RNA–Protein interactions for RNA: ENST00000488340.5

CCNL2-216, Transcript of cyclin L2, human

TSL 2

Gene CCNL2, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL2-216	ENST00000488340	WNK3	Q9BYP7	1800 aa		28.95	■■■□□ 2.23
CCNL2-216	ENST00000488340	TAT	P17735	454 aa	Predicted RBP	28.95	■■■□□ 2.22
CCNL2-216	ENST00000488340	AMOT	Q4VCS5	1084 aa		28.95	■■■□□ 2.22
CCNL2-216	ENST00000488340	PKD1L3	Q7Z443	1732 aa		28.95	■■■□□ 2.22
CCNL2-216	ENST00000488340	OVOS2	A0A0G2JMS6	1433 aa		28.93	■■■□□ 2.22
CCNL2-216	ENST00000488340	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.92	■■■□□ 2.22
CCNL2-216	ENST00000488340	WWC1	Q8IX03	1113 aa		28.92	■■■□□ 2.22
CCNL2-216	ENST00000488340	LMOD3	Q0VAK6	560 aa		28.92	■■■□□ 2.22
CCNL2-216	ENST00000488340	USP35	Q9P2H5	1018 aa		28.92	■■■□□ 2.22
CCNL2-216	ENST00000488340	IL2RB	P14784	551 aa		28.91	■■■□□ 2.22
CCNL2-216	ENST00000488340	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.91	■■■□□ 2.22	4e-12	■□□□□ 10.8
CCNL2-216	ENST00000488340	USP21	Q9UK80	565 aa		28.91	■■■□□ 2.22
CCNL2-216	ENST00000488340	TRIM35	Q9UPQ4	493 aa		28.91	■■■□□ 2.22
CCNL2-216	ENST00000488340	SPATA31A1	Q5TZJ5	1347 aa		28.91	■■■□□ 2.22
CCNL2-216	ENST00000488340	SPATA31A5	Q5VU36	1347 aa		28.9	■■■□□ 2.22
CCNL2-216	ENST00000488340	SPATA31A7	Q8IWB4	1347 aa		28.9	■■■□□ 2.22
CCNL2-216	ENST00000488340	PDE3B	Q13370	1112 aa		28.89	■■■□□ 2.22
CCNL2-216	ENST00000488340	VPS72	Q15906	364 aa		28.89	■■■□□ 2.22
CCNL2-216	ENST00000488340	THRAP3	Q9Y2W1	955 aa	Known RBP	28.89	■■■□□ 2.22
CCNL2-216	ENST00000488340	AFF2	P51816	1311 aa		28.88	■■■□□ 2.21
CCNL2-216	ENST00000488340	DISP2	A7MBM2	1401 aa		28.88	■■■□□ 2.21
CCNL2-216	ENST00000488340	CENPB	P07199	599 aa	Predicted RBP	28.87	■■■□□ 2.21
CCNL2-216	ENST00000488340	SPG7	Q9UQ90	795 aa		28.87	■■■□□ 2.21
CCNL2-216	ENST00000488340	MAP3K5	Q99683	1374 aa		28.86	■■■□□ 2.21
CCNL2-216	ENST00000488340	WDR63	Q8IWG1	891 aa		28.86	■■■□□ 2.21
CCNL2-216	ENST00000488340	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.85	■■■□□ 2.21
CCNL2-216	ENST00000488340	CCDC9	Q9Y3X0	531 aa	Known RBP	28.85	■■■□□ 2.21
CCNL2-216	ENST00000488340	GNAT3	A8MTJ3	354 aa		28.84	■■■□□ 2.21
CCNL2-216	ENST00000488340	HTATSF1	O43719	755 aa	Known RBP	28.84	■■■□□ 2.21
CCNL2-216	ENST00000488340	GOLGA2	Q08379	1002 aa		28.84	■■■□□ 2.21
CCNL2-216	ENST00000488340	SHANK3	Q9BYB0	1731 aa		28.83	■■■□□ 2.21
CCNL2-216	ENST00000488340	AKAP4	Q5JQC9	854 aa		28.83	■■■□□ 2.21
CCNL2-216	ENST00000488340	RTF1	Q92541	710 aa	Known RBP	28.83	■■■□□ 2.21
CCNL2-216	ENST00000488340	CDCA7	Q9BWT1	371 aa	Predicted RBP	28.83	■■■□□ 2.21
CCNL2-216	ENST00000488340	C1orf141	Q5JVX7	400 aa		28.82	■■■□□ 2.2
CCNL2-216	ENST00000488340	BARGIN	Q6ZT62	677 aa		28.82	■■■□□ 2.2
CCNL2-216	ENST00000488340	ATRN	O75882	1429 aa		28.81	■■■□□ 2.2
CCNL2-216	ENST00000488340	LRRC37A3	O60309	1634 aa		28.8	■■■□□ 2.2
CCNL2-216	ENST00000488340	CALD1	Q05682	793 aa	Known RBP	28.8	■■■□□ 2.2
CCNL2-216	ENST00000488340	ZCRB1	Q8TBF4	217 aa	Known RBP	28.8	■■■□□ 2.2
CCNL2-216	ENST00000488340	PCDH11X	Q9BZA7	1347 aa		28.8	■■■□□ 2.2
CCNL2-216	ENST00000488340	PCDH11Y	Q9BZA8	1340 aa		28.8	■■■□□ 2.2
CCNL2-216	ENST00000488340	VIRMA	Q69YN4	1812 aa	Known RBP	28.8	■■■□□ 2.2
CCNL2-216	ENST00000488340	IL16	Q14005	1332 aa		28.79	■■■□□ 2.2
CCNL2-216	ENST00000488340	CDCA7L	Q96GN5	454 aa		28.79	■■■□□ 2.2
CCNL2-216	ENST00000488340	TRPC5	Q9UL62	973 aa	Predicted RBP	28.79	■■■□□ 2.2
CCNL2-216	ENST00000488340	ADAMTS7	Q9UKP4	1686 aa		28.78	■■■□□ 2.2
CCNL2-216	ENST00000488340	IFNL2	Q8IZJ0	200 aa		28.78	■■■□□ 2.2
CCNL2-216	ENST00000488340		E9PSI1	815 aa		28.77	■■■□□ 2.2
CCNL2-216	ENST00000488340	PHKG2	P15735	406 aa		28.77	■■■□□ 2.2
CCNL2-216	ENST00000488340	DCTN1	Q14203	1278 aa		28.77	■■■□□ 2.2
CCNL2-216	ENST00000488340	MCM10	Q7L590	875 aa		28.77	■■■□□ 2.2
CCNL2-216	ENST00000488340	THUMPD2	Q9BTF0	503 aa	Known RBP	28.77	■■■□□ 2.2
CCNL2-216	ENST00000488340	GLI3	P10071	1580 aa		28.77	■■■□□ 2.2
CCNL2-216	ENST00000488340	TNS2	Q63HR2	1409 aa		28.76	■■■□□ 2.19
CCNL2-216	ENST00000488340	CYP27B1	O15528	508 aa		28.75	■■■□□ 2.19
CCNL2-216	ENST00000488340	SLFN5	Q08AF3	891 aa		28.75	■■■□□ 2.19
CCNL2-216	ENST00000488340	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.75	■■■□□ 2.19
CCNL2-216	ENST00000488340	SCN11A	Q9UI33	1791 aa		28.74	■■■□□ 2.19
CCNL2-216	ENST00000488340	CEMIP	Q8WUJ3	1361 aa		28.74	■■■□□ 2.19
CCNL2-216	ENST00000488340	GJD4	Q96KN9	370 aa	Predicted RBP	28.74	■■■□□ 2.19
CCNL2-216	ENST00000488340	IL17RE	Q8NFR9	667 aa		28.73	■■■□□ 2.19
CCNL2-216	ENST00000488340	HSP90AB1	P08238	724 aa	Known RBP	28.72	■■■□□ 2.19
CCNL2-216	ENST00000488340	TRMT2A	Q8IZ69	625 aa	Known RBP	28.72	■■■□□ 2.19
CCNL2-216	ENST00000488340	THSD7A	Q9UPZ6	1657 aa		28.72	■■■□□ 2.19
CCNL2-216	ENST00000488340	EXOC5	O00471	708 aa		28.71	■■■□□ 2.19
CCNL2-216	ENST00000488340	FAM98C	Q17RN3	349 aa	Known RBP	28.71	■■■□□ 2.19
CCNL2-216	ENST00000488340	MYH16	Q9H6N6	1097 aa		28.71	■■■□□ 2.19
CCNL2-216	ENST00000488340	ZNF772	Q68DY9	489 aa	Predicted RBP	28.71	■■■□□ 2.19
CCNL2-216	ENST00000488340	MPRIP	Q6WCQ1	1025 aa		28.71	■■■□□ 2.19
CCNL2-216	ENST00000488340	IFT57	Q9NWB7	429 aa		28.71	■■■□□ 2.19
CCNL2-216	ENST00000488340	DDB1	Q16531	1140 aa		28.7	■■■□□ 2.18
CCNL2-216	ENST00000488340	DUSP27	Q5VZP5	1158 aa		28.7	■■■□□ 2.18
CCNL2-216	ENST00000488340	QTRT2	Q9H974	415 aa	Known RBP	28.7	■■■□□ 2.18
CCNL2-216	ENST00000488340	KDM6A	O15550	1401 aa	Predicted RBP	28.7	■■■□□ 2.18
CCNL2-216	ENST00000488340	GNAI1	P63096	354 aa		28.69	■■■□□ 2.18
CCNL2-216	ENST00000488340	DCAF5	Q96JK2	942 aa		28.69	■■■□□ 2.18
CCNL2-216	ENST00000488340	RNMT	O43148	476 aa	Known RBP	28.68	■■■□□ 2.18
CCNL2-216	ENST00000488340	DDX54	Q8TDD1	881 aa	Known RBP	28.68	■■■□□ 2.18
CCNL2-216	ENST00000488340	CFAP44	Q96MT7	982 aa		28.68	■■■□□ 2.18
CCNL2-216	ENST00000488340	LGR6	Q9HBX8	967 aa		28.68	■■■□□ 2.18
CCNL2-216	ENST00000488340	ZNF853	P0CG23	659 aa		28.67	■■■□□ 2.18
CCNL2-216	ENST00000488340	NKX1-1	Q15270	411 aa	Predicted RBP	28.67	■■■□□ 2.18
CCNL2-216	ENST00000488340	SIPA1L3	O60292	1781 aa	Predicted RBP	28.67	■■■□□ 2.18
CCNL2-216	ENST00000488340	MRC1	P22897	1456 aa		28.66	■■■□□ 2.18
CCNL2-216	ENST00000488340	FANCI	Q9NVI1	1328 aa		28.65	■■■□□ 2.18
CCNL2-216	ENST00000488340	LAS1L	Q9Y4W2	734 aa	Known RBP	28.65	■■■□□ 2.18
CCNL2-216	ENST00000488340	TEF	Q10587	303 aa		28.64	■■■□□ 2.18
CCNL2-216	ENST00000488340	ONECUT3	O60422	494 aa	Predicted RBP	28.62	■■■□□ 2.17
CCNL2-216	ENST00000488340	TSR2	Q969E8	191 aa	Known RBP	28.62	■■■□□ 2.17
CCNL2-216	ENST00000488340	CHL1	O00533	1208 aa		28.62	■■■□□ 2.17
CCNL2-216	ENST00000488340	BABAM1	Q9NWV8	329 aa		28.62	■■■□□ 2.17
CCNL2-216	ENST00000488340	TOGARAM1	Q9Y4F4	1720 aa		28.61	■■■□□ 2.17
CCNL2-216	ENST00000488340	TAF7	Q15545	349 aa	Predicted RBP	28.61	■■■□□ 2.17
CCNL2-216	ENST00000488340	MBIP	Q9NS73	344 aa		28.61	■■■□□ 2.17
CCNL2-216	ENST00000488340		A0A0G2JS52	829 aa		28.6	■■■□□ 2.17
CCNL2-216	ENST00000488340	MYT1	Q01538	1121 aa		28.6	■■■□□ 2.17
CCNL2-216	ENST00000488340	KDM3B	Q7LBC6	1761 aa		28.59	■■■□□ 2.17
CCNL2-216	ENST00000488340	SLC52A2	Q9HAB3	445 aa		28.58	■■■□□ 2.17
CCNL2-216	ENST00000488340	TSPYL4	Q9UJ04	414 aa		28.58	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms