RNA–Protein interactions for RNA: ENST00000488592.1

SCMH1-215, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2

Gene SCMH1, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-215ENST00000488592 PKD1L3Q7Z443 1732 aa17.42■□□□□ 0.38
SCMH1-215ENST00000488592 ZCRB1Q8TBF4 217 aaKnown RBP17.42■□□□□ 0.38
SCMH1-215ENST00000488592 ACSBG1Q96GR2 724 aa17.42■□□□□ 0.38
SCMH1-215ENST00000488592 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
SCMH1-215ENST00000488592 RRS1Q15050 365 aaKnown RBP17.41■□□□□ 0.38
SCMH1-215ENST00000488592 MTFR1LQ9H019 292 aa17.41■□□□□ 0.38
SCMH1-215ENST00000488592 NSD2O96028 1365 aa17.4■□□□□ 0.38
SCMH1-215ENST00000488592 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
SCMH1-215ENST00000488592 CARD14Q9BXL6 1004 aa17.4■□□□□ 0.38
SCMH1-215ENST00000488592 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
SCMH1-215ENST00000488592 DDX54Q8TDD1 881 aaKnown RBP17.39■□□□□ 0.37
SCMH1-215ENST00000488592 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
SCMH1-215ENST00000488592 PTGER2P43116 358 aa17.38■□□□□ 0.37
SCMH1-215ENST00000488592 PCDH11XQ9BZA7 1347 aa17.38■□□□□ 0.37
SCMH1-215ENST00000488592 PCDH11YQ9BZA8 1340 aa17.38■□□□□ 0.37
SCMH1-215ENST00000488592 MAP3K5Q99683 1374 aa17.38■□□□□ 0.37
SCMH1-215ENST00000488592 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
SCMH1-215ENST00000488592 FBLN1P23142 703 aa17.37■□□□□ 0.37
SCMH1-215ENST00000488592 SLC16A10Q8TF71 515 aa17.37■□□□□ 0.37
SCMH1-215ENST00000488592 TUBGCP6Q96RT7 1819 aa17.37■□□□□ 0.37
SCMH1-215ENST00000488592 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
SCMH1-215ENST00000488592 EIF4G2P78344 907 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCMH1-215ENST00000488592 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
SCMH1-215ENST00000488592 PCGF6Q9BYE7 350 aa17.36■□□□□ 0.37
SCMH1-215ENST00000488592 WASHC2AQ641Q2 1341 aa17.36■□□□□ 0.37
SCMH1-215ENST00000488592 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
SCMH1-215ENST00000488592 SGIP1Q9BQI5 828 aa17.35■□□□□ 0.37
SCMH1-215ENST00000488592 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
SCMH1-215ENST00000488592 ZBTB7AO95365 584 aa17.34■□□□□ 0.37
SCMH1-215ENST00000488592 ITGB4P16144 1822 aa17.34■□□□□ 0.37
SCMH1-215ENST00000488592 PRIM1P49642 420 aaKnown RBP17.34■□□□□ 0.37
SCMH1-215ENST00000488592 PDGFDQ9GZP0 370 aaPredicted RBP17.34■□□□□ 0.37
SCMH1-215ENST00000488592 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.361e-15■■□□□ 12.3
SCMH1-215ENST00000488592 TAF1LQ8IZX4 1826 aa17.33■□□□□ 0.36
SCMH1-215ENST00000488592 C5P01031 1676 aa17.32■□□□□ 0.36
SCMH1-215ENST00000488592 ZNF827Q17R98 1081 aa17.32■□□□□ 0.36
SCMH1-215ENST00000488592 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
SCMH1-215ENST00000488592 TOGARAM1Q9Y4F4 1720 aa17.32■□□□□ 0.36
SCMH1-215ENST00000488592 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
SCMH1-215ENST00000488592 CHD4Q14839 1912 aa17.3■□□□□ 0.36
SCMH1-215ENST00000488592 USHBP1Q8N6Y0 703 aa17.3■□□□□ 0.36
SCMH1-215ENST00000488592 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
SCMH1-215ENST00000488592 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
SCMH1-215ENST00000488592 ARXQ96QS3 562 aa17.28■□□□□ 0.36
SCMH1-215ENST00000488592 POLKQ9UBT6 870 aa17.28■□□□□ 0.36
SCMH1-215ENST00000488592 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
SCMH1-215ENST00000488592 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
SCMH1-215ENST00000488592 PNPLA7Q6ZV29 1317 aa17.27■□□□□ 0.36
SCMH1-215ENST00000488592 CYP27B1O15528 508 aa17.27■□□□□ 0.36
SCMH1-215ENST00000488592 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.36
SCMH1-215ENST00000488592 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.36
SCMH1-215ENST00000488592 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.36
SCMH1-215ENST00000488592 SYT17Q9BSW7 474 aa17.27■□□□□ 0.36
SCMH1-215ENST00000488592 FHDC1Q9C0D6 1143 aaPredicted RBP17.26■□□□□ 0.35
SCMH1-215ENST00000488592 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
SCMH1-215ENST00000488592 PALLDQ8WX93 1383 aa17.26■□□□□ 0.35
SCMH1-215ENST00000488592 YY1P25490 414 aa17.25■□□□□ 0.35
SCMH1-215ENST00000488592 POLD1P28340 1107 aa17.25■□□□□ 0.35
SCMH1-215ENST00000488592 EYA1Q99502 592 aa17.25■□□□□ 0.35
SCMH1-215ENST00000488592 ZNF831Q5JPB2 1677 aa17.25■□□□□ 0.35
SCMH1-215ENST00000488592 UTRNP46939 3433 aa17.25■□□□□ 0.35
SCMH1-215ENST00000488592 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
SCMH1-215ENST00000488592 FLAD1Q8NFF5 587 aa17.24■□□□□ 0.35
SCMH1-215ENST00000488592 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
SCMH1-215ENST00000488592 IGSF1Q8N6C5 1336 aa17.22■□□□□ 0.35
SCMH1-215ENST00000488592 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
SCMH1-215ENST00000488592 PANK3Q9H999 370 aa17.22■□□□□ 0.35
SCMH1-215ENST00000488592 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.35
SCMH1-215ENST00000488592 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
SCMH1-215ENST00000488592 MPRIPQ6WCQ1 1025 aa17.2■□□□□ 0.34
SCMH1-215ENST00000488592 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
SCMH1-215ENST00000488592 HSP90AB1P08238 724 aaKnown RBP17.19■□□□□ 0.34
SCMH1-215ENST00000488592 PHKG2P15735 406 aa17.18■□□□□ 0.34
SCMH1-215ENST00000488592 KCNQ4P56696 695 aa17.17■□□□□ 0.34
SCMH1-215ENST00000488592 PIGBQ92521 554 aa17.17■□□□□ 0.34
SCMH1-215ENST00000488592 TMOD3Q9NYL9 352 aa17.17■□□□□ 0.34
SCMH1-215ENST00000488592 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
SCMH1-215ENST00000488592 KDRP35968 1356 aa17.16■□□□□ 0.34
SCMH1-215ENST00000488592 AMOTQ4VCS5 1084 aa17.16■□□□□ 0.34
SCMH1-215ENST00000488592 COL23A1Q86Y22 540 aaPredicted RBP17.16■□□□□ 0.34
SCMH1-215ENST00000488592 CICQ96RK0 1608 aaPredicted RBP17.15■□□□□ 0.34
SCMH1-215ENST00000488592 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
SCMH1-215ENST00000488592 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
SCMH1-215ENST00000488592 GOLGB1Q14789 3259 aaKnown RBP17.14■□□□□ 0.33
SCMH1-215ENST00000488592 LOC102724428A0A0B4J2F2 783 aa17.14■□□□□ 0.33
SCMH1-215ENST00000488592 SSFA2P28290 1259 aa17.14■□□□□ 0.33
SCMH1-215ENST00000488592 TNNT2P45379 298 aaPredicted RBP17.14■□□□□ 0.33
SCMH1-215ENST00000488592 SIK1P57059 783 aa17.14■□□□□ 0.33
SCMH1-215ENST00000488592 DCAF5Q96JK2 942 aa17.14■□□□□ 0.33
SCMH1-215ENST00000488592 AK7Q96M32 723 aa17.14■□□□□ 0.33
SCMH1-215ENST00000488592 COL5A3P25940 1745 aaPredicted RBP17.13■□□□□ 0.33
SCMH1-215ENST00000488592 PLEKHO1Q53GL0 409 aaPredicted RBP17.13■□□□□ 0.33
SCMH1-215ENST00000488592 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
SCMH1-215ENST00000488592 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
SCMH1-215ENST00000488592 NPC1L1Q9UHC9 1359 aa17.12■□□□□ 0.33
SCMH1-215ENST00000488592 SCN11AQ9UI33 1791 aa17.12■□□□□ 0.33
SCMH1-215ENST00000488592 CD2APQ9Y5K6 639 aa17.11■□□□□ 0.33
SCMH1-215ENST00000488592 MSH5O43196 834 aa17.1■□□□□ 0.33
SCMH1-215ENST00000488592 KDM6AO15550 1401 aaPredicted RBP17.1■□□□□ 0.33
SCMH1-215ENST00000488592 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms