RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 CEP350Q5VT06 3117 aa15.41■□□□□ 0.06
LCN2-206ENST00000488391 COL23A1Q86Y22 540 aaPredicted RBP15.41■□□□□ 0.06
LCN2-206ENST00000488391 CD163L1Q9NR16 1453 aa15.4■□□□□ 0.06
LCN2-206ENST00000488391 QSER1Q2KHR3 1735 aa15.4■□□□□ 0.06
LCN2-206ENST00000488391 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
LCN2-206ENST00000488391 CCNL1Q9UK58 526 aaPredicted RBP15.4■□□□□ 0.06
LCN2-206ENST00000488391 TUBGCP6Q96RT7 1819 aa15.4■□□□□ 0.06
LCN2-206ENST00000488391 COL24A1Q17RW2 1714 aa15.4■□□□□ 0.06
LCN2-206ENST00000488391 SHANK3Q9BYB0 1731 aa15.4■□□□□ 0.06
LCN2-206ENST00000488391 GOLGB1Q14789 3259 aaKnown RBP15.39■□□□□ 0.05
LCN2-206ENST00000488391 FBLN1P23142 703 aa15.39■□□□□ 0.05
LCN2-206ENST00000488391 ZCRB1Q8TBF4 217 aaKnown RBP15.39■□□□□ 0.05
LCN2-206ENST00000488391 ANKRD36BQ8N2N9 1353 aa15.38■□□□□ 0.05
LCN2-206ENST00000488391 TERF2IPQ9NYB0 399 aa15.38■□□□□ 0.05
LCN2-206ENST00000488391 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
LCN2-206ENST00000488391 EDC4Q6P2E9 1401 aaKnown RBP15.37■□□□□ 0.05
LCN2-206ENST00000488391 USP54Q70EL1 1684 aa15.37■□□□□ 0.05
LCN2-206ENST00000488391 NSD2O96028 1365 aa15.36■□□□□ 0.05
LCN2-206ENST00000488391 AMPHP49418 695 aa15.36■□□□□ 0.05
LCN2-206ENST00000488391 CARD11Q9BXL7 1154 aa15.36■□□□□ 0.05
LCN2-206ENST00000488391 ATP10DQ9P241 1426 aa15.35■□□□□ 0.05
LCN2-206ENST00000488391 HOXC9P31274 260 aa15.35■□□□□ 0.05
LCN2-206ENST00000488391 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
LCN2-206ENST00000488391 GPBP1L1Q9HC44 474 aaPredicted RBP15.35■□□□□ 0.05
LCN2-206ENST00000488391 MAP3K19Q56UN5 1328 aa15.35■□□□□ 0.05
LCN2-206ENST00000488391 A0A1W2PP64 1363 aa15.35■□□□□ 0.05
LCN2-206ENST00000488391 LY75O60449 1722 aa15.34■□□□□ 0.05
LCN2-206ENST00000488391 DOT1LQ8TEK3 1739 aa15.34■□□□□ 0.05
LCN2-206ENST00000488391 COG3Q96JB2 828 aa15.34■□□□□ 0.05
LCN2-206ENST00000488391 USP47Q96K76 1375 aa15.34■□□□□ 0.05
LCN2-206ENST00000488391 RGPD2P0DJD1 1756 aa15.33■□□□□ 0.04
LCN2-206ENST00000488391 NBPF6Q5VWK0 638 aa15.32■□□□□ 0.04
LCN2-206ENST00000488391 USHBP1Q8N6Y0 703 aa15.32■□□□□ 0.04
LCN2-206ENST00000488391 NBPF4Q96M43 638 aa15.32■□□□□ 0.04
LCN2-206ENST00000488391 WWC3Q9ULE0 1092 aa15.32■□□□□ 0.04
LCN2-206ENST00000488391 CD2APQ9Y5K6 639 aa15.32■□□□□ 0.04
LCN2-206ENST00000488391 MEGF6O75095 1541 aa15.31■□□□□ 0.04
LCN2-206ENST00000488391 HSPA6P17066 643 aa15.3■□□□□ 0.04
LCN2-206ENST00000488391 FAM208AQ9UK61 1670 aaKnown RBP15.3■□□□□ 0.04
LCN2-206ENST00000488391 RRS1Q15050 365 aaKnown RBP15.29■□□□□ 0.04
LCN2-206ENST00000488391 SMIM5Q71RC9 77 aa15.29■□□□□ 0.04
LCN2-206ENST00000488391 FLAD1Q8NFF5 587 aa15.29■□□□□ 0.04
LCN2-206ENST00000488391 RAPGEF4Q8WZA2 1011 aa15.29■□□□□ 0.04
LCN2-206ENST00000488391 MPRIPQ6WCQ1 1025 aa15.28■□□□□ 0.04
LCN2-206ENST00000488391 PUS7Q96PZ0 661 aaKnown RBP15.28■□□□□ 0.04
LCN2-206ENST00000488391 TATP17735 454 aaPredicted RBP15.27■□□□□ 0.04
LCN2-206ENST00000488391 PHF14O94880 888 aa15.26■□□□□ 0.03
LCN2-206ENST00000488391 AMIGO3Q86WK7 504 aa15.26■□□□□ 0.03
LCN2-206ENST00000488391 PALLDQ8WX93 1383 aa15.25■□□□□ 0.03
LCN2-206ENST00000488391 CGNL1Q0VF96 1302 aa15.25■□□□□ 0.03
LCN2-206ENST00000488391 IGSF1Q8N6C5 1336 aa15.25■□□□□ 0.03
LCN2-206ENST00000488391 AK7Q96M32 723 aa15.25■□□□□ 0.03
LCN2-206ENST00000488391 GGNBP2Q9H3C7 697 aa15.25■□□□□ 0.03
LCN2-206ENST00000488391 ADCY9O60503 1353 aa15.24■□□□□ 0.03
LCN2-206ENST00000488391 HMGB2P26583 209 aaKnown RBP15.24■□□□□ 0.03
LCN2-206ENST00000488391 C5P01031 1676 aa15.24■□□□□ 0.03
LCN2-206ENST00000488391 TAF1LQ8IZX4 1826 aa15.23■□□□□ 0.03
LCN2-206ENST00000488391 ST20-MTHFSA0A0A6YYL1 179 aa15.23■□□□□ 0.03
LCN2-206ENST00000488391 FYB1O15117 783 aa15.23■□□□□ 0.03
LCN2-206ENST00000488391 CYP27B1O15528 508 aa15.23■□□□□ 0.03
LCN2-206ENST00000488391 HSP90AB2PQ58FF8 381 aa15.23■□□□□ 0.03
LCN2-206ENST00000488391 TESK2Q96S53 571 aa15.23■□□□□ 0.03
LCN2-206ENST00000488391 PCDH11XQ9BZA7 1347 aa15.22■□□□□ 0.03
LCN2-206ENST00000488391 PCDH11YQ9BZA8 1340 aa15.22■□□□□ 0.03
LCN2-206ENST00000488391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.22■□□□□ 0.03
LCN2-206ENST00000488391 KIF3CO14782 793 aa15.22■□□□□ 0.03
LCN2-206ENST00000488391 SMARCC1Q92922 1105 aaPredicted RBP15.22■□□□□ 0.03
LCN2-206ENST00000488391 PIGBQ92521 554 aa15.21■□□□□ 0.03
LCN2-206ENST00000488391 RTL1A6NKG5 1358 aa15.21■□□□□ 0.02
LCN2-206ENST00000488391 SMG6Q86US8 1419 aaKnown RBP15.2■□□□□ 0.02
LCN2-206ENST00000488391 C4BP0C0L5 1744 aa15.19■□□□□ 0.02
LCN2-206ENST00000488391 ITGB4P16144 1822 aa15.18■□□□□ 0.02
LCN2-206ENST00000488391 LINC00116Q8NCU8 138 aa15.18■□□□□ 0.02
LCN2-206ENST00000488391 INSRP06213 1382 aa15.18■□□□□ 0.02
LCN2-206ENST00000488391 LOC102724428A0A0B4J2F2 783 aa15.17■□□□□ 0.02
LCN2-206ENST00000488391 SSFA2P28290 1259 aa15.17■□□□□ 0.02
LCN2-206ENST00000488391 SIK1P57059 783 aa15.17■□□□□ 0.02
LCN2-206ENST00000488391 UBR3Q6ZT12 1888 aa15.16■□□□□ 0.02
LCN2-206ENST00000488391 APLP1P51693 650 aa15.16■□□□□ 0.02
LCN2-206ENST00000488391 ASAP1Q9ULH1 1129 aa15.16■□□□□ 0.02
LCN2-206ENST00000488391 TOGARAM1Q9Y4F4 1720 aa15.15■□□□□ 0.02
LCN2-206ENST00000488391 ZNF316A6NFI3 1004 aaPredicted RBP15.15■□□□□ 0.02
LCN2-206ENST00000488391 GNPATO15228 680 aa15.15■□□□□ 0.02
LCN2-206ENST00000488391 SLC24A1O60721 1099 aa15.15■□□□□ 0.02
LCN2-206ENST00000488391 MMP10P09238 476 aa15.15■□□□□ 0.02
LCN2-206ENST00000488391 ITPK1Q13572 414 aa15.15■□□□□ 0.02
LCN2-206ENST00000488391 FLT4P35916 1363 aa15.14■□□□□ 0.01
LCN2-206ENST00000488391 A0A0G2JLW4 131 aa15.14■□□□□ 0.01
LCN2-206ENST00000488391 PPM1GO15355 546 aaPredicted RBP15.14■□□□□ 0.01
LCN2-206ENST00000488391 ATP6V1AP38606 617 aa15.14■□□□□ 0.01
LCN2-206ENST00000488391 NKX1-1Q15270 411 aaPredicted RBP15.14■□□□□ 0.01
LCN2-206ENST00000488391 ARHGAP27Q6ZUM4 889 aa15.14■□□□□ 0.01
LCN2-206ENST00000488391 DNAJC5GQ8N7S2 189 aa15.14■□□□□ 0.01
LCN2-206ENST00000488391 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
LCN2-206ENST00000488391 BCS1LQ9Y276 419 aa15.14■□□□□ 0.01
LCN2-206ENST00000488391 EMILIN1Q9Y6C2 1016 aa15.14■□□□□ 0.01
LCN2-206ENST00000488391 NSD3Q9BZ95 1437 aa15.14■□□□□ 0.01
LCN2-206ENST00000488391 TOMM70O94826 608 aa15.13■□□□□ 0.01
LCN2-206ENST00000488391 TMOD3Q9NYL9 352 aa15.13■□□□□ 0.01
LCN2-206ENST00000488391 NMRK2Q9NPI5 230 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms