□ 0.29
SFXN5-219ENST00000488839 AMER1Q5JTC6 1135 aaPredicted RBP16.87■□□□□ 0.29
SFXN5-219ENST00000488839 USHBP1Q8N6Y0 703 aa16.87■□□□□ 0.29
SFXN5-219ENST00000488839 SLC27A3Q5K4L6 730 aa16.86■□□□□ 0.29
SFXN5-219ENST00000488839 EYA1Q99502 592 aa16.86■□□□□ 0.29
SFXN5-219ENST00000488839 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
SFXN5-219ENST00000488839 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
SFXN5-219ENST00000488839 PRIM1P49642 420 aaKnown RBP16.84■□□□□ 0.29
SFXN5-219ENST00000488839 EIF4A2Q14240 407 aaKnown RBP16.84■□□□□ 0.29
SFXN5-219ENST00000488839 STK32BQ9NY57 414 aa16.84■□□□□ 0.29
SFXN5-219ENST00000488839 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
SFXN5-219ENST00000488839 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
SFXN5-219ENST00000488839 BTAF1O14981 1849 aa16.83■□□□□ 0.28
SFXN5-219ENST00000488839 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
SFXN5-219ENST00000488839 SLC15A2Q16348 729 aa16.83■□□□□ 0.28
SFXN5-219ENST00000488839 IGSF1Q8N6C5 1336 aa16.82■□□□□ 0.28
SFXN5-219ENST00000488839 SYTL4Q96C24 671 aaPredicted RBP16.81■□□□□ 0.28
SFXN5-219ENST00000488839 SPON1Q9HCB6 807 aa16.81■□□□□ 0.28
SFXN5-219ENST00000488839 KAT6BQ8WYB5 2073 aa16.81■□□□□ 0.28
SFXN5-219ENST00000488839 PKD1L3Q7Z443 1732 aa16.8■□□□□ 0.28
SFXN5-219ENST00000488839 CYP27B1O15528 508 aa16.8■□□□□ 0.28
SFXN5-219ENST00000488839 ANO8Q9HCE9 1232 aaPredicted RBP16.8■□□□□ 0.28
SFXN5-219ENST00000488839 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
SFXN5-219ENST00000488839 DOT1LQ8TEK3 1739 aa16.79■□□□□ 0.28
SFXN5-219ENST00000488839 AMOTQ4VCS5 1084 aa16.78■□□□□ 0.28
SFXN5-219ENST00000488839 SRCAPQ6ZRS2 3230 aa16.78■□□□□ 0.28
SFXN5-219ENST00000488839 SMARCC1Q92922 1105 aaPredicted RBP16.77■□□□□ 0.28
SFXN5-219ENST00000488839 LRRC4BQ9NT99 713 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms