RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 NR3C2P08235 984 aa8.6□□□□□ -1.03
ITGB1-214ENST00000488427 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
ITGB1-214ENST00000488427 ITPKCQ96DU7 683 aa8.6□□□□□ -1.03
ITGB1-214ENST00000488427 CCDC97Q96F63 343 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-214ENST00000488427 ZFAND3Q9H8U3 227 aa8.6□□□□□ -1.03
ITGB1-214ENST00000488427 CC2D2BQ6DHV5 1058 aa8.59□□□□□ -1.03
ITGB1-214ENST00000488427 EML3Q32P44 896 aa8.58□□□□□ -1.04
ITGB1-214ENST00000488427 CYP2U1Q7Z449 544 aa8.58□□□□□ -1.04
ITGB1-214ENST00000488427 PLPP7Q8NBV4 271 aa8.58□□□□□ -1.04
ITGB1-214ENST00000488427 ZNF777Q9ULD5 760 aaPredicted RBP8.58□□□□□ -1.04
ITGB1-214ENST00000488427 BMP2P12643 396 aa8.57□□□□□ -1.04
ITGB1-214ENST00000488427 SKIP12755 728 aa8.57□□□□□ -1.04
ITGB1-214ENST00000488427 TSEN34Q9BSV6 310 aaKnown RBP8.57□□□□□ -1.04
ITGB1-214ENST00000488427 SERPINA10Q9UK55 444 aa8.57□□□□□ -1.04
ITGB1-214ENST00000488427 ERVK-9P63128 1117 aa8.56□□□□□ -1.04
ITGB1-214ENST00000488427 TRIM50Q86XT4 487 aa8.56□□□□□ -1.04
ITGB1-214ENST00000488427 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
ITGB1-214ENST00000488427 PHTF2Q8N3S3 785 aa8.56□□□□□ -1.04
ITGB1-214ENST00000488427 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-214ENST00000488427 CHIC2Q9UKJ5 165 aa8.56□□□□□ -1.04
ITGB1-214ENST00000488427 ATP9BO43861 1147 aa8.55□□□□□ -1.04
ITGB1-214ENST00000488427 OXLD1Q5BKU9 147 aa8.55□□□□□ -1.04
ITGB1-214ENST00000488427 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
ITGB1-214ENST00000488427 CYLDQ9NQC7 956 aa8.55□□□□□ -1.04
ITGB1-214ENST00000488427 NOD1Q9Y239 953 aa8.55□□□□□ -1.04
ITGB1-214ENST00000488427 PPFIA3O75145 1194 aa8.54□□□□□ -1.04
ITGB1-214ENST00000488427 ADH1AP07327 375 aa8.54□□□□□ -1.04
ITGB1-214ENST00000488427 Q6ZVU0 165 aa8.54□□□□□ -1.04
ITGB1-214ENST00000488427 PLEKHM2Q8IWE5 1019 aa8.54□□□□□ -1.04
ITGB1-214ENST00000488427 USP17L5A8MUK1 530 aa8.53□□□□□ -1.04
ITGB1-214ENST00000488427 ATP1A2P50993 1020 aa8.53□□□□□ -1.04
ITGB1-214ENST00000488427 ESCO1Q5FWF5 840 aa8.53□□□□□ -1.04
ITGB1-214ENST00000488427 TMPRSS4Q9NRS4 437 aa8.53□□□□□ -1.04
ITGB1-214ENST00000488427 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
ITGB1-214ENST00000488427 ATP5J2-PTCD1G3V325 749 aa8.52□□□□□ -1.05
ITGB1-214ENST00000488427 ADAMTS19Q8TE59 1207 aa8.52□□□□□ -1.05
ITGB1-214ENST00000488427 CCDC85AQ96PX6 553 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-214ENST00000488427 PPP1R12CQ9BZL4 782 aa8.52□□□□□ -1.05
ITGB1-214ENST00000488427 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
ITGB1-214ENST00000488427 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-214ENST00000488427 GNRH1P01148 92 aa8.51□□□□□ -1.05
ITGB1-214ENST00000488427 USP17L3A6NCW0 530 aa8.5□□□□□ -1.05
ITGB1-214ENST00000488427 USP17L4A6NCW7 530 aa8.5□□□□□ -1.05
ITGB1-214ENST00000488427 LILRA1O75019 489 aa8.5□□□□□ -1.05
ITGB1-214ENST00000488427 USP17L2Q6R6M4 530 aa8.5□□□□□ -1.05
ITGB1-214ENST00000488427 USP17L1Q7RTZ2 530 aa8.5□□□□□ -1.05
ITGB1-214ENST00000488427 DNMT3LQ9UJW3 386 aa8.5□□□□□ -1.05
ITGB1-214ENST00000488427 PALM3A6NDB9 673 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-214ENST00000488427 GTF2E1P29083 439 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-214ENST00000488427 NCOA4Q13772 614 aa8.49□□□□□ -1.05
ITGB1-214ENST00000488427 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
ITGB1-214ENST00000488427 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
ITGB1-214ENST00000488427 PIK3CDO00329 1044 aa8.48□□□□□ -1.05
ITGB1-214ENST00000488427 PTGIRP43119 386 aa8.48□□□□□ -1.05
ITGB1-214ENST00000488427 PSME1Q06323 249 aa8.48□□□□□ -1.05
ITGB1-214ENST00000488427 CBLBQ13191 982 aa8.48□□□□□ -1.05
ITGB1-214ENST00000488427 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.48□□□□□ -1.05
ITGB1-214ENST00000488427 TBC1D9Q6ZT07 1266 aa8.48□□□□□ -1.05
ITGB1-214ENST00000488427 UCN2Q96RP3 112 aa8.48□□□□□ -1.05
ITGB1-214ENST00000488427 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-214ENST00000488427 RELBQ01201 579 aa8.47□□□□□ -1.05
ITGB1-214ENST00000488427 KCNMA1Q12791 1236 aa8.47□□□□□ -1.05
ITGB1-214ENST00000488427 LARP1Q6PKG0 1096 aaKnown RBP8.47□□□□□ -1.05
ITGB1-214ENST00000488427 TTLL8A6PVC2 850 aa8.46□□□□□ -1.06
ITGB1-214ENST00000488427 SPINT1O43278 529 aa8.46□□□□□ -1.06
ITGB1-214ENST00000488427 LMOD1P29536 600 aaPredicted RBP8.46□□□□□ -1.06
ITGB1-214ENST00000488427 SCTRP47872 440 aa8.46□□□□□ -1.06
ITGB1-214ENST00000488427 GTF2IP78347 998 aa8.46□□□□□ -1.06
ITGB1-214ENST00000488427 CDCA7Q9BWT1 371 aaPredicted RBP8.46□□□□□ -1.06
ITGB1-214ENST00000488427 OSBPL3Q9H4L5 887 aa8.46□□□□□ -1.06
ITGB1-214ENST00000488427 VRTNQ9H8Y1 702 aa8.46□□□□□ -1.06
ITGB1-214ENST00000488427 BACH1O14867 736 aa8.45□□□□□ -1.06
ITGB1-214ENST00000488427 GPC1P35052 558 aa8.45□□□□□ -1.06
ITGB1-214ENST00000488427 CLN3Q13286 438 aa8.45□□□□□ -1.06
ITGB1-214ENST00000488427 POLMQ9NP87 494 aaPredicted RBP8.45□□□□□ -1.06
ITGB1-214ENST00000488427 MKRN1Q9UHC7 482 aaKnown RBP8.45□□□□□ -1.06
ITGB1-214ENST00000488427 ARID3CA6NKF2 412 aa8.44□□□□□ -1.06
ITGB1-214ENST00000488427 MEN1O00255 615 aa8.44□□□□□ -1.06
ITGB1-214ENST00000488427 ADD1P35611 737 aaKnown RBP8.44□□□□□ -1.06
ITGB1-214ENST00000488427 PTSQ03393 145 aa8.44□□□□□ -1.06
ITGB1-214ENST00000488427 DEPDC4Q8N2C3 294 aa8.44□□□□□ -1.06
ITGB1-214ENST00000488427 LARGE2Q8N3Y3 721 aa8.44□□□□□ -1.06
ITGB1-214ENST00000488427 CNTNAP3BQ96NU0 1288 aa8.44□□□□□ -1.06
ITGB1-214ENST00000488427 CNTNAP3Q9BZ76 1288 aa8.44□□□□□ -1.06
ITGB1-214ENST00000488427 WASLO00401 505 aaPredicted RBP8.43□□□□□ -1.06
ITGB1-214ENST00000488427 CCDC82Q8N4S0 544 aa8.43□□□□□ -1.06
ITGB1-214ENST00000488427 AGBL1Q96MI9 1066 aa8.43□□□□□ -1.06
ITGB1-214ENST00000488427 ARHGEF10LQ9HCE6 1279 aa8.43□□□□□ -1.06
ITGB1-214ENST00000488427 DNAAF2Q9NVR5 837 aaKnown RBP8.43□□□□□ -1.06
ITGB1-214ENST00000488427 LOC100996750A0A140TA64 210 aa8.42□□□□□ -1.06
ITGB1-214ENST00000488427 A0A1W2PRU2 124 aa8.42□□□□□ -1.06
ITGB1-214ENST00000488427 RNF225M0QZC1 329 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-214ENST00000488427 PPP1R15AO75807 674 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-214ENST00000488427 RASA1P20936 1047 aa8.42□□□□□ -1.06
ITGB1-214ENST00000488427 TSGA10IPQ3SY00 556 aa8.42□□□□□ -1.06
ITGB1-214ENST00000488427 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
ITGB1-214ENST00000488427 NBPF15Q8N660 670 aa8.42□□□□□ -1.06
ITGB1-214ENST00000488427 GPR161Q8N6U8 529 aaKnown RBP8.42□□□□□ -1.06
ITGB1-214ENST00000488427 ESYT1Q9BSJ8 1104 aa8.42□□□□□ -1.06
ITGB1-214ENST00000488427 KRTAP4-6Q9BYQ5 205 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms