RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 MORC1Q86VD1 984 aa19.46■□□□□ 0.71
COL9A2-208ENST00000488463 NPC1L1Q9UHC9 1359 aa19.45■□□□□ 0.7
COL9A2-208ENST00000488463 KCNQ2O43526 872 aa19.45■□□□□ 0.7
COL9A2-208ENST00000488463 EIF4A2Q14240 407 aaKnown RBP19.45■□□□□ 0.7
COL9A2-208ENST00000488463 EYA1Q99502 592 aa19.45■□□□□ 0.7
COL9A2-208ENST00000488463 PKD1L3Q7Z443 1732 aa19.45■□□□□ 0.7
COL9A2-208ENST00000488463 ZCRB1Q8TBF4 217 aaKnown RBP19.44■□□□□ 0.7
COL9A2-208ENST00000488463 PLSCR1O15162 318 aa19.43■□□□□ 0.7
COL9A2-208ENST00000488463 KAT6BQ8WYB5 2073 aa19.43■□□□□ 0.7
COL9A2-208ENST00000488463 BTAF1O14981 1849 aa19.42■□□□□ 0.7
COL9A2-208ENST00000488463 PROM2Q8N271 834 aa19.42■□□□□ 0.7
COL9A2-208ENST00000488463 DDX54Q8TDD1 881 aaKnown RBP19.41■□□□□ 0.7
COL9A2-208ENST00000488463 RAPGEF4Q8WZA2 1011 aa19.41■□□□□ 0.7
COL9A2-208ENST00000488463 ACSBG1Q96GR2 724 aa19.41■□□□□ 0.7
COL9A2-208ENST00000488463 DOT1LQ8TEK3 1739 aa19.41■□□□□ 0.7
COL9A2-208ENST00000488463 IGSF1Q8N6C5 1336 aa19.4■□□□□ 0.7
COL9A2-208ENST00000488463 TATP17735 454 aaPredicted RBP19.39■□□□□ 0.69
COL9A2-208ENST00000488463 PSDA5PKW4 1024 aaPredicted RBP19.38■□□□□ 0.69
COL9A2-208ENST00000488463 CC2D1BQ5T0F9 858 aaKnown RBP19.38■□□□□ 0.69
COL9A2-208ENST00000488463 CYP27B1O15528 508 aa19.37■□□□□ 0.69
COL9A2-208ENST00000488463 TOGARAM1Q9Y4F4 1720 aa19.37■□□□□ 0.69
COL9A2-208ENST00000488463 PLEKHG2Q9H7P9 1386 aa19.35■□□□□ 0.69
COL9A2-208ENST00000488463 IL13P35225 146 aa19.35■□□□□ 0.69
COL9A2-208ENST00000488463 MTHFSP49914 203 aa19.35■□□□□ 0.69
COL9A2-208ENST00000488463 PCDH11XQ9BZA7 1347 aa19.34■□□□□ 0.69
COL9A2-208ENST00000488463 PCDH11YQ9BZA8 1340 aa19.34■□□□□ 0.69
COL9A2-208ENST00000488463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■■□□□ 14.3
COL9A2-208ENST00000488463 COL3A1P02461 1466 aaPredicted RBP19.34■□□□□ 0.69
COL9A2-208ENST00000488463 KDRP35968 1356 aa19.33■□□□□ 0.69
COL9A2-208ENST00000488463 PRIM1P49642 420 aaKnown RBP19.33■□□□□ 0.68
COL9A2-208ENST00000488463 R3HDM1Q15032 1099 aaKnown RBP19.33■□□□□ 0.68
COL9A2-208ENST00000488463 TXNRD1Q16881 649 aa19.33■□□□□ 0.68
COL9A2-208ENST00000488463 PAPPAQ13219 1627 aa19.33■□□□□ 0.68
COL9A2-208ENST00000488463 NKX1-1Q15270 411 aaPredicted RBP19.32■□□□□ 0.68
COL9A2-208ENST00000488463 ANO8Q9HCE9 1232 aaPredicted RBP19.32■□□□□ 0.68
COL9A2-208ENST00000488463 ITGB4P16144 1822 aa19.32■□□□□ 0.68
COL9A2-208ENST00000488463 LY75O60449 1722 aa19.31■□□□□ 0.68
COL9A2-208ENST00000488463 AEBP1Q8IUX7 1158 aa19.31■□□□□ 0.68
COL9A2-208ENST00000488463 LRP5O75197 1615 aa19.29■□□□□ 0.68
COL9A2-208ENST00000488463 SPG7Q9UQ90 795 aa19.29■□□□□ 0.68
COL9A2-208ENST00000488463 LRRC4BQ9NT99 713 aa19.28■□□□□ 0.68
COL9A2-208ENST00000488463 PHKG2P15735 406 aa19.27■□□□□ 0.68
COL9A2-208ENST00000488463 CASZ1Q86V15 1759 aa19.27■□□□□ 0.67
COL9A2-208ENST00000488463 CNGB1Q14028 1251 aaPredicted RBP19.26■□□□□ 0.67
COL9A2-208ENST00000488463 NBPF14Q5TI25 921 aa19.26■□□□□ 0.67
COL9A2-208ENST00000488463 SYTL4Q96C24 671 aaPredicted RBP19.26■□□□□ 0.67
COL9A2-208ENST00000488463 SULT6B1Q6IMI4 303 aa19.25■□□□□ 0.67
COL9A2-208ENST00000488463 IFNL2Q8IZJ0 200 aa19.24■□□□□ 0.67
COL9A2-208ENST00000488463 DIAPH1O60610 1272 aaKnown RBP19.23■□□□□ 0.67
COL9A2-208ENST00000488463 PPP2R1AP30153 589 aa19.22■□□□□ 0.67
COL9A2-208ENST00000488463 KDM6AO15550 1401 aaPredicted RBP19.21■□□□□ 0.67
COL9A2-208ENST00000488463 SLC15A2Q16348 729 aa19.21■□□□□ 0.67
COL9A2-208ENST00000488463 AMOTQ4VCS5 1084 aa19.21■□□□□ 0.67
COL9A2-208ENST00000488463 PLEKHO1Q53GL0 409 aaPredicted RBP19.21■□□□□ 0.67
COL9A2-208ENST00000488463 SLC27A3Q5K4L6 730 aa19.21■□□□□ 0.67
COL9A2-208ENST00000488463 PIGBQ92521 554 aa19.21■□□□□ 0.67
COL9A2-208ENST00000488463 PDGFDQ9GZP0 370 aaPredicted RBP19.21■□□□□ 0.67
COL9A2-208ENST00000488463 KCNQ4P56696 695 aa19.2■□□□□ 0.66
COL9A2-208ENST00000488463 ZNF827Q17R98 1081 aa19.2■□□□□ 0.66
COL9A2-208ENST00000488463 MPRIPQ6WCQ1 1025 aa19.2■□□□□ 0.66
COL9A2-208ENST00000488463 TUBGCP6Q96RT7 1819 aa19.2■□□□□ 0.66
COL9A2-208ENST00000488463 TAF1LQ8IZX4 1826 aa19.19■□□□□ 0.66
COL9A2-208ENST00000488463 HMOX1P09601 288 aa19.19■□□□□ 0.66
COL9A2-208ENST00000488463 AKT1S1Q96B36 256 aa19.19■□□□□ 0.66
COL9A2-208ENST00000488463 QSER1Q2KHR3 1735 aa19.19■□□□□ 0.66
COL9A2-208ENST00000488463 ZNF530Q6P9A1 599 aaPredicted RBP19.18■□□□□ 0.66
COL9A2-208ENST00000488463 PALLDQ8WX93 1383 aa19.18■□□□□ 0.66
COL9A2-208ENST00000488463 SCN11AQ9UI33 1791 aa19.17■□□□□ 0.66
COL9A2-208ENST00000488463 STK32BQ9NY57 414 aa19.17■□□□□ 0.66
COL9A2-208ENST00000488463 C5P01031 1676 aa19.17■□□□□ 0.66
COL9A2-208ENST00000488463 ADAMTS7Q9UKP4 1686 aa19.17■□□□□ 0.66
COL9A2-208ENST00000488463 DCAF5Q96JK2 942 aa19.16■□□□□ 0.66
COL9A2-208ENST00000488463 VIRMAQ69YN4 1812 aaKnown RBP19.16■□□□□ 0.66
COL9A2-208ENST00000488463 ERVV-2B6SEH9 535 aa19.15■□□□□ 0.66
COL9A2-208ENST00000488463 ZEB1P37275 1124 aaPredicted RBP19.15■□□□□ 0.66
COL9A2-208ENST00000488463 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
COL9A2-208ENST00000488463 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
COL9A2-208ENST00000488463 HSP90AB1P08238 724 aaKnown RBP19.14■□□□□ 0.65
COL9A2-208ENST00000488463 TMOD3Q9NYL9 352 aa19.14■□□□□ 0.65
COL9A2-208ENST00000488463 ASAP1Q9ULH1 1129 aa19.14■□□□□ 0.65
COL9A2-208ENST00000488463 ATG3Q9NT62 314 aa19.13■□□□□ 0.65
COL9A2-208ENST00000488463 MTHFSDQ2M296 383 aaKnown RBP19.12■□□□□ 0.65
COL9A2-208ENST00000488463 AKAP4Q5JQC9 854 aa19.12■□□□□ 0.65
COL9A2-208ENST00000488463 SMARCC1Q92922 1105 aaPredicted RBP19.12■□□□□ 0.65
COL9A2-208ENST00000488463 ZNF831Q5JPB2 1677 aa19.11■□□□□ 0.65
COL9A2-208ENST00000488463 MRC1P22897 1456 aa19.11■□□□□ 0.65
COL9A2-208ENST00000488463 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
COL9A2-208ENST00000488463 C1orf141Q5JVX7 400 aa19.11■□□□□ 0.65
COL9A2-208ENST00000488463 CFAP53Q96M91 514 aa19.11■□□□□ 0.65
COL9A2-208ENST00000488463 RSPH6AQ9H0K4 717 aa19.11■□□□□ 0.65
COL9A2-208ENST00000488463 COL24A1Q17RW2 1714 aa19.11■□□□□ 0.65
COL9A2-208ENST00000488463 PNPLA7Q6ZV29 1317 aa19.1■□□□□ 0.65
COL9A2-208ENST00000488463 C4BP0C0L5 1744 aa19.1■□□□□ 0.65
COL9A2-208ENST00000488463 PTGER2P43116 358 aa19.09■□□□□ 0.65
COL9A2-208ENST00000488463 SLC4A9Q96Q91 983 aa19.09■□□□□ 0.65
COL9A2-208ENST00000488463 LGR6Q9HBX8 967 aa19.09■□□□□ 0.65
COL9A2-208ENST00000488463 SPON1Q9HCB6 807 aa19.09■□□□□ 0.65
COL9A2-208ENST00000488463 LOC102724428A0A0B4J2F2 783 aa19.08■□□□□ 0.64
COL9A2-208ENST00000488463 ZBTB7AO95365 584 aa19.08■□□□□ 0.64
COL9A2-208ENST00000488463 SIK1P57059 783 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms